RNA–Protein interactions for RNA: ENST00000539661.5

RAB40C-205, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 3 BASIC

Gene RAB40C, Length 2,609 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-205ENST00000539661 PSG8Q9UQ74 426 aa13.96□□□□□ -0.17
RAB40C-205ENST00000539661 TRBV19A0A075B6N1 114 aa13.96□□□□□ -0.17
RAB40C-205ENST00000539661 HBDP02042 147 aa13.96□□□□□ -0.17
RAB40C-205ENST00000539661 PSG3Q16557 428 aa13.96□□□□□ -0.17
RAB40C-205ENST00000539661 ZNF474Q6S9Z5 364 aaPredicted RBP13.96□□□□□ -0.17
RAB40C-205ENST00000539661 SEM1Q6ZVN7 128 aa13.96□□□□□ -0.17
RAB40C-205ENST00000539661 SCNM1Q9BWG6 230 aa13.96□□□□□ -0.17
RAB40C-205ENST00000539661 F11RQ9Y624 299 aaKnown RBP13.96□□□□□ -0.17
RAB40C-205ENST00000539661 COL12A1Q99715 3063 aa13.96□□□□□ -0.17
RAB40C-205ENST00000539661 FAM106CPP0CH98 169 aa13.95□□□□□ -0.18
RAB40C-205ENST00000539661 CACNG7P62955 275 aa13.95□□□□□ -0.18
RAB40C-205ENST00000539661 FAM106AQ4KMX7 169 aa13.95□□□□□ -0.18
RAB40C-205ENST00000539661 ORMDL3Q8N138 153 aa13.95□□□□□ -0.18
RAB40C-205ENST00000539661 PIFOQ8TCI5 191 aa13.95□□□□□ -0.18
RAB40C-205ENST00000539661 PRELID3AQ96N28 172 aa13.95□□□□□ -0.18
RAB40C-205ENST00000539661 D6R8Y8 96 aa13.95□□□□□ -0.18
RAB40C-205ENST00000539661 CCL11P51671 97 aa13.95□□□□□ -0.18
RAB40C-205ENST00000539661 RBPJQ06330 500 aa13.95□□□□□ -0.18
RAB40C-205ENST00000539661 FAM104BQ5XKR9 115 aa13.95□□□□□ -0.18
RAB40C-205ENST00000539661 ZNF414Q96IQ9 312 aa13.95□□□□□ -0.18
RAB40C-205ENST00000539661 NGBQ9NPG2 151 aa13.95□□□□□ -0.18
RAB40C-205ENST00000539661 SPCS1Q9Y6A9 102 aa13.95□□□□□ -0.18
RAB40C-205ENST00000539661 KLK10O43240 276 aa13.94□□□□□ -0.18
RAB40C-205ENST00000539661 LOXL1Q08397 574 aaPredicted RBP13.94□□□□□ -0.18
RAB40C-205ENST00000539661 FDCSPQ8NFU4 85 aa13.94□□□□□ -0.18
RAB40C-205ENST00000539661 ABHD17AQ96GS6 310 aa13.94□□□□□ -0.18
RAB40C-205ENST00000539661 RITA1Q96K30 269 aa13.94□□□□□ -0.18
RAB40C-205ENST00000539661 HILPDAQ9Y5L2 63 aa13.94□□□□□ -0.18
RAB40C-205ENST00000539661 CRYGBP07316 175 aa13.94□□□□□ -0.18
RAB40C-205ENST00000539661 PAX8Q06710 450 aa13.94□□□□□ -0.18
RAB40C-205ENST00000539661 Q71RC1 249 aaPredicted RBP13.94□□□□□ -0.18
RAB40C-205ENST00000539661 THBDP07204 575 aa13.94□□□□□ -0.18
RAB40C-205ENST00000539661 FABP2P12104 132 aa13.94□□□□□ -0.18
RAB40C-205ENST00000539661 CRIP1P50238 77 aa13.94□□□□□ -0.18
RAB40C-205ENST00000539661 NBASA2RRP1 2371 aa13.93□□□□□ -0.18
RAB40C-205ENST00000539661 IGHV3-21A0A0B4J1V1 117 aa13.93□□□□□ -0.18
RAB40C-205ENST00000539661 K7EM74 188 aa13.93□□□□□ -0.18
RAB40C-205ENST00000539661 SIGLEC15Q6ZMC9 328 aa13.93□□□□□ -0.18
RAB40C-205ENST00000539661 IFI27L1Q96BM0 104 aa13.93□□□□□ -0.18
RAB40C-205ENST00000539661 RASL11BQ9BPW5 248 aa13.93□□□□□ -0.18
RAB40C-205ENST00000539661 SHANK2-AS3Q9BTD1 123 aa13.93□□□□□ -0.18
RAB40C-205ENST00000539661 INSIG2Q9Y5U4 225 aa13.93□□□□□ -0.18
RAB40C-205ENST00000539661 ENSAO43768 121 aaKnown RBP13.93□□□□□ -0.18
RAB40C-205ENST00000539661 CSMD1Q96PZ7 3565 aa13.92□□□□□ -0.18
RAB40C-205ENST00000539661 LOC389332A0A1B0GUA5 103 aa13.92□□□□□ -0.18
RAB40C-205ENST00000539661 FCN3O75636 299 aa13.92□□□□□ -0.18
RAB40C-205ENST00000539661 NUP37Q8NFH4 326 aa13.92□□□□□ -0.18
RAB40C-205ENST00000539661 SERTM2A0A1B0GWG4 89 aa13.92□□□□□ -0.18
RAB40C-205ENST00000539661 TPPP3Q9BW30 176 aa13.92□□□□□ -0.18
RAB40C-205ENST00000539661 HIGD1BQ9P298 99 aa13.92□□□□□ -0.18
RAB40C-205ENST00000539661 SHISA9B4DS77 424 aa13.91□□□□□ -0.18
RAB40C-205ENST00000539661 H3BRN7 92 aa13.91□□□□□ -0.18
RAB40C-205ENST00000539661 NDUFB3O43676 98 aa13.91□□□□□ -0.18
RAB40C-205ENST00000539661 SMIM13P0DJ93 91 aa13.91□□□□□ -0.18
RAB40C-205ENST00000539661 TMEM11P17152 192 aa13.91□□□□□ -0.18
RAB40C-205ENST00000539661 SIGLEC9Q9Y336 463 aa13.91□□□□□ -0.18
RAB40C-205ENST00000539661 DLX6P56179 175 aa13.91□□□□□ -0.18
RAB40C-205ENST00000539661 LYZL1Q6UWQ5 148 aa13.91□□□□□ -0.18
RAB40C-205ENST00000539661 RAB37Q96AX2 223 aa13.91□□□□□ -0.18
RAB40C-205ENST00000539661 TACC2O95359 2948 aa13.9□□□□□ -0.18
RAB40C-205ENST00000539661 PPIAL4EA0A075B759 164 aa13.9□□□□□ -0.18
RAB40C-205ENST00000539661 TEX22C9J3V5 150 aa13.9□□□□□ -0.18
RAB40C-205ENST00000539661 I3L2K1 104 aa13.9□□□□□ -0.18
RAB40C-205ENST00000539661 PPIAL4FP0DN26 164 aa13.9□□□□□ -0.18
RAB40C-205ENST00000539661 CCL8P80075 99 aa13.9□□□□□ -0.18
RAB40C-205ENST00000539661 NAA38Q9BRA0 125 aaKnown RBP13.9□□□□□ -0.18
RAB40C-205ENST00000539661 TMEM189A5PLL7 270 aa13.9□□□□□ -0.18
RAB40C-205ENST00000539661 FTH1P19P0C7X4 201 aa13.9□□□□□ -0.18
RAB40C-205ENST00000539661 CD40P25942 277 aa13.9□□□□□ -0.18
RAB40C-205ENST00000539661 MRPL51Q4U2R6 128 aaKnown RBP13.9□□□□□ -0.18
RAB40C-205ENST00000539661 SAMD5Q5TGI4 173 aa13.9□□□□□ -0.18
RAB40C-205ENST00000539661 ASCL5Q7RTU5 278 aa13.9□□□□□ -0.18
RAB40C-205ENST00000539661 AMN1Q8IY45 258 aa13.9□□□□□ -0.18
RAB40C-205ENST00000539661 TMEM133Q9H2Q1 129 aa13.9□□□□□ -0.18
RAB40C-205ENST00000539661 NMUP48645 174 aa13.89□□□□□ -0.19
RAB40C-205ENST00000539661 PCP2Q8IVA1 136 aa13.89□□□□□ -0.19
RAB40C-205ENST00000539661 POLEQ07864 2286 aa13.89□□□□□ -0.19
RAB40C-205ENST00000539661 C17orf100A8MU93 164 aa13.89□□□□□ -0.19
RAB40C-205ENST00000539661 TNFRSF13BO14836 293 aaPredicted RBP13.89□□□□□ -0.19
RAB40C-205ENST00000539661 NDUFS7O75251 213 aa13.89□□□□□ -0.19
RAB40C-205ENST00000539661 TNFRSF14Q92956 283 aa13.89□□□□□ -0.19
RAB40C-205ENST00000539661 ARFGEF3Q5TH69 2177 aa13.88□□□□□ -0.19
RAB40C-205ENST00000539661 LRBAP50851 2863 aa13.88□□□□□ -0.19
RAB40C-205ENST00000539661 TMEM213A2RRL7 107 aa13.88□□□□□ -0.19
RAB40C-205ENST00000539661 FBLL1A6NHQ2 334 aaKnown RBP13.88□□□□□ -0.19
RAB40C-205ENST00000539661 IGKV1-17P01599 117 aa13.88□□□□□ -0.19
RAB40C-205ENST00000539661 RBP4P02753 201 aa13.88□□□□□ -0.19
RAB40C-205ENST00000539661 SCGB1A1P11684 91 aa13.88□□□□□ -0.19
RAB40C-205ENST00000539661 COX8CQ7Z4L0 72 aa13.88□□□□□ -0.19
RAB40C-205ENST00000539661 TMEM178BH3BS89 294 aa13.88□□□□□ -0.19
RAB40C-205ENST00000539661 PDE6HQ13956 83 aa13.88□□□□□ -0.19
RAB40C-205ENST00000539661 TMEM155Q4W5P6 130 aa13.88□□□□□ -0.19
RAB40C-205ENST00000539661 PPP1R27Q86WC6 154 aa13.88□□□□□ -0.19
RAB40C-205ENST00000539661 C17orf77Q96MU5 243 aa13.88□□□□□ -0.19
RAB40C-205ENST00000539661 SRSF8Q9BRL6 282 aaKnown RBP13.88□□□□□ -0.19
RAB40C-205ENST00000539661 IGHV3-72A0A0B4J1Y9 119 aa13.87□□□□□ -0.19
RAB40C-205ENST00000539661 APELAP0DMC3 54 aa13.87□□□□□ -0.19
RAB40C-205ENST00000539661 IGHV1-8P0DP01 117 aa13.87□□□□□ -0.19
RAB40C-205ENST00000539661 LINC01559Q495D7 138 aa13.87□□□□□ -0.19
RAB40C-205ENST00000539661 LINC01546A6NGU7 62 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms