RNA–Protein interactions for RNA: ENST00000488727.5

CCM2-216, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 1,719 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-216ENST00000488727 K7EN84 100 aa14.92□□□□□ -0.02
CCM2-216ENST00000488727 IGHV3-11P01762 117 aa14.92□□□□□ -0.02
CCM2-216ENST00000488727 OR10J4P0C629 311 aa14.92□□□□□ -0.02
CCM2-216ENST00000488727 CRYBB3P26998 211 aa14.92□□□□□ -0.02
CCM2-216ENST00000488727 S100A12P80511 92 aa14.92□□□□□ -0.02
CCM2-216ENST00000488727 HIST3H2BBQ8N257 126 aa14.92□□□□□ -0.02
CCM2-216ENST00000488727 TRAV5A0A0B4J249 113 aa14.92□□□□□ -0.02
CCM2-216ENST00000488727 PLP1P60201 277 aa14.92□□□□□ -0.02
CCM2-216ENST00000488727 C8orf86Q6ZUL3 223 aa14.92□□□□□ -0.02
CCM2-216ENST00000488727 PAXXQ9BUH6 204 aa14.92□□□□□ -0.02
CCM2-216ENST00000488727 FBXL7Q9UJT9 491 aa14.92□□□□□ -0.02
CCM2-216ENST00000488727 HELTA6NFD8 242 aa14.91□□□□□ -0.02
CCM2-216ENST00000488727 FAM223BA6NKX1 122 aa14.91□□□□□ -0.02
CCM2-216ENST00000488727 NDUFB8O95169 186 aa14.91□□□□□ -0.02
CCM2-216ENST00000488727 IGHV3-48P01763 117 aa14.91□□□□□ -0.02
CCM2-216ENST00000488727 FAM223AQ8IWN6 122 aa14.91□□□□□ -0.02
CCM2-216ENST00000488727 STXBP6Q8NFX7 210 aa14.91□□□□□ -0.02
CCM2-216ENST00000488727 C4orf3Q8WVX3 66 aa14.91□□□□□ -0.02
CCM2-216ENST00000488727 GAR1Q9NY12 217 aaKnown RBP14.91□□□□□ -0.02
CCM2-216ENST00000488727 VWFP04275 2813 aa14.9□□□□□ -0.02
CCM2-216ENST00000488727 HIST1H1BP16401 226 aaKnown RBP14.9□□□□□ -0.02
CCM2-216ENST00000488727 GNG4P50150 75 aa14.9□□□□□ -0.02
CCM2-216ENST00000488727 DEFB136Q30KP8 78 aa14.9□□□□□ -0.02
CCM2-216ENST00000488727 C15orf32Q32M92 178 aa14.9□□□□□ -0.02
CCM2-216ENST00000488727 CENPWQ5EE01 88 aa14.9□□□□□ -0.02
CCM2-216ENST00000488727 COA6Q5JTJ3 125 aaKnown RBP14.9□□□□□ -0.02
CCM2-216ENST00000488727 USMG5Q96IX5 58 aa14.9□□□□□ -0.02
CCM2-216ENST00000488727 OR51M1Q9H341 326 aa14.9□□□□□ -0.02
CCM2-216ENST00000488727 IL36BQ9NZH7 164 aa14.9□□□□□ -0.02
CCM2-216ENST00000488727 A0A0G2JLM5 398 aa14.89□□□□□ -0.03
CCM2-216ENST00000488727 S100A2P29034 98 aa14.89□□□□□ -0.03
CCM2-216ENST00000488727 SUMO1P63165 101 aaKnown RBP14.89□□□□□ -0.03
CCM2-216ENST00000488727 FXYD5Q96DB9 178 aa14.89□□□□□ -0.03
CCM2-216ENST00000488727 S4R3C0 116 aa14.89□□□□□ -0.03
CCM2-216ENST00000488727 LGALS1P09382 135 aaKnown RBP14.89□□□□□ -0.03
CCM2-216ENST00000488727 TAS2R60P59551 318 aa14.89□□□□□ -0.03
CCM2-216ENST00000488727 ATP5G2Q06055 141 aa14.89□□□□□ -0.03
CCM2-216ENST00000488727 LINC00305Q7Z4B0 112 aa14.89□□□□□ -0.03
CCM2-216ENST00000488727 OR1L6Q8NGR2 347 aa14.89□□□□□ -0.03
CCM2-216ENST00000488727 IGF2BP2-AS1Q96M15 143 aa14.89□□□□□ -0.03
CCM2-216ENST00000488727 TRRAPQ9Y4A5 3859 aa14.88□□□□□ -0.03
CCM2-216ENST00000488727 I3L2K1 104 aa14.88□□□□□ -0.03
CCM2-216ENST00000488727 DUX3Q96PT4 197 aa14.88□□□□□ -0.03
CCM2-216ENST00000488727 WNK1Q9H4A3 2382 aa14.88□□□□□ -0.03
CCM2-216ENST00000488727 ZNF320A2RRD8 509 aa14.87□□□□□ -0.03
CCM2-216ENST00000488727 PCP4L1A6NKN8 68 aa14.87□□□□□ -0.03
CCM2-216ENST00000488727 K7EIM0 57 aa14.87□□□□□ -0.03
CCM2-216ENST00000488727 GCGP01275 180 aa14.87□□□□□ -0.03
CCM2-216ENST00000488727 PYYP10082 97 aa14.87□□□□□ -0.03
CCM2-216ENST00000488727 TIGITQ495A1 244 aa14.87□□□□□ -0.03
CCM2-216ENST00000488727 TMEM183AQ8IXX5 376 aa14.87□□□□□ -0.03
CCM2-216ENST00000488727 RAX2Q96IS3 184 aa14.87□□□□□ -0.03
CCM2-216ENST00000488727 OSTCQ9NRP0 149 aa14.87□□□□□ -0.03
CCM2-216ENST00000488727 THYN1Q9P016 225 aa14.87□□□□□ -0.03
CCM2-216ENST00000488727 IGHV3-21A0A0B4J1V1 117 aa14.86□□□□□ -0.03
CCM2-216ENST00000488727 M0QZ24 198 aa14.86□□□□□ -0.03
CCM2-216ENST00000488727 HYPMO75409 117 aa14.86□□□□□ -0.03
CCM2-216ENST00000488727 IGHV3-23P01764 117 aa14.86□□□□□ -0.03
CCM2-216ENST00000488727 IGLC1P0CG04 106 aa14.86□□□□□ -0.03
CCM2-216ENST00000488727 MYCNOSP40205 109 aa14.86□□□□□ -0.03
CCM2-216ENST00000488727 GFI1BQ5VTD9 330 aa14.86□□□□□ -0.03
CCM2-216ENST00000488727 CCDC140Q96MF4 163 aa14.86□□□□□ -0.03
CCM2-216ENST00000488727 GPR61Q9BZJ8 451 aa14.86□□□□□ -0.03
CCM2-216ENST00000488727 V9GYV3 84 aa14.86□□□□□ -0.03
CCM2-216ENST00000488727 IGLV2-8P01709 118 aa14.86□□□□□ -0.03
CCM2-216ENST00000488727 TRBV12-3P01733 135 aa14.86□□□□□ -0.03
CCM2-216ENST00000488727 OR1B1Q8NGR6 318 aa14.86□□□□□ -0.03
CCM2-216ENST00000488727 ORM2P19652 201 aa14.85□□□□□ -0.03
CCM2-216ENST00000488727 YPEL3P61236 119 aaPredicted RBP14.85□□□□□ -0.03
CCM2-216ENST00000488727 OR11H1Q8NG94 326 aa14.85□□□□□ -0.03
CCM2-216ENST00000488727 OR4F17Q8NGA8 305 aa14.85□□□□□ -0.03
CCM2-216ENST00000488727 IGHV4OR15-8A0A075B7B6 117 aa14.84□□□□□ -0.03
CCM2-216ENST00000488727 A0A087WW49 117 aa14.84□□□□□ -0.03
CCM2-216ENST00000488727 ISLRO14498 428 aa14.84□□□□□ -0.03
CCM2-216ENST00000488727 ERVFC1-1P60608 527 aa14.84□□□□□ -0.03
CCM2-216ENST00000488727 ZNF502Q8TBZ5 544 aa14.84□□□□□ -0.03
CCM2-216ENST00000488727 VN1R17PQ8TDU5 208 aa14.84□□□□□ -0.03
CCM2-216ENST00000488727 NIT2Q9NQR4 276 aa14.84□□□□□ -0.03
CCM2-216ENST00000488727 CCL24O00175 119 aa14.83□□□□□ -0.03
CCM2-216ENST00000488727 PEX7O00628 323 aa14.83□□□□□ -0.03
CCM2-216ENST00000488727 CNN1P51911 297 aaKnown RBP14.83□□□□□ -0.03
CCM2-216ENST00000488727 FHL3Q13643 280 aa14.83□□□□□ -0.03
CCM2-216ENST00000488727 RPEL1Q2QD12 228 aa14.83□□□□□ -0.03
CCM2-216ENST00000488727 EEF1AKMT3Q96AZ1 226 aa14.83□□□□□ -0.03
CCM2-216ENST00000488727 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP14.83□□□□□ -0.04
CCM2-216ENST00000488727 XKRY2A2RUG3 117 aa14.83□□□□□ -0.04
CCM2-216ENST00000488727 SLC17A3O00476 420 aa14.83□□□□□ -0.04
CCM2-216ENST00000488727 FABP1P07148 127 aa14.83□□□□□ -0.04
CCM2-216ENST00000488727 GP9P14770 177 aa14.83□□□□□ -0.04
CCM2-216ENST00000488727 OR5I1Q13606 314 aa14.83□□□□□ -0.04
CCM2-216ENST00000488727 DNLZQ5SXM8 178 aa14.83□□□□□ -0.04
CCM2-216ENST00000488727 CLEC19AQ6UXS0 136 aa14.83□□□□□ -0.04
CCM2-216ENST00000488727 OR1N2Q8NGR9 330 aa14.83□□□□□ -0.04
CCM2-216ENST00000488727 TRAPPC1Q9Y5R8 145 aa14.83□□□□□ -0.04
CCM2-216ENST00000488727 F8W735 103 aaPredicted RBP14.82□□□□□ -0.04
CCM2-216ENST00000488727 OR10D4PQ8NGN7 298 aa14.82□□□□□ -0.04
CCM2-216ENST00000488727 TMEM190Q8WZ59 177 aa14.82□□□□□ -0.04
CCM2-216ENST00000488727 C21orf62Q9NYP8 219 aa14.82□□□□□ -0.04
CCM2-216ENST00000488727 PEF1Q9UBV8 284 aaKnown RBP14.82□□□□□ -0.04
CCM2-216ENST00000488727 HIGD1AQ9Y241 93 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms