RNA–Protein interactions for RNA: ENST00000553237.5

CDK4-215, Transcript of cyclin dependent kinase 4, humanhuman

TSL 2

Gene CDK4, Length 952 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-215ENST00000553237 IGHV4-4A0A075B6R2 117 aa11.4□□□□□ -0.58
CDK4-215ENST00000553237 DEFB131BA0A096LNP1 70 aa11.4□□□□□ -0.58
CDK4-215ENST00000553237 TRAV8-2A0A0B4J237 113 aa11.4□□□□□ -0.58
CDK4-215ENST00000553237 E5RGE8 158 aa11.4□□□□□ -0.58
CDK4-215ENST00000553237 CAMLGP49069 296 aa11.4□□□□□ -0.58
CDK4-215ENST00000553237 HBG1P69891 147 aa11.4□□□□□ -0.58
CDK4-215ENST00000553237 HBG2P69892 147 aa11.4□□□□□ -0.58
CDK4-215ENST00000553237 RAB31Q13636 194 aa11.4□□□□□ -0.58
CDK4-215ENST00000553237 C1orf158Q8N1D5 194 aa11.4□□□□□ -0.58
CDK4-215ENST00000553237 RNF182Q8N6D2 247 aa11.4□□□□□ -0.58
CDK4-215ENST00000553237 WDR83OSQ9Y284 106 aa11.4□□□□□ -0.58
CDK4-215ENST00000553237 GOLT1BQ9Y3E0 138 aa11.4□□□□□ -0.58
CDK4-215ENST00000553237 SMIM9A6NGZ8 99 aa11.39□□□□□ -0.59
CDK4-215ENST00000553237 RPL7P18124 248 aaKnown RBP11.39□□□□□ -0.59
CDK4-215ENST00000553237 NHLH2Q02577 135 aa11.39□□□□□ -0.59
CDK4-215ENST00000553237 VWC2Q2TAL6 325 aa11.39□□□□□ -0.59
CDK4-215ENST00000553237 PATE2Q6UY27 113 aa11.39□□□□□ -0.59
CDK4-215ENST00000553237 SLC25A31Q9H0C2 315 aa11.39□□□□□ -0.59
CDK4-215ENST00000553237 ARV1Q9H2C2 271 aa11.39□□□□□ -0.59
CDK4-215ENST00000553237 RFNGQ9Y644 331 aa11.39□□□□□ -0.59
CDK4-215ENST00000553237 UBE2L5PA0A1B0GUS4 154 aa11.38□□□□□ -0.59
CDK4-215ENST00000553237 SPART-AS1P0CW21 52 aa11.38□□□□□ -0.59
CDK4-215ENST00000553237 PRB4P10163 310 aaPredicted RBP11.38□□□□□ -0.59
CDK4-215ENST00000553237 CNN1P51911 297 aaKnown RBP11.38□□□□□ -0.59
CDK4-215ENST00000553237 ATP6V1FQ16864 119 aa11.38□□□□□ -0.59
CDK4-215ENST00000553237 PXDC1Q5TGL8 231 aa11.38□□□□□ -0.59
CDK4-215ENST00000553237 AMTNQ6UX39 209 aa11.38□□□□□ -0.59
CDK4-215ENST00000553237 RNF126Q9BV68 326 aa11.38□□□□□ -0.59
CDK4-215ENST00000553237 PLA2G2EQ9NZK7 142 aa11.38□□□□□ -0.59
CDK4-215ENST00000553237 TMEM189A5PLL7 270 aa11.37□□□□□ -0.59
CDK4-215ENST00000553237 MPC2O95563 127 aa11.37□□□□□ -0.59
CDK4-215ENST00000553237 SNRPCP09234 159 aaKnown RBP11.37□□□□□ -0.59
CDK4-215ENST00000553237 BAXQ07812 192 aa11.37□□□□□ -0.59
CDK4-215ENST00000553237 MIC13Q5XKP0 118 aa11.37□□□□□ -0.59
CDK4-215ENST00000553237 S100A7AQ86SG5 101 aa11.37□□□□□ -0.59
CDK4-215ENST00000553237 ZNF738Q8NE65 137 aa11.37□□□□□ -0.59
CDK4-215ENST00000553237 OR5C1Q8NGR4 320 aa11.37□□□□□ -0.59
CDK4-215ENST00000553237 LOC102723971A0A1B0GUV8 181 aa11.36□□□□□ -0.59
CDK4-215ENST00000553237 A8MTW9 85 aa11.36□□□□□ -0.59
CDK4-215ENST00000553237 M0R2Z0 102 aa11.36□□□□□ -0.59
CDK4-215ENST00000553237 COX7A2P2O60397 106 aa11.36□□□□□ -0.59
CDK4-215ENST00000553237 DUSP14O95147 198 aaKnown RBP11.36□□□□□ -0.59
CDK4-215ENST00000553237 HBE1P02100 147 aa11.36□□□□□ -0.59
CDK4-215ENST00000553237 PET100P0DJ07 73 aa11.36□□□□□ -0.59
CDK4-215ENST00000553237 CXCL3P19876 107 aa11.36□□□□□ -0.59
CDK4-215ENST00000553237 FGF7P21781 194 aa11.36□□□□□ -0.59
CDK4-215ENST00000553237 SPINK13Q1W4C9 94 aa11.36□□□□□ -0.59
CDK4-215ENST00000553237 FAM222AQ5U5X8 452 aa11.36□□□□□ -0.59
CDK4-215ENST00000553237 Q6ZRG5 221 aa11.36□□□□□ -0.59
CDK4-215ENST00000553237 LINC00305Q7Z4B0 112 aa11.36□□□□□ -0.59
CDK4-215ENST00000553237 OR11H7Q8NGC8 314 aa11.36□□□□□ -0.59
CDK4-215ENST00000553237 LRRC20Q8TCA0 184 aa11.36□□□□□ -0.59
CDK4-215ENST00000553237 IGF2BP2-AS1Q96M15 143 aa11.36□□□□□ -0.59
CDK4-215ENST00000553237 TMEM208Q9BTX3 173 aa11.36□□□□□ -0.59
CDK4-215ENST00000553237 PRM2P04554 102 aa11.35□□□□□ -0.59
CDK4-215ENST00000553237 RPL29P47914 159 aaKnown RBP11.35□□□□□ -0.59
CDK4-215ENST00000553237 CLINT1Q14677 625 aa11.35□□□□□ -0.59
CDK4-215ENST00000553237 RRN3P1Q2M238 152 aa11.35□□□□□ -0.59
CDK4-215ENST00000553237 TMEM37Q8WXS4 190 aa11.35□□□□□ -0.59
CDK4-215ENST00000553237 MED28Q9H204 178 aa11.35□□□□□ -0.59
CDK4-215ENST00000553237 DNAJC4Q9NNZ3 241 aa11.35□□□□□ -0.59
CDK4-215ENST00000553237 DKK2Q9UBU2 259 aa11.35□□□□□ -0.59
CDK4-215ENST00000553237 A0A087X0K7 114 aa11.34□□□□□ -0.59
CDK4-215ENST00000553237 MRPS12O15235 138 aaKnown RBP11.34□□□□□ -0.59
CDK4-215ENST00000553237 B2MP61769 119 aa11.34□□□□□ -0.59
CDK4-215ENST00000553237 RHOBP62745 196 aa11.34□□□□□ -0.59
CDK4-215ENST00000553237 HIST1H1AQ02539 215 aaPredicted RBP11.34□□□□□ -0.59
CDK4-215ENST00000553237 OPCMLQ14982 345 aa11.34□□□□□ -0.59
CDK4-215ENST00000553237 FCN2Q15485 313 aa11.34□□□□□ -0.59
CDK4-215ENST00000553237 RGS21Q2M5E4 152 aa11.34□□□□□ -0.59
CDK4-215ENST00000553237 C10orf113Q5VZT2 155 aa11.34□□□□□ -0.59
CDK4-215ENST00000553237 THAP6Q8TBB0 222 aa11.34□□□□□ -0.59
CDK4-215ENST00000553237 CHAC2Q8WUX2 184 aa11.34□□□□□ -0.59
CDK4-215ENST00000553237 NIPSNAP3BQ9BS92 247 aa11.34□□□□□ -0.59
CDK4-215ENST00000553237 SLC39A9Q9NUM3 307 aa11.34□□□□□ -0.59
CDK4-215ENST00000553237 MBD2Q9UBB5 411 aa11.34□□□□□ -0.59
CDK4-215ENST00000553237 RNF24Q9Y225 148 aa11.34□□□□□ -0.59
CDK4-215ENST00000553237 YTHDF2Q9Y5A9 579 aaKnown RBP11.34□□□□□ -0.59
CDK4-215ENST00000553237 VPS13DQ5THJ4 4388 aa11.34□□□□□ -0.59
CDK4-215ENST00000553237 ZNF705GA8MUZ8 300 aaPredicted RBP11.33□□□□□ -0.6
CDK4-215ENST00000553237 H3BTX0 84 aa11.33□□□□□ -0.6
CDK4-215ENST00000553237 CRXO43186 299 aaPredicted RBP11.33□□□□□ -0.6
CDK4-215ENST00000553237 AMBPP02760 352 aa11.33□□□□□ -0.6
CDK4-215ENST00000553237 HTN3P15516 51 aa11.33□□□□□ -0.6
CDK4-215ENST00000553237 PSG3Q16557 428 aa11.33□□□□□ -0.6
CDK4-215ENST00000553237 MORN5Q5VZ52 161 aa11.33□□□□□ -0.6
CDK4-215ENST00000553237 BAP18Q8IXM2 172 aa11.33□□□□□ -0.6
CDK4-215ENST00000553237 OR8A1Q8NGG7 326 aa11.33□□□□□ -0.6
CDK4-215ENST00000553237 OR1L4Q8NGR5 311 aa11.33□□□□□ -0.6
CDK4-215ENST00000553237 NDUFAF3Q9BU61 184 aa11.33□□□□□ -0.6
CDK4-215ENST00000553237 NPCDR1Q9BY65 106 aa11.33□□□□□ -0.6
CDK4-215ENST00000553237 PXMP4Q9Y6I8 212 aa11.33□□□□□ -0.6
CDK4-215ENST00000553237 TRAV12-2A0A075B6T6 113 aa11.32□□□□□ -0.6
CDK4-215ENST00000553237 MPDU1O75352 247 aa11.32□□□□□ -0.6
CDK4-215ENST00000553237 INSP01308 110 aa11.32□□□□□ -0.6
CDK4-215ENST00000553237 RPL12P30050 165 aaKnown RBP11.32□□□□□ -0.6
CDK4-215ENST00000553237 PPP1R14DQ9NXH3 145 aa11.32□□□□□ -0.6
CDK4-215ENST00000553237 HSPB11Q9Y547 144 aa11.32□□□□□ -0.6
CDK4-215ENST00000553237 FRAS1Q86XX4 4008 aa11.31□□□□□ -0.6
CDK4-215ENST00000553237 TRAV5A0A0B4J249 113 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms