RNA–Protein interactions for RNA: ENST00000461874.1

VARS-220, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 845 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-220ENST00000461874 OXA1LQ15070 435 aa13.49□□□□□ -0.25
VARS-220ENST00000461874 PSG3Q16557 428 aa13.49□□□□□ -0.25
VARS-220ENST00000461874 LINC00305Q7Z4B0 112 aa13.49□□□□□ -0.25
VARS-220ENST00000461874 LRRC20Q8TCA0 184 aa13.49□□□□□ -0.25
VARS-220ENST00000461874 C2orf50Q96LR7 162 aa13.49□□□□□ -0.25
VARS-220ENST00000461874 C11orf1Q9H5F2 150 aa13.49□□□□□ -0.25
VARS-220ENST00000461874 INSP01308 110 aa13.48□□□□□ -0.25
VARS-220ENST00000461874 P0DMU3 169 aa13.48□□□□□ -0.25
VARS-220ENST00000461874 FAM231AP0DMU4 169 aa13.48□□□□□ -0.25
VARS-220ENST00000461874 FAM231CP0DMU5 169 aa13.48□□□□□ -0.25
VARS-220ENST00000461874 CAV2P51636 162 aa13.48□□□□□ -0.25
VARS-220ENST00000461874 LINC00299Q6ZSB3 139 aa13.48□□□□□ -0.25
VARS-220ENST00000461874 OR8A1Q8NGG7 326 aa13.48□□□□□ -0.25
VARS-220ENST00000461874 TMEM37Q8WXS4 190 aa13.48□□□□□ -0.25
VARS-220ENST00000461874 FAM210BQ96KR6 192 aa13.48□□□□□ -0.25
VARS-220ENST00000461874 FAM240BA0A1B0GVZ2 78 aa13.47□□□□□ -0.25
VARS-220ENST00000461874 COX7A2P2O60397 106 aa13.47□□□□□ -0.25
VARS-220ENST00000461874 CST7O76096 145 aa13.47□□□□□ -0.25
VARS-220ENST00000461874 CXCL2P19875 107 aa13.47□□□□□ -0.25
VARS-220ENST00000461874 HIST1H1AQ02539 215 aaPredicted RBP13.47□□□□□ -0.25
VARS-220ENST00000461874 BAP18Q8IXM2 172 aa13.47□□□□□ -0.25
VARS-220ENST00000461874 POM121L12Q8N7R1 296 aa13.47□□□□□ -0.25
VARS-220ENST00000461874 FAM24AA6NFZ4 105 aa13.46□□□□□ -0.25
VARS-220ENST00000461874 ZNF705GA8MUZ8 300 aaPredicted RBP13.46□□□□□ -0.25
VARS-220ENST00000461874 BOLA2-SMG1P6H3BVE0 249 aa13.46□□□□□ -0.25
VARS-220ENST00000461874 PRM2P04554 102 aa13.46□□□□□ -0.25
VARS-220ENST00000461874 CAMLGP49069 296 aa13.46□□□□□ -0.25
VARS-220ENST00000461874 B2MP61769 119 aa13.46□□□□□ -0.25
VARS-220ENST00000461874 IL15RAQ13261 267 aa13.46□□□□□ -0.25
VARS-220ENST00000461874 RAB31Q13636 194 aa13.46□□□□□ -0.25
VARS-220ENST00000461874 LCN15Q6UWW0 184 aa13.46□□□□□ -0.25
VARS-220ENST00000461874 RPUSD4Q96CM3 377 aaKnown RBP13.46□□□□□ -0.25
VARS-220ENST00000461874 TRAV12-2A0A075B6T6 113 aa13.45□□□□□ -0.26
VARS-220ENST00000461874 PVALBP20472 110 aaPredicted RBP13.45□□□□□ -0.26
VARS-220ENST00000461874 RHOBP62745 196 aa13.45□□□□□ -0.26
VARS-220ENST00000461874 MORN5Q5VZ52 161 aa13.45□□□□□ -0.26
VARS-220ENST00000461874 C10orf113Q5VZT2 155 aa13.45□□□□□ -0.26
VARS-220ENST00000461874 MZT2BQ6NZ67 158 aa13.45□□□□□ -0.26
VARS-220ENST00000461874 NRARPQ7Z6K4 114 aa13.45□□□□□ -0.26
VARS-220ENST00000461874 BPIFA4PQ86YQ2 179 aa13.45□□□□□ -0.26
VARS-220ENST00000461874 ZNF331Q9NQX6 463 aaPredicted RBP13.45□□□□□ -0.26
VARS-220ENST00000461874 UQCC1Q9NVA1 299 aa13.45□□□□□ -0.26
VARS-220ENST00000461874 WDR83OSQ9Y284 106 aa13.45□□□□□ -0.26
VARS-220ENST00000461874 HECTD4Q9Y4D8 3996 aa13.45□□□□□ -0.26
VARS-220ENST00000461874 SNRPCP09234 159 aaKnown RBP13.44□□□□□ -0.26
VARS-220ENST00000461874 PRB4P10163 310 aaPredicted RBP13.44□□□□□ -0.26
VARS-220ENST00000461874 S100A10P60903 97 aa13.44□□□□□ -0.26
VARS-220ENST00000461874 DAD1P61803 113 aa13.44□□□□□ -0.26
VARS-220ENST00000461874 ASAH1Q13510 395 aa13.44□□□□□ -0.26
VARS-220ENST00000461874 OPCMLQ14982 345 aa13.44□□□□□ -0.26
VARS-220ENST00000461874 VWC2Q2TAL6 325 aa13.44□□□□□ -0.26
VARS-220ENST00000461874 S100ZQ8WXG8 99 aa13.44□□□□□ -0.26
VARS-220ENST00000461874 SLC50A1Q9BRV3 221 aa13.44□□□□□ -0.26
VARS-220ENST00000461874 DNAJC4Q9NNZ3 241 aa13.44□□□□□ -0.26
VARS-220ENST00000461874 LYRM2Q9NU23 88 aaPredicted RBP13.44□□□□□ -0.26
VARS-220ENST00000461874 PPP1R14DQ9NXH3 145 aa13.44□□□□□ -0.26
VARS-220ENST00000461874 HTN3P15516 51 aa13.43□□□□□ -0.26
VARS-220ENST00000461874 TSPOP30536 169 aa13.43□□□□□ -0.26
VARS-220ENST00000461874 SULT1A1P50225 295 aa13.43□□□□□ -0.26
VARS-220ENST00000461874 RAB32Q13637 225 aa13.43□□□□□ -0.26
VARS-220ENST00000461874 MIC13Q5XKP0 118 aa13.43□□□□□ -0.26
VARS-220ENST00000461874 Q6ZRG5 221 aa13.43□□□□□ -0.26
VARS-220ENST00000461874 TMEM252Q8N6L7 170 aa13.43□□□□□ -0.26
VARS-220ENST00000461874 IGSF23A1L1A6 192 aa13.42□□□□□ -0.26
VARS-220ENST00000461874 SLC17A3O00476 420 aa13.42□□□□□ -0.26
VARS-220ENST00000461874 IGLC2P0DOY2 106 aa13.42□□□□□ -0.26
VARS-220ENST00000461874 AZU1P20160 251 aa13.42□□□□□ -0.26
VARS-220ENST00000461874 S100A11P31949 105 aa13.42□□□□□ -0.26
VARS-220ENST00000461874 TMEM256Q8N2U0 113 aa13.42□□□□□ -0.26
VARS-220ENST00000461874 LINC01587Q99440 93 aa13.42□□□□□ -0.26
VARS-220ENST00000461874 PLAC8L1A1L4L8 177 aa13.41□□□□□ -0.26
VARS-220ENST00000461874 LYRM9A8MSI8 78 aa13.41□□□□□ -0.26
VARS-220ENST00000461874 H3BQ15 152 aa13.41□□□□□ -0.26
VARS-220ENST00000461874 H3BTX0 84 aa13.41□□□□□ -0.26
VARS-220ENST00000461874 STX12Q86Y82 276 aa13.41□□□□□ -0.26
VARS-220ENST00000461874 OR1L4Q8NGR5 311 aa13.41□□□□□ -0.26
VARS-220ENST00000461874 CHAC2Q8WUX2 184 aa13.41□□□□□ -0.26
VARS-220ENST00000461874 SAT2Q96F10 170 aaPredicted RBP13.41□□□□□ -0.26
VARS-220ENST00000461874 TRAV5A0A0B4J249 113 aa13.4□□□□□ -0.26
VARS-220ENST00000461874 UBE2L5PA0A1B0GUS4 154 aa13.4□□□□□ -0.26
VARS-220ENST00000461874 CDKN1BP46527 198 aa13.4□□□□□ -0.26
VARS-220ENST00000461874 RPL29P47914 159 aaKnown RBP13.4□□□□□ -0.26
VARS-220ENST00000461874 TAS2R60P59551 318 aa13.4□□□□□ -0.26
VARS-220ENST00000461874 HBG1P69891 147 aa13.4□□□□□ -0.26
VARS-220ENST00000461874 HBG2P69892 147 aa13.4□□□□□ -0.26
VARS-220ENST00000461874 PFDN5Q99471 154 aa13.4□□□□□ -0.26
VARS-220ENST00000461874 SLC39A9Q9NUM3 307 aa13.4□□□□□ -0.26
VARS-220ENST00000461874 PXMP4Q9Y6I8 212 aa13.4□□□□□ -0.26
VARS-220ENST00000461874 PRAC2D3DTV9 90 aa13.39□□□□□ -0.27
VARS-220ENST00000461874 BAXQ07812 192 aa13.39□□□□□ -0.27
VARS-220ENST00000461874 ATP6V1FQ16864 119 aa13.39□□□□□ -0.27
VARS-220ENST00000461874 TMEM88Q6PEY1 159 aa13.39□□□□□ -0.27
VARS-220ENST00000461874 UPK1BO75841 260 aa13.38□□□□□ -0.27
VARS-220ENST00000461874 DEFB130BP0DP73 79 aa13.38□□□□□ -0.27
VARS-220ENST00000461874 DEFB130AP0DP74 79 aa13.38□□□□□ -0.27
VARS-220ENST00000461874 FCN2Q15485 313 aa13.38□□□□□ -0.27
VARS-220ENST00000461874 GUK1Q16774 197 aa13.38□□□□□ -0.27
VARS-220ENST00000461874 OR10J6PQ8NGY7 276 aa13.38□□□□□ -0.27
VARS-220ENST00000461874 ENKURQ8TC29 256 aa13.38□□□□□ -0.27
VARS-220ENST00000461874 FAT2Q9NYQ8 4349 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms