RNA–Protein interactions for RNA: ENST00000548945.6

PTCH1-218, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 243 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-218ENST00000548945 THAP6Q8TBB0 222 aa9.1□□□□□ -0.95
PTCH1-218ENST00000548945 C16orf92Q96LL3 132 aa9.1□□□□□ -0.95
PTCH1-218ENST00000548945 GPR82Q96P67 336 aa9.1□□□□□ -0.95
PTCH1-218ENST00000548945 LYRM9A8MSI8 78 aa9.09□□□□□ -0.95
PTCH1-218ENST00000548945 HMSDA8MTL9 139 aa9.09□□□□□ -0.95
PTCH1-218ENST00000548945 F6UB75 175 aa9.09□□□□□ -0.95
PTCH1-218ENST00000548945 MED6O75586 246 aa9.09□□□□□ -0.95
PTCH1-218ENST00000548945 SCGB1D2O95969 90 aa9.09□□□□□ -0.95
PTCH1-218ENST00000548945 RLN2P04090 185 aa9.09□□□□□ -0.95
PTCH1-218ENST00000548945 S100A10P60903 97 aa9.09□□□□□ -0.95
PTCH1-218ENST00000548945 B2MP61769 119 aa9.09□□□□□ -0.95
PTCH1-218ENST00000548945 OR2F1Q13607 317 aa9.09□□□□□ -0.95
PTCH1-218ENST00000548945 RAB32Q13637 225 aa9.09□□□□□ -0.95
PTCH1-218ENST00000548945 Q5BKY6 102 aa9.09□□□□□ -0.95
PTCH1-218ENST00000548945 AMTNQ6UX39 209 aa9.09□□□□□ -0.95
PTCH1-218ENST00000548945 OR11H4Q8NGC9 324 aa9.09□□□□□ -0.95
PTCH1-218ENST00000548945 CIB3Q96Q77 187 aaPredicted RBP9.09□□□□□ -0.95
PTCH1-218ENST00000548945 TMEM208Q9BTX3 173 aa9.09□□□□□ -0.95
PTCH1-218ENST00000548945 PLA2G2EQ9NZK7 142 aa9.09□□□□□ -0.95
PTCH1-218ENST00000548945 FXYD6-FXYD2A0A087WZ82 144 aa9.08□□□□□ -0.96
PTCH1-218ENST00000548945 ZNF98A6NK75 572 aa9.08□□□□□ -0.96
PTCH1-218ENST00000548945 DUSP14O95147 198 aaKnown RBP9.08□□□□□ -0.96
PTCH1-218ENST00000548945 MBPP02686 304 aaPredicted RBP9.08□□□□□ -0.96
PTCH1-218ENST00000548945 TSPOP30536 169 aa9.08□□□□□ -0.96
PTCH1-218ENST00000548945 NKX2-5P52952 324 aaPredicted RBP9.08□□□□□ -0.96
PTCH1-218ENST00000548945 RPP30P78346 268 aaKnown RBP9.08□□□□□ -0.96
PTCH1-218ENST00000548945 OR1B1Q8NGR6 318 aa9.08□□□□□ -0.96
PTCH1-218ENST00000548945 C20orf173Q96LM9 149 aa9.08□□□□□ -0.96
PTCH1-218ENST00000548945 RSG1Q9BU20 258 aa9.08□□□□□ -0.96
PTCH1-218ENST00000548945 SLC25A32Q9H2D1 315 aa9.08□□□□□ -0.96
PTCH1-218ENST00000548945 MBD2Q9UBB5 411 aa9.08□□□□□ -0.96
PTCH1-218ENST00000548945 LSM5Q9Y4Y9 91 aaKnown RBP9.08□□□□□ -0.96
PTCH1-218ENST00000548945 PRSS46E5RG02 174 aa9.07□□□□□ -0.96
PTCH1-218ENST00000548945 K7EPK0 472 aa9.07□□□□□ -0.96
PTCH1-218ENST00000548945 WRBO00258 174 aa9.07□□□□□ -0.96
PTCH1-218ENST00000548945 INSP01308 110 aa9.07□□□□□ -0.96
PTCH1-218ENST00000548945 PVALBP20472 110 aaPredicted RBP9.07□□□□□ -0.96
PTCH1-218ENST00000548945 ID3Q02535 119 aa9.07□□□□□ -0.96
PTCH1-218ENST00000548945 ZNF546Q86UE3 836 aa9.07□□□□□ -0.96
PTCH1-218ENST00000548945 BPIFCQ8NFQ6 507 aa9.07□□□□□ -0.96
PTCH1-218ENST00000548945 C17orf77Q96MU5 243 aa9.07□□□□□ -0.96
PTCH1-218ENST00000548945 SLC25A22Q9H936 323 aa9.07□□□□□ -0.96
PTCH1-218ENST00000548945 HSPG2P98160 4391 aa9.06□□□□□ -0.96
PTCH1-218ENST00000548945 E5RGE8 158 aa9.06□□□□□ -0.96
PTCH1-218ENST00000548945 H0YIZ8 118 aa9.06□□□□□ -0.96
PTCH1-218ENST00000548945 ARPC5O15511 151 aa9.06□□□□□ -0.96
PTCH1-218ENST00000548945 IAPPP10997 89 aa9.06□□□□□ -0.96
PTCH1-218ENST00000548945 CNN1P51911 297 aaKnown RBP9.06□□□□□ -0.96
PTCH1-218ENST00000548945 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.06□□□□□ -0.96
PTCH1-218ENST00000548945 ZNF575Q86XF7 245 aa9.06□□□□□ -0.96
PTCH1-218ENST00000548945 C9orf62Q8N4C0 152 aa9.06□□□□□ -0.96
PTCH1-218ENST00000548945 INO80EQ8NBZ0 244 aaPredicted RBP9.06□□□□□ -0.96
PTCH1-218ENST00000548945 TNFSF18Q9UNG2 199 aa9.06□□□□□ -0.96
PTCH1-218ENST00000548945 RCL1Q9Y2P8 373 aaKnown RBP9.06□□□□□ -0.96
PTCH1-218ENST00000548945 L7N2F9 121 aa9.05□□□□□ -0.96
PTCH1-218ENST00000548945 CRXO43186 299 aaPredicted RBP9.05□□□□□ -0.96
PTCH1-218ENST00000548945 SYNGR2O43760 224 aa9.05□□□□□ -0.96
PTCH1-218ENST00000548945 POLR2GP62487 172 aaKnown RBP eCLIP9.05□□□□□ -0.96
PTCH1-218ENST00000548945 ZNF345Q14585 488 aa9.05□□□□□ -0.96
PTCH1-218ENST00000548945 ATG101Q9BSB4 218 aa9.05□□□□□ -0.96
PTCH1-218ENST00000548945 TMEM147Q9BVK8 224 aa9.05□□□□□ -0.96
PTCH1-218ENST00000548945 OR5AC2Q9NZP5 309 aa9.05□□□□□ -0.96
PTCH1-218ENST00000548945 PAIP2BQ9ULR5 123 aaKnown RBP9.05□□□□□ -0.96
PTCH1-218ENST00000548945 HSPB11Q9Y547 144 aa9.05□□□□□ -0.96
PTCH1-218ENST00000548945 A0A0D9SG52 128 aa9.04□□□□□ -0.96
PTCH1-218ENST00000548945 M0R2Z0 102 aa9.04□□□□□ -0.96
PTCH1-218ENST00000548945 SSSCA1O60232 199 aa9.04□□□□□ -0.96
PTCH1-218ENST00000548945 ORM2P19652 201 aa9.04□□□□□ -0.96
PTCH1-218ENST00000548945 VAMP2P63027 116 aa9.04□□□□□ -0.96
PTCH1-218ENST00000548945 SPINK13Q1W4C9 94 aa9.04□□□□□ -0.96
PTCH1-218ENST00000548945 ACOT7LQ6ZUV0 252 aa9.04□□□□□ -0.96
PTCH1-218ENST00000548945 TMEM256Q8N2U0 113 aa9.04□□□□□ -0.96
PTCH1-218ENST00000548945 TRAV8-2A0A0B4J237 113 aa9.03□□□□□ -0.96
PTCH1-218ENST00000548945 NBDYA0A0U1RRE5 68 aa9.03□□□□□ -0.96
PTCH1-218ENST00000548945 RNF222A6NCQ9 220 aa9.03□□□□□ -0.96
PTCH1-218ENST00000548945 ZNF705GA8MUZ8 300 aaPredicted RBP9.03□□□□□ -0.96
PTCH1-218ENST00000548945 H3BRN7 92 aa9.03□□□□□ -0.96
PTCH1-218ENST00000548945 CDK2AP2O75956 126 aa9.03□□□□□ -0.96
PTCH1-218ENST00000548945 RPL7P18124 248 aaKnown RBP9.03□□□□□ -0.96
PTCH1-218ENST00000548945 CXCL2P19875 107 aa9.03□□□□□ -0.96
PTCH1-218ENST00000548945 AKR1C1Q04828 323 aa9.03□□□□□ -0.96
PTCH1-218ENST00000548945 LGALSLQ3ZCW2 172 aaPredicted RBP9.03□□□□□ -0.96
PTCH1-218ENST00000548945 TMEM144Q7Z5S9 345 aa9.03□□□□□ -0.96
PTCH1-218ENST00000548945 ZNRF2Q8NHG8 242 aa9.03□□□□□ -0.96
PTCH1-218ENST00000548945 AQP10Q96PS8 301 aa9.03□□□□□ -0.96
PTCH1-218ENST00000548945 C11orf1Q9H5F2 150 aa9.03□□□□□ -0.96
PTCH1-218ENST00000548945 STRAPQ9Y3F4 350 aaKnown RBP9.03□□□□□ -0.96
PTCH1-218ENST00000548945 PLAC8L1A1L4L8 177 aa9.02□□□□□ -0.97
PTCH1-218ENST00000548945 CBY3A6NI87 242 aa9.02□□□□□ -0.97
PTCH1-218ENST00000548945 ATP5G1P05496 136 aa9.02□□□□□ -0.97
PTCH1-218ENST00000548945 DEFB130BP0DP73 79 aa9.02□□□□□ -0.97
PTCH1-218ENST00000548945 DEFB130AP0DP74 79 aa9.02□□□□□ -0.97
PTCH1-218ENST00000548945 GATA2P23769 480 aaPredicted RBP9.02□□□□□ -0.97
PTCH1-218ENST00000548945 RPL12P30050 165 aaKnown RBP9.02□□□□□ -0.97
PTCH1-218ENST00000548945 ATP5G3P48201 142 aa9.02□□□□□ -0.97
PTCH1-218ENST00000548945 TAS2R30P59541 319 aa9.02□□□□□ -0.97
PTCH1-218ENST00000548945 PLP1P60201 277 aa9.02□□□□□ -0.97
PTCH1-218ENST00000548945 SPANXN5Q5MJ07 72 aa9.02□□□□□ -0.97
PTCH1-218ENST00000548945 TMEM182Q6ZP80 229 aaPredicted RBP9.02□□□□□ -0.97
PTCH1-218ENST00000548945 S100A7AQ86SG5 101 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms