RNA–Protein interactions for RNA: ENST00000489352.5

HDAC6-233, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 585 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-233ENST00000489352 MRPL16Q9NX20 251 aaKnown RBP7.44□□□□□ -1.22
HDAC6-233ENST00000489352 LSM2Q9Y333 95 aaKnown RBP7.44□□□□□ -1.22
HDAC6-233ENST00000489352 KLF12Q9Y4X4 402 aa7.44□□□□□ -1.22
HDAC6-233ENST00000489352 RNF222A6NCQ9 220 aa7.43□□□□□ -1.22
HDAC6-233ENST00000489352 RGS10O43665 173 aa7.43□□□□□ -1.22
HDAC6-233ENST00000489352 ATP6V1G2O95670 118 aa7.43□□□□□ -1.22
HDAC6-233ENST00000489352 CFDP00746 253 aaPredicted RBP7.43□□□□□ -1.22
HDAC6-233ENST00000489352 CXCL3P19876 107 aa7.43□□□□□ -1.22
HDAC6-233ENST00000489352 HRH1P35367 487 aa7.43□□□□□ -1.22
HDAC6-233ENST00000489352 TAS2R46P59540 309 aa7.43□□□□□ -1.22
HDAC6-233ENST00000489352 TOR2AQ5JU69 321 aa7.43□□□□□ -1.22
HDAC6-233ENST00000489352 GGNBP1Q5YKI7 109 aa7.43□□□□□ -1.22
HDAC6-233ENST00000489352 FAM122CQ6P4D5 195 aa7.43□□□□□ -1.22
HDAC6-233ENST00000489352 C8orf59Q8N0T1 100 aaPredicted RBP7.43□□□□□ -1.22
HDAC6-233ENST00000489352 RMI2Q96E14 147 aa7.43□□□□□ -1.22
HDAC6-233ENST00000489352 CTNNBIP1Q9NSA3 81 aaPredicted RBP7.43□□□□□ -1.22
HDAC6-233ENST00000489352 RHBDL2Q9NX52 303 aa7.43□□□□□ -1.22
HDAC6-233ENST00000489352 SLC45A2Q9UMX9 530 aa7.43□□□□□ -1.22
HDAC6-233ENST00000489352 TRAV8-1A0A0A6YYK1 113 aa7.42□□□□□ -1.22
HDAC6-233ENST00000489352 SMIM30A4D0T7 59 aa7.42□□□□□ -1.22
HDAC6-233ENST00000489352 PITX3O75364 302 aa7.42□□□□□ -1.22
HDAC6-233ENST00000489352 ORM2P19652 201 aa7.42□□□□□ -1.22
HDAC6-233ENST00000489352 LEPP41159 167 aa7.42□□□□□ -1.22
HDAC6-233ENST00000489352 C11orf72Q8NBR9 251 aa7.42□□□□□ -1.22
HDAC6-233ENST00000489352 DPH3Q96FX2 82 aa7.42□□□□□ -1.22
HDAC6-233ENST00000489352 TMEM147Q9BVK8 224 aa7.42□□□□□ -1.22
HDAC6-233ENST00000489352 PGAM2P15259 253 aa7.41□□□□□ -1.22
HDAC6-233ENST00000489352 TCL1AP56279 114 aa7.41□□□□□ -1.22
HDAC6-233ENST00000489352 TIRAPP58753 221 aa7.41□□□□□ -1.22
HDAC6-233ENST00000489352 KRTAP10-8P60410 259 aa7.41□□□□□ -1.22
HDAC6-233ENST00000489352 REG3GQ6UW15 175 aa7.41□□□□□ -1.22
HDAC6-233ENST00000489352 DHRSXQ8N5I4 330 aa7.41□□□□□ -1.22
HDAC6-233ENST00000489352 EIF4E3Q8N5X7 224 aaKnown RBP7.41□□□□□ -1.22
HDAC6-233ENST00000489352 FKBP14Q9NWM8 211 aa7.41□□□□□ -1.22
HDAC6-233ENST00000489352 SSR3Q9UNL2 185 aa7.41□□□□□ -1.22
HDAC6-233ENST00000489352 IGKV1D-37A0A075B6S9 117 aa7.4□□□□□ -1.22
HDAC6-233ENST00000489352 GGTLC3B5MD39 225 aa7.4□□□□□ -1.22
HDAC6-233ENST00000489352 RPL7P18124 248 aaKnown RBP7.4□□□□□ -1.22
HDAC6-233ENST00000489352 MLLT11Q13015 90 aaPredicted RBP7.4□□□□□ -1.22
HDAC6-233ENST00000489352 C14orf177Q52M58 125 aa7.4□□□□□ -1.22
HDAC6-233ENST00000489352 WDR73Q6P4I2 378 aa7.4□□□□□ -1.22
HDAC6-233ENST00000489352 IQCF2Q8IXL9 164 aa7.4□□□□□ -1.22
HDAC6-233ENST00000489352 AUNIPQ9H7T9 357 aa7.4□□□□□ -1.22
HDAC6-233ENST00000489352 S100A14Q9HCY8 104 aa7.4□□□□□ -1.22
HDAC6-233ENST00000489352 NOTOA8MTQ0 251 aa7.39□□□□□ -1.23
HDAC6-233ENST00000489352 SFTA3P0C7M3 94 aa7.39□□□□□ -1.23
HDAC6-233ENST00000489352 NAT1P18440 290 aa7.39□□□□□ -1.23
HDAC6-233ENST00000489352 GPX4P36969 197 aaPredicted RBP7.39□□□□□ -1.23
HDAC6-233ENST00000489352 ANXA2RQ3ZCQ2 193 aa7.39□□□□□ -1.23
HDAC6-233ENST00000489352 BPIFCQ8NFQ6 507 aa7.39□□□□□ -1.23
HDAC6-233ENST00000489352 ZNF431Q8TF32 576 aaPredicted RBP7.39□□□□□ -1.23
HDAC6-233ENST00000489352 TMEM170AQ8WVE7 144 aa7.39□□□□□ -1.23
HDAC6-233ENST00000489352 TRGV9Q99603 122 aa7.39□□□□□ -1.23
HDAC6-233ENST00000489352 U3KQ87 197 aa7.39□□□□□ -1.23
HDAC6-233ENST00000489352 IGKV2D-24A0A075B6R9 120 aa7.38□□□□□ -1.23
HDAC6-233ENST00000489352 A0A0A6YYH2 397 aa7.38□□□□□ -1.23
HDAC6-233ENST00000489352 A6NJ64 397 aa7.38□□□□□ -1.23
HDAC6-233ENST00000489352 PFN1P07737 140 aaKnown RBP7.38□□□□□ -1.23
HDAC6-233ENST00000489352 NMSQ5H8A3 153 aa7.38□□□□□ -1.23
HDAC6-233ENST00000489352 IBA57Q5T440 356 aaKnown RBP7.38□□□□□ -1.23
HDAC6-233ENST00000489352 GPR107Q5VW38 600 aa7.38□□□□□ -1.23
HDAC6-233ENST00000489352 LAIR2Q6ISS4 152 aa7.38□□□□□ -1.23
HDAC6-233ENST00000489352 ZNF479Q96JC4 524 aa7.38□□□□□ -1.23
HDAC6-233ENST00000489352 TP53RKQ96S44 253 aa7.38□□□□□ -1.23
HDAC6-233ENST00000489352 ARPC5LQ9BPX5 153 aa7.38□□□□□ -1.23
HDAC6-233ENST00000489352 SCN3BQ9NY72 215 aa7.38□□□□□ -1.23
HDAC6-233ENST00000489352 IGKV1OR2-108A0A075B7D4 117 aa7.37□□□□□ -1.23
HDAC6-233ENST00000489352 C3orf85A0A1B0GTC6 90 aa7.37□□□□□ -1.23
HDAC6-233ENST00000489352 FABP12A6NFH5 140 aa7.37□□□□□ -1.23
HDAC6-233ENST00000489352 PANO1I0J062 215 aa7.37□□□□□ -1.23
HDAC6-233ENST00000489352 RGS13O14921 159 aa7.37□□□□□ -1.23
HDAC6-233ENST00000489352 SLC25A5P05141 298 aaKnown RBP7.37□□□□□ -1.23
HDAC6-233ENST00000489352 RAP2BP61225 183 aa7.37□□□□□ -1.23
HDAC6-233ENST00000489352 LCE2DQ5TA82 110 aaPredicted RBP7.37□□□□□ -1.23
HDAC6-233ENST00000489352 LGI3Q8N145 548 aa7.37□□□□□ -1.23
HDAC6-233ENST00000489352 ZC2HC1AQ96GY0 325 aa7.37□□□□□ -1.23
HDAC6-233ENST00000489352 MGLLQ99685 303 aa7.37□□□□□ -1.23
HDAC6-233ENST00000489352 VCX3BQ9H321 246 aa7.37□□□□□ -1.23
HDAC6-233ENST00000489352 CACFD1Q9UGQ2 172 aa7.37□□□□□ -1.23
HDAC6-233ENST00000489352 A0A0G2JRQ6 117 aa7.36□□□□□ -1.23
HDAC6-233ENST00000489352 LOC100131303A0A0U1RQF7 123 aa7.36□□□□□ -1.23
HDAC6-233ENST00000489352 C7orf71A4D174 169 aa7.36□□□□□ -1.23
HDAC6-233ENST00000489352 ANXA7P20073 488 aaKnown RBP7.36□□□□□ -1.23
HDAC6-233ENST00000489352 HLA-DMAP28067 261 aa7.36□□□□□ -1.23
HDAC6-233ENST00000489352 UCP3P55916 312 aa7.36□□□□□ -1.23
HDAC6-233ENST00000489352 C22orf42Q6IC83 251 aa7.36□□□□□ -1.23
HDAC6-233ENST00000489352 S100A7AQ86SG5 101 aa7.36□□□□□ -1.23
HDAC6-233ENST00000489352 C7orf33Q8WU49 177 aa7.36□□□□□ -1.23
HDAC6-233ENST00000489352 MPDU1O75352 247 aa7.35□□□□□ -1.23
HDAC6-233ENST00000489352 GNAO1P09471 354 aa7.35□□□□□ -1.23
HDAC6-233ENST00000489352 CT45A10P0DMU9 189 aa7.35□□□□□ -1.23
HDAC6-233ENST00000489352 PIGPP57054 158 aa7.35□□□□□ -1.23
HDAC6-233ENST00000489352 VWC2Q2TAL6 325 aa7.35□□□□□ -1.23
HDAC6-233ENST00000489352 SP6Q3SY56 376 aa7.35□□□□□ -1.23
HDAC6-233ENST00000489352 TEPPQ6URK8 271 aa7.35□□□□□ -1.23
HDAC6-233ENST00000489352 OR10G4Q8NGN3 311 aa7.35□□□□□ -1.23
HDAC6-233ENST00000489352 ODF3Q96PU9 254 aa7.35□□□□□ -1.23
HDAC6-233ENST00000489352 VCXQ9H320 206 aa7.35□□□□□ -1.23
HDAC6-233ENST00000489352 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.35□□□□□ -1.23
HDAC6-233ENST00000489352 A0A087X0K7 114 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms