RNA–Protein interactions for RNA: ENST00000491183.5

HMGN1-219, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 527 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-219ENST00000491183 CST7O76096 145 aa12.81□□□□□ -0.36
HMGN1-219ENST00000491183 SNRPCP09234 159 aaKnown RBP12.81□□□□□ -0.36
HMGN1-219ENST00000491183 BCAP31P51572 246 aa12.81□□□□□ -0.36
HMGN1-219ENST00000491183 PSG3Q16557 428 aa12.81□□□□□ -0.36
HMGN1-219ENST00000491183 MORN5Q5VZ52 161 aa12.81□□□□□ -0.36
HMGN1-219ENST00000491183 LINC00299Q6ZSB3 139 aa12.81□□□□□ -0.36
HMGN1-219ENST00000491183 LINC00305Q7Z4B0 112 aa12.81□□□□□ -0.36
HMGN1-219ENST00000491183 S100A7AQ86SG5 101 aa12.81□□□□□ -0.36
HMGN1-219ENST00000491183 OR8A1Q8NGG7 326 aa12.81□□□□□ -0.36
HMGN1-219ENST00000491183 FAM240BA0A1B0GVZ2 78 aa12.8□□□□□ -0.36
HMGN1-219ENST00000491183 CAV2P51636 162 aa12.8□□□□□ -0.36
HMGN1-219ENST00000491183 TMEM208Q9BTX3 173 aa12.8□□□□□ -0.36
HMGN1-219ENST00000491183 NDUFAF3Q9BU61 184 aa12.8□□□□□ -0.36
HMGN1-219ENST00000491183 TRAV12-2A0A075B6T6 113 aa12.79□□□□□ -0.36
HMGN1-219ENST00000491183 TEX48A0A1B0GUV7 120 aa12.79□□□□□ -0.36
HMGN1-219ENST00000491183 ZNF705GA8MUZ8 300 aaPredicted RBP12.79□□□□□ -0.36
HMGN1-219ENST00000491183 HIST1H1AQ02539 215 aaPredicted RBP12.79□□□□□ -0.36
HMGN1-219ENST00000491183 NRARPQ7Z6K4 114 aa12.79□□□□□ -0.36
HMGN1-219ENST00000491183 BAP18Q8IXM2 172 aa12.79□□□□□ -0.36
HMGN1-219ENST00000491183 LRRC20Q8TCA0 184 aa12.79□□□□□ -0.36
HMGN1-219ENST00000491183 ZNF331Q9NQX6 463 aaPredicted RBP12.79□□□□□ -0.36
HMGN1-219ENST00000491183 RNF24Q9Y225 148 aa12.79□□□□□ -0.36
HMGN1-219ENST00000491183 DNAH6Q9C0G6 4158 aa12.78□□□□□ -0.36
HMGN1-219ENST00000491183 BOLA2-SMG1P6H3BVE0 249 aa12.78□□□□□ -0.36
HMGN1-219ENST00000491183 COX7A2P2O60397 106 aa12.78□□□□□ -0.36
HMGN1-219ENST00000491183 INSP01308 110 aa12.78□□□□□ -0.36
HMGN1-219ENST00000491183 CAMLGP49069 296 aa12.78□□□□□ -0.36
HMGN1-219ENST00000491183 RAB32Q13637 225 aa12.78□□□□□ -0.36
HMGN1-219ENST00000491183 OPCMLQ14982 345 aa12.78□□□□□ -0.36
HMGN1-219ENST00000491183 OXA1LQ15070 435 aa12.78□□□□□ -0.36
HMGN1-219ENST00000491183 WDR83OSQ9Y284 106 aa12.78□□□□□ -0.36
HMGN1-219ENST00000491183 IGSF23A1L1A6 192 aa12.77□□□□□ -0.37
HMGN1-219ENST00000491183 CXCL2P19875 107 aa12.77□□□□□ -0.37
HMGN1-219ENST00000491183 AZU1P20160 251 aa12.77□□□□□ -0.37
HMGN1-219ENST00000491183 RHOBP62745 196 aa12.77□□□□□ -0.37
HMGN1-219ENST00000491183 ASAH1Q13510 395 aa12.77□□□□□ -0.37
HMGN1-219ENST00000491183 VWC2Q2TAL6 325 aa12.77□□□□□ -0.37
HMGN1-219ENST00000491183 C10orf113Q5VZT2 155 aa12.77□□□□□ -0.37
HMGN1-219ENST00000491183 MIC13Q5XKP0 118 aa12.77□□□□□ -0.37
HMGN1-219ENST00000491183 MZT2BQ6NZ67 158 aa12.77□□□□□ -0.37
HMGN1-219ENST00000491183 BPIFA4PQ86YQ2 179 aa12.77□□□□□ -0.37
HMGN1-219ENST00000491183 TMEM252Q8N6L7 170 aa12.77□□□□□ -0.37
HMGN1-219ENST00000491183 POM121L12Q8N7R1 296 aa12.77□□□□□ -0.37
HMGN1-219ENST00000491183 S100ZQ8WXG8 99 aa12.77□□□□□ -0.37
HMGN1-219ENST00000491183 RPUSD4Q96CM3 377 aaKnown RBP12.77□□□□□ -0.37
HMGN1-219ENST00000491183 DNAJC4Q9NNZ3 241 aa12.77□□□□□ -0.37
HMGN1-219ENST00000491183 LYRM2Q9NU23 88 aaPredicted RBP12.77□□□□□ -0.37
HMGN1-219ENST00000491183 TRAV5A0A0B4J249 113 aa12.76□□□□□ -0.37
HMGN1-219ENST00000491183 H3BTX0 84 aa12.76□□□□□ -0.37
HMGN1-219ENST00000491183 P0DMU3 169 aa12.76□□□□□ -0.37
HMGN1-219ENST00000491183 FAM231AP0DMU4 169 aa12.76□□□□□ -0.37
HMGN1-219ENST00000491183 FAM231CP0DMU5 169 aa12.76□□□□□ -0.37
HMGN1-219ENST00000491183 PVALBP20472 110 aaPredicted RBP12.76□□□□□ -0.37
HMGN1-219ENST00000491183 S100A10P60903 97 aa12.76□□□□□ -0.37
HMGN1-219ENST00000491183 LCN15Q6UWW0 184 aa12.76□□□□□ -0.37
HMGN1-219ENST00000491183 FAM210BQ96KR6 192 aa12.76□□□□□ -0.37
HMGN1-219ENST00000491183 UQCC1Q9NVA1 299 aa12.76□□□□□ -0.37
HMGN1-219ENST00000491183 PLAC8L1A1L4L8 177 aa12.75□□□□□ -0.37
HMGN1-219ENST00000491183 H3BQ15 152 aa12.75□□□□□ -0.37
HMGN1-219ENST00000491183 SLC17A3O00476 420 aa12.75□□□□□ -0.37
HMGN1-219ENST00000491183 IGLC2P0DOY2 106 aa12.75□□□□□ -0.37
HMGN1-219ENST00000491183 HTN3P15516 51 aa12.75□□□□□ -0.37
HMGN1-219ENST00000491183 S100A11P31949 105 aa12.75□□□□□ -0.37
HMGN1-219ENST00000491183 SULT1A1P50225 295 aa12.75□□□□□ -0.37
HMGN1-219ENST00000491183 B2MP61769 119 aa12.75□□□□□ -0.37
HMGN1-219ENST00000491183 DAD1P61803 113 aa12.75□□□□□ -0.37
HMGN1-219ENST00000491183 RAB31Q13636 194 aa12.75□□□□□ -0.37
HMGN1-219ENST00000491183 Q6ZRG5 221 aa12.75□□□□□ -0.37
HMGN1-219ENST00000491183 SAT2Q96F10 170 aaPredicted RBP12.75□□□□□ -0.37
HMGN1-219ENST00000491183 SLC50A1Q9BRV3 221 aa12.75□□□□□ -0.37
HMGN1-219ENST00000491183 A6NHS1 94 aa12.74□□□□□ -0.37
HMGN1-219ENST00000491183 PRAC2D3DTV9 90 aa12.74□□□□□ -0.37
HMGN1-219ENST00000491183 TSPOP30536 169 aa12.74□□□□□ -0.37
HMGN1-219ENST00000491183 RPL29P47914 159 aaKnown RBP12.74□□□□□ -0.37
HMGN1-219ENST00000491183 IFITM3Q01628 133 aa12.74□□□□□ -0.37
HMGN1-219ENST00000491183 PPP1R14DQ9NXH3 145 aa12.74□□□□□ -0.37
HMGN1-219ENST00000491183 UBE2L5PA0A1B0GUS4 154 aa12.73□□□□□ -0.37
HMGN1-219ENST00000491183 FCN2Q15485 313 aa12.73□□□□□ -0.37
HMGN1-219ENST00000491183 CHAC2Q8WUX2 184 aa12.73□□□□□ -0.37
HMGN1-219ENST00000491183 LINC01587Q99440 93 aa12.73□□□□□ -0.37
HMGN1-219ENST00000491183 SLC39A9Q9NUM3 307 aa12.73□□□□□ -0.37
HMGN1-219ENST00000491183 LYRM9A8MSI8 78 aa12.72□□□□□ -0.37
HMGN1-219ENST00000491183 UPK1BO75841 260 aa12.72□□□□□ -0.37
HMGN1-219ENST00000491183 SIX6O95475 246 aa12.72□□□□□ -0.37
HMGN1-219ENST00000491183 CDKN1BP46527 198 aa12.72□□□□□ -0.37
HMGN1-219ENST00000491183 BAXQ07812 192 aa12.72□□□□□ -0.37
HMGN1-219ENST00000491183 KIR3DS1Q14943 382 aa12.72□□□□□ -0.37
HMGN1-219ENST00000491183 OR1L4Q8NGR5 311 aa12.72□□□□□ -0.37
HMGN1-219ENST00000491183 PARD6GQ9BYG4 376 aaPredicted RBP12.72□□□□□ -0.37
HMGN1-219ENST00000491183 TAS2R60P59551 318 aa12.71□□□□□ -0.37
HMGN1-219ENST00000491183 HBG1P69891 147 aa12.71□□□□□ -0.37
HMGN1-219ENST00000491183 HBG2P69892 147 aa12.71□□□□□ -0.37
HMGN1-219ENST00000491183 ATP6V1FQ16864 119 aa12.71□□□□□ -0.37
HMGN1-219ENST00000491183 TMEM88Q6PEY1 159 aa12.71□□□□□ -0.37
HMGN1-219ENST00000491183 STX12Q86Y82 276 aa12.71□□□□□ -0.37
HMGN1-219ENST00000491183 TMEM256Q8N2U0 113 aa12.71□□□□□ -0.37
HMGN1-219ENST00000491183 PFDN5Q99471 154 aa12.71□□□□□ -0.37
HMGN1-219ENST00000491183 ZNF586Q9NXT0 402 aa12.71□□□□□ -0.37
HMGN1-219ENST00000491183 PXMP4Q9Y6I8 212 aa12.71□□□□□ -0.37
HMGN1-219ENST00000491183 DEFB130BP0DP73 79 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms