RNA–Protein interactions for RNA: ENST00000463041.1

PTPRF-210, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 3

Gene PTPRF, Length 298 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-210ENST00000463041 Q6ZRG5 221 aa5.2□□□□□ -1.58
PTPRF-210ENST00000463041 ZNF767PQ75MW2 155 aa5.2□□□□□ -1.58
PTPRF-210ENST00000463041 LINC00305Q7Z4B0 112 aa5.2□□□□□ -1.58
PTPRF-210ENST00000463041 BPIFA4PQ86YQ2 179 aa5.2□□□□□ -1.58
PTPRF-210ENST00000463041 ZNF738Q8NE65 137 aa5.2□□□□□ -1.58
PTPRF-210ENST00000463041 OR11H7Q8NGC8 314 aa5.2□□□□□ -1.58
PTPRF-210ENST00000463041 OR8A1Q8NGG7 326 aa5.2□□□□□ -1.58
PTPRF-210ENST00000463041 S100ZQ8WXG8 99 aa5.2□□□□□ -1.58
PTPRF-210ENST00000463041 UHRF2Q96PU4 802 aa5.2□□□□□ -1.58
PTPRF-210ENST00000463041 TMEM208Q9BTX3 173 aa5.2□□□□□ -1.58
PTPRF-210ENST00000463041 DNAJC4Q9NNZ3 241 aa5.2□□□□□ -1.58
PTPRF-210ENST00000463041 NUDT15Q9NV35 164 aa5.2□□□□□ -1.58
PTPRF-210ENST00000463041 PPP1R14DQ9NXH3 145 aa5.2□□□□□ -1.58
PTPRF-210ENST00000463041 LSM5Q9Y4Y9 91 aaKnown RBP5.2□□□□□ -1.58
PTPRF-210ENST00000463041 HECTD4Q9Y4D8 3996 aa5.19□□□□□ -1.58
PTPRF-210ENST00000463041 FAM24AA6NFZ4 105 aa5.19□□□□□ -1.58
PTPRF-210ENST00000463041 CCSO14618 274 aa5.19□□□□□ -1.58
PTPRF-210ENST00000463041 MRPS12O15235 138 aaKnown RBP5.19□□□□□ -1.58
PTPRF-210ENST00000463041 CRXO43186 299 aaPredicted RBP5.19□□□□□ -1.58
PTPRF-210ENST00000463041 COX7A2P2O60397 106 aa5.19□□□□□ -1.58
PTPRF-210ENST00000463041 TSPOP30536 169 aa5.19□□□□□ -1.58
PTPRF-210ENST00000463041 CAMLGP49069 296 aa5.19□□□□□ -1.58
PTPRF-210ENST00000463041 RHOBP62745 196 aa5.19□□□□□ -1.58
PTPRF-210ENST00000463041 IL15RAQ13261 267 aa5.19□□□□□ -1.58
PTPRF-210ENST00000463041 ATP6V1FQ16864 119 aa5.19□□□□□ -1.58
PTPRF-210ENST00000463041 C10orf113Q5VZT2 155 aa5.19□□□□□ -1.58
PTPRF-210ENST00000463041 LCN15Q6UWW0 184 aa5.19□□□□□ -1.58
PTPRF-210ENST00000463041 TMEM256Q8N2U0 113 aa5.19□□□□□ -1.58
PTPRF-210ENST00000463041 RNF182Q8N6D2 247 aa5.19□□□□□ -1.58
PTPRF-210ENST00000463041 POM121L12Q8N7R1 296 aa5.19□□□□□ -1.58
PTPRF-210ENST00000463041 CHAC2Q8WUX2 184 aa5.19□□□□□ -1.58
PTPRF-210ENST00000463041 TMEM37Q8WXS4 190 aa5.19□□□□□ -1.58
PTPRF-210ENST00000463041 MGST2Q99735 147 aa5.19□□□□□ -1.58
PTPRF-210ENST00000463041 SEC22CQ9BRL7 303 aa5.19□□□□□ -1.58
PTPRF-210ENST00000463041 SLC50A1Q9BRV3 221 aa5.19□□□□□ -1.58
PTPRF-210ENST00000463041 C11orf1Q9H5F2 150 aa5.19□□□□□ -1.58
PTPRF-210ENST00000463041 ZNF331Q9NQX6 463 aaPredicted RBP5.19□□□□□ -1.58
PTPRF-210ENST00000463041 YTHDF2Q9Y5A9 579 aaKnown RBP5.19□□□□□ -1.58
PTPRF-210ENST00000463041 DNAH2Q9P225 4427 aa5.18□□□□□ -1.58
PTPRF-210ENST00000463041 LYRM9A8MSI8 78 aa5.18□□□□□ -1.58
PTPRF-210ENST00000463041 BOLA2-SMG1P6H3BVE0 249 aa5.18□□□□□ -1.58
PTPRF-210ENST00000463041 M0R2Z0 102 aa5.18□□□□□ -1.58
PTPRF-210ENST00000463041 CST7O76096 145 aa5.18□□□□□ -1.58
PTPRF-210ENST00000463041 INSP01308 110 aa5.18□□□□□ -1.58
PTPRF-210ENST00000463041 RLN2P04090 185 aa5.18□□□□□ -1.58
PTPRF-210ENST00000463041 RPL29P47914 159 aaKnown RBP5.18□□□□□ -1.58
PTPRF-210ENST00000463041 SULT1A1P50225 295 aa5.18□□□□□ -1.58
PTPRF-210ENST00000463041 CAV2P51636 162 aa5.18□□□□□ -1.58
PTPRF-210ENST00000463041 DAD1P61803 113 aa5.18□□□□□ -1.58
PTPRF-210ENST00000463041 HBG1P69891 147 aa5.18□□□□□ -1.58
PTPRF-210ENST00000463041 HBG2P69892 147 aa5.18□□□□□ -1.58
PTPRF-210ENST00000463041 ASAH1Q13510 395 aa5.18□□□□□ -1.58
PTPRF-210ENST00000463041 GUK1Q16774 197 aa5.18□□□□□ -1.58
PTPRF-210ENST00000463041 SPINK13Q1W4C9 94 aa5.18□□□□□ -1.58
PTPRF-210ENST00000463041 VWC2Q2TAL6 325 aa5.18□□□□□ -1.58
PTPRF-210ENST00000463041 NRARPQ7Z6K4 114 aa5.18□□□□□ -1.58
PTPRF-210ENST00000463041 TMEM252Q8N6L7 170 aa5.18□□□□□ -1.58
PTPRF-210ENST00000463041 OR1L4Q8NGR5 311 aa5.18□□□□□ -1.58
PTPRF-210ENST00000463041 RPUSD4Q96CM3 377 aaKnown RBP5.18□□□□□ -1.58
PTPRF-210ENST00000463041 LINC01587Q99440 93 aa5.18□□□□□ -1.58
PTPRF-210ENST00000463041 PFDN5Q99471 154 aa5.18□□□□□ -1.58
PTPRF-210ENST00000463041 UQCC1Q9NVA1 299 aa5.18□□□□□ -1.58
PTPRF-210ENST00000463041 PLA2G2EQ9NZK7 142 aa5.18□□□□□ -1.58
PTPRF-210ENST00000463041 WDR83OSQ9Y284 106 aa5.18□□□□□ -1.58
PTPRF-210ENST00000463041 PXMP4Q9Y6I8 212 aa5.18□□□□□ -1.58
PTPRF-210ENST00000463041 ZNF705GA8MUZ8 300 aaPredicted RBP5.17□□□□□ -1.58
PTPRF-210ENST00000463041 MPDU1O75352 247 aa5.17□□□□□ -1.58
PTPRF-210ENST00000463041 CDKN1BP46527 198 aa5.17□□□□□ -1.58
PTPRF-210ENST00000463041 TAS2R60P59551 318 aa5.17□□□□□ -1.58
PTPRF-210ENST00000463041 HIST1H1AQ02539 215 aaPredicted RBP5.17□□□□□ -1.58
PTPRF-210ENST00000463041 RAB32Q13637 225 aa5.17□□□□□ -1.58
PTPRF-210ENST00000463041 OPCMLQ14982 345 aa5.17□□□□□ -1.58
PTPRF-210ENST00000463041 RNF212Q495C1 297 aa5.17□□□□□ -1.58
PTPRF-210ENST00000463041 MIC13Q5XKP0 118 aa5.17□□□□□ -1.58
PTPRF-210ENST00000463041 ZNF493Q6ZR52 646 aa5.17□□□□□ -1.58
PTPRF-210ENST00000463041 LINC00336Q6ZUF6 198 aa5.17□□□□□ -1.58
PTPRF-210ENST00000463041 STX12Q86Y82 276 aa5.17□□□□□ -1.58
PTPRF-210ENST00000463041 OR10J6PQ8NGY7 276 aa5.17□□□□□ -1.58
PTPRF-210ENST00000463041 SAT2Q96F10 170 aaPredicted RBP5.17□□□□□ -1.58
PTPRF-210ENST00000463041 C20orf144Q9BQM9 153 aa5.17□□□□□ -1.58
PTPRF-210ENST00000463041 GPN1Q9HCN4 374 aaPredicted RBP5.17□□□□□ -1.58
PTPRF-210ENST00000463041 LYRM2Q9NU23 88 aaPredicted RBP5.17□□□□□ -1.58
PTPRF-210ENST00000463041 FAT2Q9NYQ8 4349 aa5.16□□□□□ -1.58
PTPRF-210ENST00000463041 NACAE9PAV3 2078 aa5.16□□□□□ -1.58
PTPRF-210ENST00000463041 TRAV12-2A0A075B6T6 113 aa5.16□□□□□ -1.58
PTPRF-210ENST00000463041 A6NHS1 94 aa5.16□□□□□ -1.58
PTPRF-210ENST00000463041 CBY3A6NI87 242 aa5.16□□□□□ -1.58
PTPRF-210ENST00000463041 H3BQ15 152 aa5.16□□□□□ -1.58
PTPRF-210ENST00000463041 ZNF253O75346 499 aa5.16□□□□□ -1.58
PTPRF-210ENST00000463041 UPK1BO75841 260 aa5.16□□□□□ -1.58
PTPRF-210ENST00000463041 PRM2P04554 102 aa5.16□□□□□ -1.58
PTPRF-210ENST00000463041 IGLC2P0DOY2 106 aa5.16□□□□□ -1.58
PTPRF-210ENST00000463041 HTN3P15516 51 aa5.16□□□□□ -1.58
PTPRF-210ENST00000463041 AZU1P20160 251 aa5.16□□□□□ -1.58
PTPRF-210ENST00000463041 S100A10P60903 97 aa5.16□□□□□ -1.58
PTPRF-210ENST00000463041 CYCSP99999 105 aaKnown RBP5.16□□□□□ -1.58
PTPRF-210ENST00000463041 LGALS9BQ3B8N2 356 aa5.16□□□□□ -1.58
PTPRF-210ENST00000463041 BAP18Q8IXM2 172 aa5.16□□□□□ -1.58
PTPRF-210ENST00000463041 C15orf53Q8NAA6 179 aa5.16□□□□□ -1.58
PTPRF-210ENST00000463041 SLC25A31Q9H0C2 315 aa5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 86.7 ms