RNA–Protein interactions for RNA: ENST00000496342.1

RHBDD3-207, Transcript of rhomboid domain containing 3, humanhuman

TSL 2

Gene RHBDD3, Length 849 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-207ENST00000496342 FCN2Q15485 313 aa12.71□□□□□ -0.37
RHBDD3-207ENST00000496342 TMEM41BQ5BJD5 291 aa12.71□□□□□ -0.37
RHBDD3-207ENST00000496342 Q6ZRG5 221 aa12.71□□□□□ -0.37
RHBDD3-207ENST00000496342 DNAJC4Q9NNZ3 241 aa12.71□□□□□ -0.37
RHBDD3-207ENST00000496342 RYR3Q15413 4870 aa12.7□□□□□ -0.38
RHBDD3-207ENST00000496342 IGHV3OR16-12A0A075B7B8 117 aa12.7□□□□□ -0.38
RHBDD3-207ENST00000496342 ELOA3CA0A087WX78 387 aaPredicted RBP12.7□□□□□ -0.38
RHBDD3-207ENST00000496342 LCE6AA0A183 80 aa12.7□□□□□ -0.38
RHBDD3-207ENST00000496342 H3BQ15 152 aa12.7□□□□□ -0.38
RHBDD3-207ENST00000496342 NUTF2P61970 127 aaKnown RBP12.7□□□□□ -0.38
RHBDD3-207ENST00000496342 SAMD13Q5VXD3 122 aa12.7□□□□□ -0.38
RHBDD3-207ENST00000496342 SPATA31B1PQ5VZV4 182 aa12.7□□□□□ -0.38
RHBDD3-207ENST00000496342 OR11H7Q8NGC8 314 aa12.7□□□□□ -0.38
RHBDD3-207ENST00000496342 MFFQ9GZY8 342 aa12.7□□□□□ -0.38
RHBDD3-207ENST00000496342 HSPB11Q9Y547 144 aa12.7□□□□□ -0.38
RHBDD3-207ENST00000496342 CNN1P51911 297 aaKnown RBP12.69□□□□□ -0.38
RHBDD3-207ENST00000496342 PSG9Q00887 426 aa12.69□□□□□ -0.38
RHBDD3-207ENST00000496342 AMTNQ6UX39 209 aa12.69□□□□□ -0.38
RHBDD3-207ENST00000496342 BPIFA4PQ86YQ2 179 aa12.69□□□□□ -0.38
RHBDD3-207ENST00000496342 OR1L4Q8NGR5 311 aa12.69□□□□□ -0.38
RHBDD3-207ENST00000496342 LRRC20Q8TCA0 184 aa12.69□□□□□ -0.38
RHBDD3-207ENST00000496342 WDR61Q9GZS3 305 aaKnown RBP12.69□□□□□ -0.38
RHBDD3-207ENST00000496342 A8MTW9 85 aa12.68□□□□□ -0.38
RHBDD3-207ENST00000496342 ZNF705FA8MVS1 300 aaPredicted RBP12.68□□□□□ -0.38
RHBDD3-207ENST00000496342 IGLC2P0DOY2 106 aa12.68□□□□□ -0.38
RHBDD3-207ENST00000496342 MIFP14174 115 aa12.68□□□□□ -0.38
RHBDD3-207ENST00000496342 PSG3Q16557 428 aa12.68□□□□□ -0.38
RHBDD3-207ENST00000496342 S100A7AQ86SG5 101 aa12.68□□□□□ -0.38
RHBDD3-207ENST00000496342 C11orf45Q8TAV5 145 aa12.68□□□□□ -0.38
RHBDD3-207ENST00000496342 CHAC2Q8WUX2 184 aa12.68□□□□□ -0.38
RHBDD3-207ENST00000496342 PFDN5Q99471 154 aa12.68□□□□□ -0.38
RHBDD3-207ENST00000496342 LYSTQ99698 3801 aa12.68□□□□□ -0.38
RHBDD3-207ENST00000496342 C1QTNF4Q9BXJ3 329 aa12.68□□□□□ -0.38
RHBDD3-207ENST00000496342 ZNF331Q9NQX6 463 aaPredicted RBP12.68□□□□□ -0.38
RHBDD3-207ENST00000496342 CELA1Q9UNI1 258 aa12.68□□□□□ -0.38
RHBDD3-207ENST00000496342 RFNGQ9Y644 331 aa12.68□□□□□ -0.38
RHBDD3-207ENST00000496342 M0R2Z0 102 aa12.67□□□□□ -0.38
RHBDD3-207ENST00000496342 PET100P0DJ07 73 aa12.67□□□□□ -0.38
RHBDD3-207ENST00000496342 RPL12P30050 165 aaKnown RBP12.67□□□□□ -0.38
RHBDD3-207ENST00000496342 HIST1H1AQ02539 215 aaPredicted RBP12.67□□□□□ -0.38
RHBDD3-207ENST00000496342 SPINK13Q1W4C9 94 aa12.67□□□□□ -0.38
RHBDD3-207ENST00000496342 LCN15Q6UWW0 184 aa12.67□□□□□ -0.38
RHBDD3-207ENST00000496342 PHLDA1Q8WV24 401 aaPredicted RBP12.67□□□□□ -0.38
RHBDD3-207ENST00000496342 CLUHP3Q96NS8 147 aa12.67□□□□□ -0.38
RHBDD3-207ENST00000496342 ATP5SQ99766 215 aa12.67□□□□□ -0.38
RHBDD3-207ENST00000496342 MED28Q9H204 178 aa12.67□□□□□ -0.38
RHBDD3-207ENST00000496342 WFDC1Q9HC57 220 aa12.67□□□□□ -0.38
RHBDD3-207ENST00000496342 PRAC2D3DTV9 90 aa12.66□□□□□ -0.38
RHBDD3-207ENST00000496342 MPDU1O75352 247 aa12.66□□□□□ -0.38
RHBDD3-207ENST00000496342 PYYP10082 97 aa12.66□□□□□ -0.38
RHBDD3-207ENST00000496342 CEMP1Q6PRD7 247 aaPredicted RBP12.66□□□□□ -0.38
RHBDD3-207ENST00000496342 ZNF705AQ6ZN79 300 aaPredicted RBP12.66□□□□□ -0.38
RHBDD3-207ENST00000496342 ZNF767PQ75MW2 155 aa12.66□□□□□ -0.38
RHBDD3-207ENST00000496342 MIR17HGQ75NE6 70 aa12.66□□□□□ -0.38
RHBDD3-207ENST00000496342 C1orf158Q8N1D5 194 aa12.66□□□□□ -0.38
RHBDD3-207ENST00000496342 RPUSD4Q96CM3 377 aaKnown RBP12.66□□□□□ -0.38
RHBDD3-207ENST00000496342 ZNF586Q9NXT0 402 aa12.66□□□□□ -0.38
RHBDD3-207ENST00000496342 SACSQ9NZJ4 4579 aa12.66□□□□□ -0.38
RHBDD3-207ENST00000496342 NUPR2A6NF83 97 aa12.65□□□□□ -0.38
RHBDD3-207ENST00000496342 CXCL2P19875 107 aa12.65□□□□□ -0.38
RHBDD3-207ENST00000496342 Q5BKY6 102 aa12.65□□□□□ -0.38
RHBDD3-207ENST00000496342 BAP18Q8IXM2 172 aa12.65□□□□□ -0.38
RHBDD3-207ENST00000496342 OR8A1Q8NGG7 326 aa12.65□□□□□ -0.38
RHBDD3-207ENST00000496342 SLC50A1Q9BRV3 221 aa12.65□□□□□ -0.38
RHBDD3-207ENST00000496342 SLC25A2Q9BXI2 301 aa12.65□□□□□ -0.38
RHBDD3-207ENST00000496342 PARD6GQ9BYG4 376 aaPredicted RBP12.65□□□□□ -0.38
RHBDD3-207ENST00000496342 TRAV12-2A0A075B6T6 113 aa12.64□□□□□ -0.39
RHBDD3-207ENST00000496342 EIF3GO75821 320 aaKnown RBP eCLIP12.64□□□□□ -0.39
RHBDD3-207ENST00000496342 DUSP14O95147 198 aaKnown RBP12.64□□□□□ -0.39
RHBDD3-207ENST00000496342 PRM2P04554 102 aa12.64□□□□□ -0.39
RHBDD3-207ENST00000496342 SAT2Q96F10 170 aaPredicted RBP12.64□□□□□ -0.39
RHBDD3-207ENST00000496342 HRH4Q9H3N8 390 aa12.64□□□□□ -0.39
RHBDD3-207ENST00000496342 RNF24Q9Y225 148 aa12.64□□□□□ -0.39
RHBDD3-207ENST00000496342 RYR2Q92736 4967 aa12.64□□□□□ -0.39
RHBDD3-207ENST00000496342 ALMS1Q8TCU4 4167 aa12.64□□□□□ -0.39
RHBDD3-207ENST00000496342 CRXO43186 299 aaPredicted RBP12.63□□□□□ -0.39
RHBDD3-207ENST00000496342 EMP1P54849 157 aa12.63□□□□□ -0.39
RHBDD3-207ENST00000496342 RHOBP62745 196 aa12.63□□□□□ -0.39
RHBDD3-207ENST00000496342 FAM167A-AS1Q96KT0 104 aa12.63□□□□□ -0.39
RHBDD3-207ENST00000496342 BOLA2-SMG1P6H3BVE0 249 aa12.62□□□□□ -0.39
RHBDD3-207ENST00000496342 RGS21Q2M5E4 152 aa12.62□□□□□ -0.39
RHBDD3-207ENST00000496342 Q6ZTC4 211 aa12.62□□□□□ -0.39
RHBDD3-207ENST00000496342 BLNKQ8WV28 456 aa12.62□□□□□ -0.39
RHBDD3-207ENST00000496342 PLECQ15149 4684 aaKnown RBP12.62□□□□□ -0.39
RHBDD3-207ENST00000496342 M0R3E3 92 aa12.61□□□□□ -0.39
RHBDD3-207ENST00000496342 JTBO76095 146 aa12.61□□□□□ -0.39
RHBDD3-207ENST00000496342 NDUFB4O95168 129 aa12.61□□□□□ -0.39
RHBDD3-207ENST00000496342 KIR3DS1Q14943 382 aa12.61□□□□□ -0.39
RHBDD3-207ENST00000496342 FFAR4Q5NUL3 377 aa12.61□□□□□ -0.39
RHBDD3-207ENST00000496342 IGF2BP2-AS1Q96M15 143 aa12.61□□□□□ -0.39
RHBDD3-207ENST00000496342 TMEM14CQ9P0S9 112 aa12.61□□□□□ -0.39
RHBDD3-207ENST00000496342 GOLT1BQ9Y3E0 138 aa12.61□□□□□ -0.39
RHBDD3-207ENST00000496342 TRBV19A0A075B6N1 114 aa12.6□□□□□ -0.39
RHBDD3-207ENST00000496342 C17orf112F2Z3M2 114 aa12.6□□□□□ -0.39
RHBDD3-207ENST00000496342 INSP01308 110 aa12.6□□□□□ -0.39
RHBDD3-207ENST00000496342 OXA1LQ15070 435 aa12.6□□□□□ -0.39
RHBDD3-207ENST00000496342 EXOC3-AS1Q8N2X6 119 aa12.6□□□□□ -0.39
RHBDD3-207ENST00000496342 NEU1Q99519 415 aa12.6□□□□□ -0.39
RHBDD3-207ENST00000496342 ZNF705GA8MUZ8 300 aaPredicted RBP12.59□□□□□ -0.39
RHBDD3-207ENST00000496342 IFNA5P01569 189 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms