RNA–Protein interactions for RNA: ENST00000471496.5

LINC00888-202, long intergenic non-protein coding RNA 888, humanhuman

TSL 3 BASIC

Gene LINC00888, Length 1,490 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00888-202ENST00000471496 HLA-DRB4P13762 266 aa9.03□□□□□ -0.96
LINC00888-202ENST00000471496 ID1P41134 155 aa9.03□□□□□ -0.96
LINC00888-202ENST00000471496 GCSAMLQ5JQS6 135 aa9.03□□□□□ -0.96
LINC00888-202ENST00000471496 IGFL4Q6B9Z1 124 aa9.03□□□□□ -0.96
LINC00888-202ENST00000471496 Q6ZRG5 221 aa9.03□□□□□ -0.96
LINC00888-202ENST00000471496 LINC00052Q96N35 136 aa9.03□□□□□ -0.96
LINC00888-202ENST00000471496 SAV1Q9H4B6 383 aaPredicted RBP9.03□□□□□ -0.96
LINC00888-202ENST00000471496 HLA-DRB4X5D2U9 266 aa9.03□□□□□ -0.96
LINC00888-202ENST00000471496 TRAV5A0A0B4J249 113 aa9.02□□□□□ -0.96
LINC00888-202ENST00000471496 F6UB75 175 aa9.02□□□□□ -0.96
LINC00888-202ENST00000471496 CA1P00915 261 aaPredicted RBP9.02□□□□□ -0.96
LINC00888-202ENST00000471496 IGLC2P0DOY2 106 aa9.02□□□□□ -0.96
LINC00888-202ENST00000471496 SPP1P10451 314 aa9.02□□□□□ -0.96
LINC00888-202ENST00000471496 SAMD13Q5VXD3 122 aa9.02□□□□□ -0.96
LINC00888-202ENST00000471496 S100A7AQ86SG5 101 aa9.02□□□□□ -0.96
LINC00888-202ENST00000471496 OR1L4Q8NGR5 311 aa9.02□□□□□ -0.96
LINC00888-202ENST00000471496 GATAD1Q8WUU5 269 aa9.02□□□□□ -0.96
LINC00888-202ENST00000471496 RNF141Q8WVD5 230 aa9.02□□□□□ -0.96
LINC00888-202ENST00000471496 ASB13Q8WXK3 278 aa9.02□□□□□ -0.96
LINC00888-202ENST00000471496 C16orf92Q96LL3 132 aa9.02□□□□□ -0.96
LINC00888-202ENST00000471496 PFDN5Q99471 154 aa9.02□□□□□ -0.96
LINC00888-202ENST00000471496 SMIM3Q9BZL3 60 aa9.02□□□□□ -0.96
LINC00888-202ENST00000471496 A0A0J9YX75 114 aa9.02□□□□□ -0.97
LINC00888-202ENST00000471496 A8MTW9 85 aa9.02□□□□□ -0.97
LINC00888-202ENST00000471496 H3BQ15 152 aa9.02□□□□□ -0.97
LINC00888-202ENST00000471496 ATF4P18848 351 aaPredicted RBP9.02□□□□□ -0.97
LINC00888-202ENST00000471496 HLA-DMBP28068 263 aa9.02□□□□□ -0.97
LINC00888-202ENST00000471496 MORN3Q6PF18 240 aaPredicted RBP9.02□□□□□ -0.97
LINC00888-202ENST00000471496 FOXI2Q6ZQN5 318 aa9.02□□□□□ -0.97
LINC00888-202ENST00000471496 RNF182Q8N6D2 247 aa9.02□□□□□ -0.97
LINC00888-202ENST00000471496 CSNK1G2-AS1Q8NCQ2 148 aa9.02□□□□□ -0.97
LINC00888-202ENST00000471496 MUC7Q8TAX7 377 aa9.02□□□□□ -0.97
LINC00888-202ENST00000471496 CLUHP3Q96NS8 147 aa9.02□□□□□ -0.97
LINC00888-202ENST00000471496 AQP10Q96PS8 301 aa9.02□□□□□ -0.97
LINC00888-202ENST00000471496 RNF24Q9Y225 148 aa9.02□□□□□ -0.97
LINC00888-202ENST00000471496 RFNGQ9Y644 331 aa9.02□□□□□ -0.97
LINC00888-202ENST00000471496 TENM2Q9NT68 2774 aa9.01□□□□□ -0.97
LINC00888-202ENST00000471496 SNRPCP09234 159 aaKnown RBP9.01□□□□□ -0.97
LINC00888-202ENST00000471496 FGL1Q08830 312 aa9.01□□□□□ -0.97
LINC00888-202ENST00000471496 BPIFA4PQ86YQ2 179 aa9.01□□□□□ -0.97
LINC00888-202ENST00000471496 PARD6GQ9BYG4 376 aaPredicted RBP9.01□□□□□ -0.97
LINC00888-202ENST00000471496 ZNF331Q9NQX6 463 aaPredicted RBP9.01□□□□□ -0.97
LINC00888-202ENST00000471496 RPRMQ9NS64 109 aa9.01□□□□□ -0.97
LINC00888-202ENST00000471496 STARD9Q9P2P6 4700 aa9□□□□□ -0.97
LINC00888-202ENST00000471496 SLC17A3O00476 420 aa9□□□□□ -0.97
LINC00888-202ENST00000471496 SPATA31B1PQ5VZV4 182 aa9□□□□□ -0.97
LINC00888-202ENST00000471496 ZNF709Q8N972 641 aa9□□□□□ -0.97
LINC00888-202ENST00000471496 SAT2Q96F10 170 aaPredicted RBP9□□□□□ -0.97
LINC00888-202ENST00000471496 FAM167A-AS1Q96KT0 104 aa9□□□□□ -0.97
LINC00888-202ENST00000471496 HRH4Q9H3N8 390 aa9□□□□□ -0.97
LINC00888-202ENST00000471496 A0A0J9YWU9 116 aa8.99□□□□□ -0.97
LINC00888-202ENST00000471496 RNF222A6NCQ9 220 aa8.99□□□□□ -0.97
LINC00888-202ENST00000471496 C3orf84H3BNL1 204 aa8.99□□□□□ -0.97
LINC00888-202ENST00000471496 H3BTX0 84 aa8.99□□□□□ -0.97
LINC00888-202ENST00000471496 IGKV3-20P01619 116 aa8.99□□□□□ -0.97
LINC00888-202ENST00000471496 CXCL2P19875 107 aa8.99□□□□□ -0.97
LINC00888-202ENST00000471496 TMEM41BQ5BJD5 291 aa8.99□□□□□ -0.97
LINC00888-202ENST00000471496 FAM78BQ5VT40 261 aa8.99□□□□□ -0.97
LINC00888-202ENST00000471496 AMTNQ6UX39 209 aa8.99□□□□□ -0.97
LINC00888-202ENST00000471496 MIR17HGQ75NE6 70 aa8.99□□□□□ -0.97
LINC00888-202ENST00000471496 OR2T35Q8NGX2 323 aa8.99□□□□□ -0.97
LINC00888-202ENST00000471496 ZNF586Q9NXT0 402 aa8.99□□□□□ -0.97
LINC00888-202ENST00000471496 CLEC5AQ9NY25 188 aa8.99□□□□□ -0.97
LINC00888-202ENST00000471496 TMEM14CQ9P0S9 112 aa8.99□□□□□ -0.97
LINC00888-202ENST00000471496 KMT2CQ8NEZ4 4911 aaKnown RBP8.99□□□□□ -0.97
LINC00888-202ENST00000471496 ZNF705DP0CH99 300 aaPredicted RBP8.98□□□□□ -0.97
LINC00888-202ENST00000471496 ZNF705BP0CI00 300 aaPredicted RBP8.98□□□□□ -0.97
LINC00888-202ENST00000471496 PSG3Q16557 428 aa8.98□□□□□ -0.97
LINC00888-202ENST00000471496 CASC10Q5T4H9 136 aa8.98□□□□□ -0.97
LINC00888-202ENST00000471496 LCN15Q6UWW0 184 aa8.98□□□□□ -0.97
LINC00888-202ENST00000471496 OR11H2Q8NH07 326 aa8.98□□□□□ -0.97
LINC00888-202ENST00000471496 RARRES2Q99969 163 aa8.98□□□□□ -0.97
LINC00888-202ENST00000471496 SLC25A2Q9BXI2 301 aa8.98□□□□□ -0.97
LINC00888-202ENST00000471496 SLC35B3Q9H1N7 401 aa8.98□□□□□ -0.97
LINC00888-202ENST00000471496 KCNIP2Q9NS61 270 aa8.98□□□□□ -0.97
LINC00888-202ENST00000471496 TNFSF18Q9UNG2 199 aa8.98□□□□□ -0.97
LINC00888-202ENST00000471496 X6R8D5 127 aa8.98□□□□□ -0.97
LINC00888-202ENST00000471496 ZNF705EA8MWA4 302 aaPredicted RBP8.97□□□□□ -0.97
LINC00888-202ENST00000471496 C17orf112F2Z3M2 114 aa8.97□□□□□ -0.97
LINC00888-202ENST00000471496 NDUFB4O95168 129 aa8.97□□□□□ -0.97
LINC00888-202ENST00000471496 IFNA5P01569 189 aa8.97□□□□□ -0.97
LINC00888-202ENST00000471496 PYYP10082 97 aa8.97□□□□□ -0.97
LINC00888-202ENST00000471496 PRB4P10163 310 aaPredicted RBP8.97□□□□□ -0.97
LINC00888-202ENST00000471496 FXYD7P58549 80 aa8.97□□□□□ -0.97
LINC00888-202ENST00000471496 EBLN2Q6P2I7 272 aa8.97□□□□□ -0.97
LINC00888-202ENST00000471496 ZNF738Q8NE65 137 aa8.97□□□□□ -0.97
LINC00888-202ENST00000471496 OR4B1Q8NGF8 309 aa8.97□□□□□ -0.97
LINC00888-202ENST00000471496 SCGB1C1Q8TD33 95 aa8.97□□□□□ -0.97
LINC00888-202ENST00000471496 SLC50A1Q9BRV3 221 aa8.97□□□□□ -0.97
LINC00888-202ENST00000471496 XCL2Q9UBD3 114 aa8.97□□□□□ -0.97
LINC00888-202ENST00000471496 TRBV19A0A075B6N1 114 aa8.96□□□□□ -0.97
LINC00888-202ENST00000471496 CNN1P51911 297 aaKnown RBP8.96□□□□□ -0.97
LINC00888-202ENST00000471496 NUTF2P61970 127 aaKnown RBP8.96□□□□□ -0.97
LINC00888-202ENST00000471496 GUK1Q16774 197 aa8.96□□□□□ -0.97
LINC00888-202ENST00000471496 FFAR4Q5NUL3 377 aa8.96□□□□□ -0.97
LINC00888-202ENST00000471496 Q8NAQ8 132 aa8.96□□□□□ -0.97
LINC00888-202ENST00000471496 ZNF503Q96F45 646 aa8.96□□□□□ -0.97
LINC00888-202ENST00000471496 FXYD6-FXYD2A0A087WZ82 144 aa8.96□□□□□ -0.98
LINC00888-202ENST00000471496 ZNF705FA8MVS1 300 aaPredicted RBP8.96□□□□□ -0.98
LINC00888-202ENST00000471496 PRAC2D3DTV9 90 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 89.7 ms