RNA–Protein interactions for RNA: ENST00000488921.5

SPTLC1-207, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 3

Gene SPTLC1, Length 686 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-207ENST00000488921 GOLT1BQ9Y3E0 138 aa9.96□□□□□ -0.82
SPTLC1-207ENST00000488921 EPPK1P58107 5090 aaKnown RBP9.96□□□□□ -0.82
SPTLC1-207ENST00000488921 IGHV3OR16-12A0A075B7B8 117 aa9.95□□□□□ -0.82
SPTLC1-207ENST00000488921 FXYD6-FXYD2A0A087WZ82 144 aa9.95□□□□□ -0.82
SPTLC1-207ENST00000488921 TEX48A0A1B0GUV7 120 aa9.95□□□□□ -0.82
SPTLC1-207ENST00000488921 FAM24AA6NFZ4 105 aa9.95□□□□□ -0.82
SPTLC1-207ENST00000488921 IGLL5B9A064 214 aa9.95□□□□□ -0.82
SPTLC1-207ENST00000488921 F6UB75 175 aa9.95□□□□□ -0.82
SPTLC1-207ENST00000488921 H0YIZ8 118 aa9.95□□□□□ -0.82
SPTLC1-207ENST00000488921 DUSP14O95147 198 aaKnown RBP9.95□□□□□ -0.82
SPTLC1-207ENST00000488921 FXYD7P58549 80 aa9.95□□□□□ -0.82
SPTLC1-207ENST00000488921 HBG1P69891 147 aa9.95□□□□□ -0.82
SPTLC1-207ENST00000488921 HBG2P69892 147 aa9.95□□□□□ -0.82
SPTLC1-207ENST00000488921 SLC38A11Q08AI6 406 aa9.95□□□□□ -0.82
SPTLC1-207ENST00000488921 C20orf173Q96LM9 149 aa9.95□□□□□ -0.82
SPTLC1-207ENST00000488921 SLC35B3Q9H1N7 401 aa9.95□□□□□ -0.82
SPTLC1-207ENST00000488921 RFNGQ9Y644 331 aa9.95□□□□□ -0.82
SPTLC1-207ENST00000488921 A0A087X0K7 114 aa9.94□□□□□ -0.82
SPTLC1-207ENST00000488921 A8MTW9 85 aa9.94□□□□□ -0.82
SPTLC1-207ENST00000488921 AGPAT2O15120 278 aa9.94□□□□□ -0.82
SPTLC1-207ENST00000488921 AMBPP02760 352 aa9.94□□□□□ -0.82
SPTLC1-207ENST00000488921 RPL12P30050 165 aaKnown RBP9.94□□□□□ -0.82
SPTLC1-207ENST00000488921 SULT1A1P50225 295 aa9.94□□□□□ -0.82
SPTLC1-207ENST00000488921 RAB31Q13636 194 aa9.94□□□□□ -0.82
SPTLC1-207ENST00000488921 TCTE3Q8IZS6 198 aa9.94□□□□□ -0.82
SPTLC1-207ENST00000488921 TMEM252Q8N6L7 170 aa9.94□□□□□ -0.82
SPTLC1-207ENST00000488921 ST6GAL2Q96JF0 529 aa9.94□□□□□ -0.82
SPTLC1-207ENST00000488921 UHRF2Q96PU4 802 aa9.94□□□□□ -0.82
SPTLC1-207ENST00000488921 ARV1Q9H2C2 271 aa9.94□□□□□ -0.82
SPTLC1-207ENST00000488921 CELA1Q9UNI1 258 aa9.94□□□□□ -0.82
SPTLC1-207ENST00000488921 HBE1P02100 147 aa9.93□□□□□ -0.82
SPTLC1-207ENST00000488921 SPART-AS1P0CW21 52 aa9.93□□□□□ -0.82
SPTLC1-207ENST00000488921 S100A11P31949 105 aa9.93□□□□□ -0.82
SPTLC1-207ENST00000488921 BAXQ07812 192 aa9.93□□□□□ -0.82
SPTLC1-207ENST00000488921 ARL16Q0P5N6 197 aa9.93□□□□□ -0.82
SPTLC1-207ENST00000488921 Q5BKY6 102 aa9.93□□□□□ -0.82
SPTLC1-207ENST00000488921 ZNF738Q8NE65 137 aa9.93□□□□□ -0.82
SPTLC1-207ENST00000488921 LRRC20Q8TCA0 184 aa9.93□□□□□ -0.82
SPTLC1-207ENST00000488921 C17orf77Q96MU5 243 aa9.93□□□□□ -0.82
SPTLC1-207ENST00000488921 C11orf1Q9H5F2 150 aa9.93□□□□□ -0.82
SPTLC1-207ENST00000488921 DEFB131BA0A096LNP1 70 aa9.92□□□□□ -0.82
SPTLC1-207ENST00000488921 SMLR1H3BR10 107 aa9.92□□□□□ -0.82
SPTLC1-207ENST00000488921 COX7A2P2O60397 106 aa9.92□□□□□ -0.82
SPTLC1-207ENST00000488921 CST7O76096 145 aa9.92□□□□□ -0.82
SPTLC1-207ENST00000488921 CXCL2P19875 107 aa9.92□□□□□ -0.82
SPTLC1-207ENST00000488921 CNN1P51911 297 aaKnown RBP9.92□□□□□ -0.82
SPTLC1-207ENST00000488921 ATP6V1FQ16864 119 aa9.92□□□□□ -0.82
SPTLC1-207ENST00000488921 C12orf74Q32Q52 190 aa9.92□□□□□ -0.82
SPTLC1-207ENST00000488921 LCN15Q6UWW0 184 aa9.92□□□□□ -0.82
SPTLC1-207ENST00000488921 LINC00305Q7Z4B0 112 aa9.92□□□□□ -0.82
SPTLC1-207ENST00000488921 IGF2BP2-AS1Q96M15 143 aa9.92□□□□□ -0.82
SPTLC1-207ENST00000488921 TMEM208Q9BTX3 173 aa9.92□□□□□ -0.82
SPTLC1-207ENST00000488921 APLNQ9ULZ1 77 aa9.92□□□□□ -0.82
SPTLC1-207ENST00000488921 DNAH6Q9C0G6 4158 aa9.92□□□□□ -0.82
SPTLC1-207ENST00000488921 VPS13DQ5THJ4 4388 aa9.91□□□□□ -0.82
SPTLC1-207ENST00000488921 IGHV4-4A0A075B6R2 117 aa9.91□□□□□ -0.82
SPTLC1-207ENST00000488921 TRAV8-2A0A0B4J237 113 aa9.91□□□□□ -0.82
SPTLC1-207ENST00000488921 IGSF23A1L1A6 192 aa9.91□□□□□ -0.82
SPTLC1-207ENST00000488921 INSP01308 110 aa9.91□□□□□ -0.82
SPTLC1-207ENST00000488921 CAMLGP49069 296 aa9.91□□□□□ -0.82
SPTLC1-207ENST00000488921 RRN3P1Q2M238 152 aa9.91□□□□□ -0.82
SPTLC1-207ENST00000488921 ZFP69Q49AA0 526 aa9.91□□□□□ -0.82
SPTLC1-207ENST00000488921 AMTNQ6UX39 209 aa9.91□□□□□ -0.82
SPTLC1-207ENST00000488921 PATE2Q6UY27 113 aa9.91□□□□□ -0.82
SPTLC1-207ENST00000488921 Q6ZRG5 221 aa9.91□□□□□ -0.82
SPTLC1-207ENST00000488921 BPIFA4PQ86YQ2 179 aa9.91□□□□□ -0.82
SPTLC1-207ENST00000488921 RNF182Q8N6D2 247 aa9.91□□□□□ -0.82
SPTLC1-207ENST00000488921 HYLS1Q96M11 299 aa9.91□□□□□ -0.82
SPTLC1-207ENST00000488921 MGST2Q99735 147 aa9.91□□□□□ -0.82
SPTLC1-207ENST00000488921 SLC50A1Q9BRV3 221 aa9.91□□□□□ -0.82
SPTLC1-207ENST00000488921 UQCC1Q9NVA1 299 aa9.91□□□□□ -0.82
SPTLC1-207ENST00000488921 LOC102723971A0A1B0GUV8 181 aa9.9□□□□□ -0.82
SPTLC1-207ENST00000488921 HMSDA8MTL9 139 aa9.9□□□□□ -0.82
SPTLC1-207ENST00000488921 ARPC5O15511 151 aa9.9□□□□□ -0.82
SPTLC1-207ENST00000488921 C1QBP02746 253 aa9.9□□□□□ -0.82
SPTLC1-207ENST00000488921 EMP1P54849 157 aa9.9□□□□□ -0.82
SPTLC1-207ENST00000488921 B2MP61769 119 aa9.9□□□□□ -0.82
SPTLC1-207ENST00000488921 NHLH2Q02577 135 aa9.9□□□□□ -0.82
SPTLC1-207ENST00000488921 PSG3Q16557 428 aa9.9□□□□□ -0.82
SPTLC1-207ENST00000488921 C10orf113Q5VZT2 155 aa9.9□□□□□ -0.82
SPTLC1-207ENST00000488921 IGFL4Q6B9Z1 124 aa9.9□□□□□ -0.82
SPTLC1-207ENST00000488921 ZNF767PQ75MW2 155 aa9.9□□□□□ -0.82
SPTLC1-207ENST00000488921 C1orf158Q8N1D5 194 aa9.9□□□□□ -0.82
SPTLC1-207ENST00000488921 RPP25LQ8N5L8 163 aaKnown RBP9.9□□□□□ -0.82
SPTLC1-207ENST00000488921 OR1L4Q8NGR5 311 aa9.9□□□□□ -0.82
SPTLC1-207ENST00000488921 AQP10Q96PS8 301 aa9.9□□□□□ -0.82
SPTLC1-207ENST00000488921 PFDN5Q99471 154 aa9.9□□□□□ -0.82
SPTLC1-207ENST00000488921 TNFSF18Q9UNG2 199 aa9.9□□□□□ -0.82
SPTLC1-207ENST00000488921 HSPB11Q9Y547 144 aa9.9□□□□□ -0.82
SPTLC1-207ENST00000488921 BOLA2-SMG1P6H3BVE0 249 aa9.89□□□□□ -0.83
SPTLC1-207ENST00000488921 MRPS12O15235 138 aaKnown RBP9.89□□□□□ -0.83
SPTLC1-207ENST00000488921 HIST1H1AQ02539 215 aaPredicted RBP9.89□□□□□ -0.83
SPTLC1-207ENST00000488921 SPINK13Q1W4C9 94 aa9.89□□□□□ -0.83
SPTLC1-207ENST00000488921 OR8A1Q8NGG7 326 aa9.89□□□□□ -0.83
SPTLC1-207ENST00000488921 OR5C1Q8NGR4 320 aa9.89□□□□□ -0.83
SPTLC1-207ENST00000488921 NIPSNAP3BQ9BS92 247 aa9.89□□□□□ -0.83
SPTLC1-207ENST00000488921 PPP1R14DQ9NXH3 145 aa9.89□□□□□ -0.83
SPTLC1-207ENST00000488921 DKK2Q9UBU2 259 aa9.89□□□□□ -0.83
SPTLC1-207ENST00000488921 WDR83OSQ9Y284 106 aa9.89□□□□□ -0.83
SPTLC1-207ENST00000488921 FRAS1Q86XX4 4008 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms