RNA–Protein interactions for RNA: ENST00000553256.5

PTCH1-227, Transcript of patched 1, humanhuman

TSL 4

Gene PTCH1, Length 537 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-227ENST00000553256 MPC2O95563 127 aa13.88□□□□□ -0.19
PTCH1-227ENST00000553256 IGKV3-20P01619 116 aa13.88□□□□□ -0.19
PTCH1-227ENST00000553256 PSG9Q00887 426 aa13.88□□□□□ -0.19
PTCH1-227ENST00000553256 LRRC37A5PQ49AS3 106 aa13.88□□□□□ -0.19
PTCH1-227ENST00000553256 C1orf158Q8N1D5 194 aa13.88□□□□□ -0.19
PTCH1-227ENST00000553256 OR5C1Q8NGR4 320 aa13.88□□□□□ -0.19
PTCH1-227ENST00000553256 ZNF331Q9NQX6 463 aaPredicted RBP13.88□□□□□ -0.19
PTCH1-227ENST00000553256 TRAV5A0A0B4J249 113 aa13.87□□□□□ -0.19
PTCH1-227ENST00000553256 CXorf65A6NEN9 183 aa13.87□□□□□ -0.19
PTCH1-227ENST00000553256 H3BQ15 152 aa13.87□□□□□ -0.19
PTCH1-227ENST00000553256 CRXO43186 299 aaPredicted RBP13.87□□□□□ -0.19
PTCH1-227ENST00000553256 PTTG1O95997 202 aa13.87□□□□□ -0.19
PTCH1-227ENST00000553256 CXCL2P19875 107 aa13.87□□□□□ -0.19
PTCH1-227ENST00000553256 FXYD7P58549 80 aa13.87□□□□□ -0.19
PTCH1-227ENST00000553256 BAXQ07812 192 aa13.87□□□□□ -0.19
PTCH1-227ENST00000553256 RAB31Q13636 194 aa13.87□□□□□ -0.19
PTCH1-227ENST00000553256 C10orf113Q5VZT2 155 aa13.87□□□□□ -0.19
PTCH1-227ENST00000553256 S100A7AQ86SG5 101 aa13.87□□□□□ -0.19
PTCH1-227ENST00000553256 C11orf45Q8TAV5 145 aa13.87□□□□□ -0.19
PTCH1-227ENST00000553256 PHLDA1Q8WV24 401 aaPredicted RBP13.87□□□□□ -0.19
PTCH1-227ENST00000553256 NPCDR1Q9BY65 106 aa13.87□□□□□ -0.19
PTCH1-227ENST00000553256 ALG5Q9Y673 324 aa13.87□□□□□ -0.19
PTCH1-227ENST00000553256 SLC17A3O00476 420 aa13.86□□□□□ -0.19
PTCH1-227ENST00000553256 COX7A2P2O60397 106 aa13.86□□□□□ -0.19
PTCH1-227ENST00000553256 MPDU1O75352 247 aa13.86□□□□□ -0.19
PTCH1-227ENST00000553256 CNN1P51911 297 aaKnown RBP13.86□□□□□ -0.19
PTCH1-227ENST00000553256 B2MP61769 119 aa13.86□□□□□ -0.19
PTCH1-227ENST00000553256 EBLN2Q6P2I7 272 aa13.86□□□□□ -0.19
PTCH1-227ENST00000553256 OR11H7Q8NGC8 314 aa13.86□□□□□ -0.19
PTCH1-227ENST00000553256 OR4B1Q8NGF8 309 aa13.86□□□□□ -0.19
PTCH1-227ENST00000553256 SLC25A31Q9H0C2 315 aa13.86□□□□□ -0.19
PTCH1-227ENST00000553256 RNF24Q9Y225 148 aa13.86□□□□□ -0.19
PTCH1-227ENST00000553256 PXMP4Q9Y6I8 212 aa13.86□□□□□ -0.19
PTCH1-227ENST00000553256 SSNA1O43805 119 aa13.85□□□□□ -0.19
PTCH1-227ENST00000553256 RLN2P04090 185 aa13.85□□□□□ -0.19
PTCH1-227ENST00000553256 FGF7P21781 194 aa13.85□□□□□ -0.19
PTCH1-227ENST00000553256 PSG3Q16557 428 aa13.85□□□□□ -0.19
PTCH1-227ENST00000553256 GCSAMLQ5JQS6 135 aa13.85□□□□□ -0.19
PTCH1-227ENST00000553256 Q6ZRG5 221 aa13.85□□□□□ -0.19
PTCH1-227ENST00000553256 BPIFA4PQ86YQ2 179 aa13.85□□□□□ -0.19
PTCH1-227ENST00000553256 CELA1Q9UNI1 258 aa13.85□□□□□ -0.19
PTCH1-227ENST00000553256 SNRPCP09234 159 aaKnown RBP13.84□□□□□ -0.19
PTCH1-227ENST00000553256 FGL1Q08830 312 aa13.84□□□□□ -0.19
PTCH1-227ENST00000553256 LCN15Q6UWW0 184 aa13.84□□□□□ -0.19
PTCH1-227ENST00000553256 OR8A1Q8NGG7 326 aa13.84□□□□□ -0.19
PTCH1-227ENST00000553256 OR1L4Q8NGR5 311 aa13.84□□□□□ -0.19
PTCH1-227ENST00000553256 THAP6Q8TBB0 222 aa13.84□□□□□ -0.19
PTCH1-227ENST00000553256 WDR61Q9GZS3 305 aaKnown RBP13.84□□□□□ -0.19
PTCH1-227ENST00000553256 MFFQ9GZY8 342 aa13.84□□□□□ -0.19
PTCH1-227ENST00000553256 DNAH10Q8IVF4 4471 aa13.84□□□□□ -0.19
PTCH1-227ENST00000553256 LINC00476Q8WZB0 136 aa13.83□□□□□ -0.2
PTCH1-227ENST00000553256 FAM167A-AS1Q96KT0 104 aa13.83□□□□□ -0.2
PTCH1-227ENST00000553256 PFDN5Q99471 154 aa13.83□□□□□ -0.2
PTCH1-227ENST00000553256 ZNF586Q9NXT0 402 aa13.83□□□□□ -0.2
PTCH1-227ENST00000553256 TMEM14CQ9P0S9 112 aa13.83□□□□□ -0.2
PTCH1-227ENST00000553256 SMIM9A6NGZ8 99 aa13.82□□□□□ -0.2
PTCH1-227ENST00000553256 DUSP14O95147 198 aaKnown RBP13.82□□□□□ -0.2
PTCH1-227ENST00000553256 CLINT1Q14677 625 aa13.82□□□□□ -0.2
PTCH1-227ENST00000553256 IGF2BP2-AS1Q96M15 143 aa13.82□□□□□ -0.2
PTCH1-227ENST00000553256 SLC50A1Q9BRV3 221 aa13.82□□□□□ -0.2
PTCH1-227ENST00000553256 MBD2Q9UBB5 411 aa13.82□□□□□ -0.2
PTCH1-227ENST00000553256 HSPB11Q9Y547 144 aa13.82□□□□□ -0.2
PTCH1-227ENST00000553256 BIRC6Q9NR09 4857 aa13.81□□□□□ -0.2
PTCH1-227ENST00000553256 PRAC2D3DTV9 90 aa13.81□□□□□ -0.2
PTCH1-227ENST00000553256 H3BTX0 84 aa13.81□□□□□ -0.2
PTCH1-227ENST00000553256 NDUFB4O95168 129 aa13.81□□□□□ -0.2
PTCH1-227ENST00000553256 PRB4P10163 310 aaPredicted RBP13.81□□□□□ -0.2
PTCH1-227ENST00000553256 C12orf74Q32Q52 190 aa13.81□□□□□ -0.2
PTCH1-227ENST00000553256 ZNF738Q8NE65 137 aa13.81□□□□□ -0.2
PTCH1-227ENST00000553256 WFDC1Q9HC57 220 aa13.81□□□□□ -0.2
PTCH1-227ENST00000553256 ZNF253O75346 499 aa13.8□□□□□ -0.2
PTCH1-227ENST00000553256 JTBO76095 146 aa13.8□□□□□ -0.2
PTCH1-227ENST00000553256 FCN2Q15485 313 aa13.8□□□□□ -0.2
PTCH1-227ENST00000553256 Q6ZTC4 211 aa13.8□□□□□ -0.2
PTCH1-227ENST00000553256 RPUSD4Q96CM3 377 aaKnown RBP13.8□□□□□ -0.2
PTCH1-227ENST00000553256 ATP5SQ99766 215 aa13.8□□□□□ -0.2
PTCH1-227ENST00000553256 TRBV19A0A075B6N1 114 aa13.79□□□□□ -0.2
PTCH1-227ENST00000553256 M0R2Z0 102 aa13.79□□□□□ -0.2
PTCH1-227ENST00000553256 RPL12P30050 165 aaKnown RBP13.79□□□□□ -0.2
PTCH1-227ENST00000553256 GUK1Q16774 197 aa13.79□□□□□ -0.2
PTCH1-227ENST00000553256 SPINK13Q1W4C9 94 aa13.79□□□□□ -0.2
PTCH1-227ENST00000553256 SLC25A2Q9BXI2 301 aa13.79□□□□□ -0.2
PTCH1-227ENST00000553256 KLK5Q9Y337 293 aaPredicted RBP13.79□□□□□ -0.2
PTCH1-227ENST00000553256 AMBPP02760 352 aa13.78□□□□□ -0.2
PTCH1-227ENST00000553256 PET100P0DJ07 73 aa13.78□□□□□ -0.2
PTCH1-227ENST00000553256 PARD6GQ9BYG4 376 aaPredicted RBP13.78□□□□□ -0.2
PTCH1-227ENST00000553256 BOLA2-SMG1P6H3BVE0 249 aa13.77□□□□□ -0.21
PTCH1-227ENST00000553256 PYYP10082 97 aa13.77□□□□□ -0.21
PTCH1-227ENST00000553256 HIST1H1EP10412 219 aaKnown RBP13.77□□□□□ -0.21
PTCH1-227ENST00000553256 HIST1H1AQ02539 215 aaPredicted RBP13.77□□□□□ -0.21
PTCH1-227ENST00000553256 Q5BKY6 102 aa13.77□□□□□ -0.21
PTCH1-227ENST00000553256 MIR17HGQ75NE6 70 aa13.77□□□□□ -0.21
PTCH1-227ENST00000553256 ZNF503Q96F45 646 aa13.77□□□□□ -0.21
PTCH1-227ENST00000553256 RFNGQ9Y644 331 aa13.77□□□□□ -0.21
PTCH1-227ENST00000553256 FRAS1Q86XX4 4008 aa13.76□□□□□ -0.21
PTCH1-227ENST00000553256 PLAC8L1A1L4L8 177 aa13.76□□□□□ -0.21
PTCH1-227ENST00000553256 C11orf94C9JXX5 98 aa13.76□□□□□ -0.21
PTCH1-227ENST00000553256 PRM2P04554 102 aa13.76□□□□□ -0.21
PTCH1-227ENST00000553256 BAP18Q8IXM2 172 aa13.76□□□□□ -0.21
PTCH1-227ENST00000553256 LRRC20Q8TCA0 184 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms