RNA–Protein interactions for RNA: ENST00000494132.1

ATG4B-224, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 828 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-224ENST00000494132 PRR20BP86481 221 aa10.62□□□□□ -0.71
ATG4B-224ENST00000494132 PRR20AP86496 221 aa10.62□□□□□ -0.71
ATG4B-224ENST00000494132 PSG9Q00887 426 aa10.62□□□□□ -0.71
ATG4B-224ENST00000494132 RAB31Q13636 194 aa10.62□□□□□ -0.71
ATG4B-224ENST00000494132 PXDC1Q5TGL8 231 aa10.62□□□□□ -0.71
ATG4B-224ENST00000494132 Q6ZRG5 221 aa10.62□□□□□ -0.71
ATG4B-224ENST00000494132 MFFQ9GZY8 342 aa10.62□□□□□ -0.71
ATG4B-224ENST00000494132 ALG5Q9Y673 324 aa10.62□□□□□ -0.71
ATG4B-224ENST00000494132 PXMP4Q9Y6I8 212 aa10.62□□□□□ -0.71
ATG4B-224ENST00000494132 A0A087X0K7 114 aa10.61□□□□□ -0.71
ATG4B-224ENST00000494132 SLC17A3O00476 420 aa10.61□□□□□ -0.71
ATG4B-224ENST00000494132 CXCL3P19876 107 aa10.61□□□□□ -0.71
ATG4B-224ENST00000494132 CNN1P51911 297 aaKnown RBP10.61□□□□□ -0.71
ATG4B-224ENST00000494132 CYCSP99999 105 aaKnown RBP10.61□□□□□ -0.71
ATG4B-224ENST00000494132 GCSAMLQ5JQS6 135 aa10.61□□□□□ -0.71
ATG4B-224ENST00000494132 ZNF767PQ75MW2 155 aa10.61□□□□□ -0.71
ATG4B-224ENST00000494132 S100A7AQ86SG5 101 aa10.61□□□□□ -0.71
ATG4B-224ENST00000494132 DNAJC4Q9NNZ3 241 aa10.61□□□□□ -0.71
ATG4B-224ENST00000494132 SLC39A9Q9NUM3 307 aa10.61□□□□□ -0.71
ATG4B-224ENST00000494132 CELA1Q9UNI1 258 aa10.61□□□□□ -0.71
ATG4B-224ENST00000494132 M0R2Z0 102 aa10.6□□□□□ -0.71
ATG4B-224ENST00000494132 MPC2O95563 127 aa10.6□□□□□ -0.71
ATG4B-224ENST00000494132 RPL29P47914 159 aaKnown RBP10.6□□□□□ -0.71
ATG4B-224ENST00000494132 HIST1H1AQ02539 215 aaPredicted RBP10.6□□□□□ -0.71
ATG4B-224ENST00000494132 ATP6V1FQ16864 119 aa10.6□□□□□ -0.71
ATG4B-224ENST00000494132 SPINK13Q1W4C9 94 aa10.6□□□□□ -0.71
ATG4B-224ENST00000494132 AMTNQ6UX39 209 aa10.6□□□□□ -0.71
ATG4B-224ENST00000494132 ZNF705AQ6ZN79 300 aaPredicted RBP10.6□□□□□ -0.71
ATG4B-224ENST00000494132 OR11H7Q8NGC8 314 aa10.6□□□□□ -0.71
ATG4B-224ENST00000494132 RNF126Q9BV68 326 aa10.6□□□□□ -0.71
ATG4B-224ENST00000494132 NPCDR1Q9BY65 106 aa10.6□□□□□ -0.71
ATG4B-224ENST00000494132 SLC25A31Q9H0C2 315 aa10.6□□□□□ -0.71
ATG4B-224ENST00000494132 DNAH1Q9P2D7 4330 aa10.6□□□□□ -0.71
ATG4B-224ENST00000494132 ZNF705FA8MVS1 300 aaPredicted RBP10.59□□□□□ -0.71
ATG4B-224ENST00000494132 H3BQ15 152 aa10.59□□□□□ -0.71
ATG4B-224ENST00000494132 EMP1P54849 157 aa10.59□□□□□ -0.71
ATG4B-224ENST00000494132 PSG3Q16557 428 aa10.59□□□□□ -0.71
ATG4B-224ENST00000494132 SPATA31B1PQ5VZV4 182 aa10.59□□□□□ -0.71
ATG4B-224ENST00000494132 BPIFA4PQ86YQ2 179 aa10.59□□□□□ -0.71
ATG4B-224ENST00000494132 C1orf158Q8N1D5 194 aa10.59□□□□□ -0.71
ATG4B-224ENST00000494132 OR1L4Q8NGR5 311 aa10.59□□□□□ -0.71
ATG4B-224ENST00000494132 SMIM3Q9BZL3 60 aa10.59□□□□□ -0.71
ATG4B-224ENST00000494132 MBD2Q9UBB5 411 aa10.59□□□□□ -0.71
ATG4B-224ENST00000494132 KLK5Q9Y337 293 aaPredicted RBP10.59□□□□□ -0.71
ATG4B-224ENST00000494132 LCN15Q6UWW0 184 aa10.58□□□□□ -0.72
ATG4B-224ENST00000494132 Q6ZTC4 211 aa10.58□□□□□ -0.72
ATG4B-224ENST00000494132 BAP18Q8IXM2 172 aa10.58□□□□□ -0.72
ATG4B-224ENST00000494132 OR8A1Q8NGG7 326 aa10.58□□□□□ -0.72
ATG4B-224ENST00000494132 LINC00476Q8WZB0 136 aa10.58□□□□□ -0.72
ATG4B-224ENST00000494132 RPUSD4Q96CM3 377 aaKnown RBP10.58□□□□□ -0.72
ATG4B-224ENST00000494132 CLUHP3Q96NS8 147 aa10.58□□□□□ -0.72
ATG4B-224ENST00000494132 PFDN5Q99471 154 aa10.58□□□□□ -0.72
ATG4B-224ENST00000494132 ZNF331Q9NQX6 463 aaPredicted RBP10.58□□□□□ -0.72
ATG4B-224ENST00000494132 TRAV12-2A0A075B6T6 113 aa10.57□□□□□ -0.72
ATG4B-224ENST00000494132 A8MTW9 85 aa10.57□□□□□ -0.72
ATG4B-224ENST00000494132 DUSP14O95147 198 aaKnown RBP10.57□□□□□ -0.72
ATG4B-224ENST00000494132 LY6G6CO95867 125 aa10.57□□□□□ -0.72
ATG4B-224ENST00000494132 PTTG1O95997 202 aa10.57□□□□□ -0.72
ATG4B-224ENST00000494132 PRM2P04554 102 aa10.57□□□□□ -0.72
ATG4B-224ENST00000494132 IGLC2P0DOY2 106 aa10.57□□□□□ -0.72
ATG4B-224ENST00000494132 RHOBP62745 196 aa10.57□□□□□ -0.72
ATG4B-224ENST00000494132 RNF24Q9Y225 148 aa10.57□□□□□ -0.72
ATG4B-224ENST00000494132 GOLT1BQ9Y3E0 138 aa10.57□□□□□ -0.72
ATG4B-224ENST00000494132 PRAC2D3DTV9 90 aa10.56□□□□□ -0.72
ATG4B-224ENST00000494132 MPDU1O75352 247 aa10.56□□□□□ -0.72
ATG4B-224ENST00000494132 PYYP10082 97 aa10.56□□□□□ -0.72
ATG4B-224ENST00000494132 SLC50A1Q9BRV3 221 aa10.56□□□□□ -0.72
ATG4B-224ENST00000494132 TMEM208Q9BTX3 173 aa10.56□□□□□ -0.72
ATG4B-224ENST00000494132 PARD6GQ9BYG4 376 aaPredicted RBP10.56□□□□□ -0.72
ATG4B-224ENST00000494132 WDR61Q9GZS3 305 aaKnown RBP10.56□□□□□ -0.72
ATG4B-224ENST00000494132 HRH4Q9H3N8 390 aa10.56□□□□□ -0.72
ATG4B-224ENST00000494132 ZNF586Q9NXT0 402 aa10.56□□□□□ -0.72
ATG4B-224ENST00000494132 HSPB11Q9Y547 144 aa10.56□□□□□ -0.72
ATG4B-224ENST00000494132 BOLA2-SMG1P6H3BVE0 249 aa10.55□□□□□ -0.72
ATG4B-224ENST00000494132 CRXO43186 299 aaPredicted RBP10.55□□□□□ -0.72
ATG4B-224ENST00000494132 PET100P0DJ07 73 aa10.55□□□□□ -0.72
ATG4B-224ENST00000494132 CXCL2P19875 107 aa10.55□□□□□ -0.72
ATG4B-224ENST00000494132 RPL12P30050 165 aaKnown RBP10.55□□□□□ -0.72
ATG4B-224ENST00000494132 FCN2Q15485 313 aa10.55□□□□□ -0.72
ATG4B-224ENST00000494132 C12orf74Q32Q52 190 aa10.55□□□□□ -0.72
ATG4B-224ENST00000494132 MIR17HGQ75NE6 70 aa10.55□□□□□ -0.72
ATG4B-224ENST00000494132 CHAC2Q8WUX2 184 aa10.55□□□□□ -0.72
ATG4B-224ENST00000494132 SAT2Q96F10 170 aaPredicted RBP10.55□□□□□ -0.72
ATG4B-224ENST00000494132 IGF2BP2-AS1Q96M15 143 aa10.55□□□□□ -0.72
ATG4B-224ENST00000494132 NEU1Q99519 415 aa10.55□□□□□ -0.72
ATG4B-224ENST00000494132 ATP5SQ99766 215 aa10.55□□□□□ -0.72
ATG4B-224ENST00000494132 PLA2G2EQ9NZK7 142 aa10.55□□□□□ -0.72
ATG4B-224ENST00000494132 IGLL5B9A064 214 aa10.54□□□□□ -0.72
ATG4B-224ENST00000494132 INSP01308 110 aa10.54□□□□□ -0.72
ATG4B-224ENST00000494132 C2CD4CQ8TF44 421 aa10.54□□□□□ -0.72
ATG4B-224ENST00000494132 BLNKQ8WV28 456 aa10.54□□□□□ -0.72
ATG4B-224ENST00000494132 SLC25A2Q9BXI2 301 aa10.54□□□□□ -0.72
ATG4B-224ENST00000494132 PPP1R14DQ9NXH3 145 aa10.54□□□□□ -0.72
ATG4B-224ENST00000494132 RFNGQ9Y644 331 aa10.54□□□□□ -0.72
ATG4B-224ENST00000494132 LOC102723971A0A1B0GUV8 181 aa10.53□□□□□ -0.72
ATG4B-224ENST00000494132 ZNF705GA8MUZ8 300 aaPredicted RBP10.53□□□□□ -0.72
ATG4B-224ENST00000494132 EIF3GO75821 320 aaKnown RBP eCLIP10.53□□□□□ -0.72
ATG4B-224ENST00000494132 HBE1P02100 147 aa10.53□□□□□ -0.72
ATG4B-224ENST00000494132 KIR3DS1Q14943 382 aa10.53□□□□□ -0.72
ATG4B-224ENST00000494132 MED28Q9H204 178 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms