RNA–Protein interactions for RNA: ENST00000523555.5

PABPC1-222, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 3

Gene PABPC1, Length 522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-222ENST00000523555 ALG5Q9Y673 324 aa6.86□□□□□ -1.31
PABPC1-222ENST00000523555 IGHV3OR16-12A0A075B7B8 117 aa6.85□□□□□ -1.31
PABPC1-222ENST00000523555 E5RGE8 158 aa6.85□□□□□ -1.31
PABPC1-222ENST00000523555 H3BQ15 152 aa6.85□□□□□ -1.31
PABPC1-222ENST00000523555 CRXO43186 299 aaPredicted RBP6.85□□□□□ -1.31
PABPC1-222ENST00000523555 PRM2P04554 102 aa6.85□□□□□ -1.31
PABPC1-222ENST00000523555 MIFP14174 115 aa6.85□□□□□ -1.31
PABPC1-222ENST00000523555 CNN1P51911 297 aaKnown RBP6.85□□□□□ -1.31
PABPC1-222ENST00000523555 B2MP61769 119 aa6.85□□□□□ -1.31
PABPC1-222ENST00000523555 CLINT1Q14677 625 aa6.85□□□□□ -1.31
PABPC1-222ENST00000523555 C10orf113Q5VZT2 155 aa6.85□□□□□ -1.31
PABPC1-222ENST00000523555 EBLN2Q6P2I7 272 aa6.85□□□□□ -1.31
PABPC1-222ENST00000523555 ZNF705AQ6ZN79 300 aaPredicted RBP6.85□□□□□ -1.31
PABPC1-222ENST00000523555 C1orf158Q8N1D5 194 aa6.85□□□□□ -1.31
PABPC1-222ENST00000523555 OR11H7Q8NGC8 314 aa6.85□□□□□ -1.31
PABPC1-222ENST00000523555 CLUHP3Q96NS8 147 aa6.85□□□□□ -1.31
PABPC1-222ENST00000523555 NPCDR1Q9BY65 106 aa6.85□□□□□ -1.31
PABPC1-222ENST00000523555 MFFQ9GZY8 342 aa6.85□□□□□ -1.31
PABPC1-222ENST00000523555 SLC39A9Q9NUM3 307 aa6.85□□□□□ -1.31
PABPC1-222ENST00000523555 PXMP4Q9Y6I8 212 aa6.85□□□□□ -1.31
PABPC1-222ENST00000523555 DNAH2Q9P225 4427 aa6.84□□□□□ -1.31
PABPC1-222ENST00000523555 NUPR2A6NF83 97 aa6.84□□□□□ -1.31
PABPC1-222ENST00000523555 ZNF705FA8MVS1 300 aaPredicted RBP6.84□□□□□ -1.31
PABPC1-222ENST00000523555 PRAC2D3DTV9 90 aa6.84□□□□□ -1.31
PABPC1-222ENST00000523555 M0R2Z0 102 aa6.84□□□□□ -1.31
PABPC1-222ENST00000523555 MPC2O95563 127 aa6.84□□□□□ -1.31
PABPC1-222ENST00000523555 IGLC2P0DOY2 106 aa6.84□□□□□ -1.31
PABPC1-222ENST00000523555 RPL29P47914 159 aaKnown RBP6.84□□□□□ -1.31
PABPC1-222ENST00000523555 NUTF2P61970 127 aaKnown RBP6.84□□□□□ -1.31
PABPC1-222ENST00000523555 HBG1P69891 147 aa6.84□□□□□ -1.31
PABPC1-222ENST00000523555 HBG2P69892 147 aa6.84□□□□□ -1.31
PABPC1-222ENST00000523555 PSG9Q00887 426 aa6.84□□□□□ -1.31
PABPC1-222ENST00000523555 PSG3Q16557 428 aa6.84□□□□□ -1.31
PABPC1-222ENST00000523555 SPINK13Q1W4C9 94 aa6.84□□□□□ -1.31
PABPC1-222ENST00000523555 PXDC1Q5TGL8 231 aa6.84□□□□□ -1.31
PABPC1-222ENST00000523555 SPATA31B1PQ5VZV4 182 aa6.84□□□□□ -1.31
PABPC1-222ENST00000523555 Q6ZTC4 211 aa6.84□□□□□ -1.31
PABPC1-222ENST00000523555 ZNF738Q8NE65 137 aa6.84□□□□□ -1.31
PABPC1-222ENST00000523555 SAT2Q96F10 170 aaPredicted RBP6.84□□□□□ -1.31
PABPC1-222ENST00000523555 C1QTNF4Q9BXJ3 329 aa6.84□□□□□ -1.31
PABPC1-222ENST00000523555 PARD6GQ9BYG4 376 aaPredicted RBP6.84□□□□□ -1.31
PABPC1-222ENST00000523555 DNAJC4Q9NNZ3 241 aa6.84□□□□□ -1.31
PABPC1-222ENST00000523555 ZNF331Q9NQX6 463 aaPredicted RBP6.84□□□□□ -1.31
PABPC1-222ENST00000523555 ZNF586Q9NXT0 402 aa6.84□□□□□ -1.31
PABPC1-222ENST00000523555 MBD2Q9UBB5 411 aa6.84□□□□□ -1.31
PABPC1-222ENST00000523555 RFNGQ9Y644 331 aa6.84□□□□□ -1.31
PABPC1-222ENST00000523555 TRAV12-2A0A075B6T6 113 aa6.83□□□□□ -1.32
PABPC1-222ENST00000523555 RLN2P04090 185 aa6.83□□□□□ -1.32
PABPC1-222ENST00000523555 PYYP10082 97 aa6.83□□□□□ -1.32
PABPC1-222ENST00000523555 S100A7P31151 101 aa6.83□□□□□ -1.32
PABPC1-222ENST00000523555 KIR3DS1Q14943 382 aa6.83□□□□□ -1.32
PABPC1-222ENST00000523555 ATP6V1FQ16864 119 aa6.83□□□□□ -1.32
PABPC1-222ENST00000523555 SAMD13Q5VXD3 122 aa6.83□□□□□ -1.32
PABPC1-222ENST00000523555 Q6ZRG5 221 aa6.83□□□□□ -1.32
PABPC1-222ENST00000523555 BPIFA4PQ86YQ2 179 aa6.83□□□□□ -1.32
PABPC1-222ENST00000523555 BAP18Q8IXM2 172 aa6.83□□□□□ -1.32
PABPC1-222ENST00000523555 OR8A1Q8NGG7 326 aa6.83□□□□□ -1.32
PABPC1-222ENST00000523555 CHAC2Q8WUX2 184 aa6.83□□□□□ -1.32
PABPC1-222ENST00000523555 LINC00476Q8WZB0 136 aa6.83□□□□□ -1.32
PABPC1-222ENST00000523555 SMIM3Q9BZL3 60 aa6.83□□□□□ -1.32
PABPC1-222ENST00000523555 WDR61Q9GZS3 305 aaKnown RBP6.83□□□□□ -1.32
PABPC1-222ENST00000523555 WFDC1Q9HC57 220 aa6.83□□□□□ -1.32
PABPC1-222ENST00000523555 EIF3GO75821 320 aaKnown RBP eCLIP6.82□□□□□ -1.32
PABPC1-222ENST00000523555 JTBO76095 146 aa6.82□□□□□ -1.32
PABPC1-222ENST00000523555 PTTG1O95997 202 aa6.82□□□□□ -1.32
PABPC1-222ENST00000523555 EMP1P54849 157 aa6.82□□□□□ -1.32
PABPC1-222ENST00000523555 CYCSP99999 105 aaKnown RBP6.82□□□□□ -1.32
PABPC1-222ENST00000523555 HIST1H1AQ02539 215 aaPredicted RBP6.82□□□□□ -1.32
PABPC1-222ENST00000523555 RAB31Q13636 194 aa6.82□□□□□ -1.32
PABPC1-222ENST00000523555 FCN2Q15485 313 aa6.82□□□□□ -1.32
PABPC1-222ENST00000523555 C12orf74Q32Q52 190 aa6.82□□□□□ -1.32
PABPC1-222ENST00000523555 LCN15Q6UWW0 184 aa6.82□□□□□ -1.32
PABPC1-222ENST00000523555 MIR17HGQ75NE6 70 aa6.82□□□□□ -1.32
PABPC1-222ENST00000523555 OR1L4Q8NGR5 311 aa6.82□□□□□ -1.32
PABPC1-222ENST00000523555 LRRC20Q8TCA0 184 aa6.82□□□□□ -1.32
PABPC1-222ENST00000523555 RPUSD4Q96CM3 377 aaKnown RBP6.82□□□□□ -1.32
PABPC1-222ENST00000523555 NEU1Q99519 415 aa6.82□□□□□ -1.32
PABPC1-222ENST00000523555 SLC25A2Q9BXI2 301 aa6.82□□□□□ -1.32
PABPC1-222ENST00000523555 SLC25A31Q9H0C2 315 aa6.82□□□□□ -1.32
PABPC1-222ENST00000523555 HRH4Q9H3N8 390 aa6.82□□□□□ -1.32
PABPC1-222ENST00000523555 PLA2G2EQ9NZK7 142 aa6.82□□□□□ -1.32
PABPC1-222ENST00000523555 HSPB11Q9Y547 144 aa6.82□□□□□ -1.32
PABPC1-222ENST00000523555 NDUFB4O95168 129 aa6.81□□□□□ -1.32
PABPC1-222ENST00000523555 LY6G6CO95867 125 aa6.81□□□□□ -1.32
PABPC1-222ENST00000523555 CXCL2P19875 107 aa6.81□□□□□ -1.32
PABPC1-222ENST00000523555 Q5BKY6 102 aa6.81□□□□□ -1.32
PABPC1-222ENST00000523555 FAM167A-AS1Q96KT0 104 aa6.81□□□□□ -1.32
PABPC1-222ENST00000523555 IGF2BP2-AS1Q96M15 143 aa6.81□□□□□ -1.32
PABPC1-222ENST00000523555 PFDN5Q99471 154 aa6.81□□□□□ -1.32
PABPC1-222ENST00000523555 ATP5SQ99766 215 aa6.81□□□□□ -1.32
PABPC1-222ENST00000523555 SLC50A1Q9BRV3 221 aa6.81□□□□□ -1.32
PABPC1-222ENST00000523555 ZNF705GA8MUZ8 300 aaPredicted RBP6.8□□□□□ -1.32
PABPC1-222ENST00000523555 BOLA2-SMG1P6H3BVE0 249 aa6.8□□□□□ -1.32
PABPC1-222ENST00000523555 M0R3E3 92 aa6.8□□□□□ -1.32
PABPC1-222ENST00000523555 MPDU1O75352 247 aa6.8□□□□□ -1.32
PABPC1-222ENST00000523555 DUSP14O95147 198 aaKnown RBP6.8□□□□□ -1.32
PABPC1-222ENST00000523555 AZU1P20160 251 aa6.8□□□□□ -1.32
PABPC1-222ENST00000523555 RPL12P30050 165 aaKnown RBP6.8□□□□□ -1.32
PABPC1-222ENST00000523555 RHOBP62745 196 aa6.8□□□□□ -1.32
PABPC1-222ENST00000523555 S100A7AQ86SG5 101 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms