RNA–Protein interactions for RNA: ENST00000443016.1

USP6NL-203, Transcript of USP6 N-terminal like, humanhuman

TSL 2

Gene USP6NL, Length 2,491 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-203ENST00000443016 PUS1Q9Y606 427 aaKnown RBP eCLIP6.55□□□□□ -1.36
USP6NL-203ENST00000443016 DNAH7Q8WXX0 4024 aa6.55□□□□□ -1.36
USP6NL-203ENST00000443016 LOC102724200A0A096LPH7 203 aaPredicted RBP6.54□□□□□ -1.36
USP6NL-203ENST00000443016 CTSGP08311 255 aa6.54□□□□□ -1.36
USP6NL-203ENST00000443016 OR10J1P30954 320 aa6.54□□□□□ -1.36
USP6NL-203ENST00000443016 ADMP35318 185 aa6.54□□□□□ -1.36
USP6NL-203ENST00000443016 ID1P41134 155 aa6.54□□□□□ -1.36
USP6NL-203ENST00000443016 SELENOTP62341 195 aa6.54□□□□□ -1.36
USP6NL-203ENST00000443016 BAP18Q8IXM2 172 aa6.54□□□□□ -1.36
USP6NL-203ENST00000443016 THAP8Q8NA92 274 aa6.54□□□□□ -1.36
USP6NL-203ENST00000443016 WFDC1Q9HC57 220 aa6.54□□□□□ -1.36
USP6NL-203ENST00000443016 DNAJC4Q9NNZ3 241 aa6.54□□□□□ -1.36
USP6NL-203ENST00000443016 TIMM9Q9Y5J7 89 aa6.54□□□□□ -1.36
USP6NL-203ENST00000443016 F8W735 103 aaPredicted RBP6.54□□□□□ -1.36
USP6NL-203ENST00000443016 H3BS24 57 aa6.54□□□□□ -1.36
USP6NL-203ENST00000443016 TRGV9Q99603 122 aa6.54□□□□□ -1.36
USP6NL-203ENST00000443016 PSMG3Q9BT73 122 aaPredicted RBP6.54□□□□□ -1.36
USP6NL-203ENST00000443016 GGTLC1Q9BX51 225 aa6.54□□□□□ -1.36
USP6NL-203ENST00000443016 NPCDR1Q9BY65 106 aa6.54□□□□□ -1.36
USP6NL-203ENST00000443016 CYTL1Q9NRR1 136 aa6.54□□□□□ -1.36
USP6NL-203ENST00000443016 OR4C46A6NHA9 309 aa6.53□□□□□ -1.36
USP6NL-203ENST00000443016 K7EMT4 169 aa6.53□□□□□ -1.36
USP6NL-203ENST00000443016 CFDP00746 253 aaPredicted RBP6.53□□□□□ -1.36
USP6NL-203ENST00000443016 MLANAQ16655 118 aa6.53□□□□□ -1.36
USP6NL-203ENST00000443016 IL17DQ8TAD2 202 aa6.53□□□□□ -1.36
USP6NL-203ENST00000443016 PHYHIPLQ96FC7 376 aa6.53□□□□□ -1.36
USP6NL-203ENST00000443016 GINS3Q9BRX5 216 aa6.53□□□□□ -1.36
USP6NL-203ENST00000443016 ATG101Q9BSB4 218 aa6.53□□□□□ -1.36
USP6NL-203ENST00000443016 IGKV3-7A0A075B6H7 116 aa6.53□□□□□ -1.36
USP6NL-203ENST00000443016 ELOA3CA0A087WX78 387 aaPredicted RBP6.53□□□□□ -1.36
USP6NL-203ENST00000443016 IGHV3-49A0A0A0MS15 119 aa6.53□□□□□ -1.36
USP6NL-203ENST00000443016 AGPAT2O15120 278 aa6.53□□□□□ -1.36
USP6NL-203ENST00000443016 IGLC1P0CG04 106 aa6.53□□□□□ -1.36
USP6NL-203ENST00000443016 ATP6V0CP27449 155 aa6.53□□□□□ -1.36
USP6NL-203ENST00000443016 CYP2G1PQ6ZSU1 146 aa6.53□□□□□ -1.36
USP6NL-203ENST00000443016 MGST2Q99735 147 aa6.53□□□□□ -1.36
USP6NL-203ENST00000443016 RHPN1-AS1Q9BWJ2 59 aa6.53□□□□□ -1.36
USP6NL-203ENST00000443016 IGHV3OR16-13A0A075B7E8 117 aa6.52□□□□□ -1.37
USP6NL-203ENST00000443016 IGHV3-74A0A0B4J1X5 117 aa6.52□□□□□ -1.37
USP6NL-203ENST00000443016 SIVA1O15304 175 aa6.52□□□□□ -1.37
USP6NL-203ENST00000443016 RD3LP0DJH9 198 aa6.52□□□□□ -1.37
USP6NL-203ENST00000443016 S100A7P31151 101 aa6.52□□□□□ -1.37
USP6NL-203ENST00000443016 TFPI2P48307 235 aa6.52□□□□□ -1.37
USP6NL-203ENST00000443016 SERF2P84101 59 aa6.52□□□□□ -1.37
USP6NL-203ENST00000443016 PRR20EP86478 221 aa6.52□□□□□ -1.37
USP6NL-203ENST00000443016 PRR20CP86479 221 aa6.52□□□□□ -1.37
USP6NL-203ENST00000443016 PRR20DP86480 221 aa6.52□□□□□ -1.37
USP6NL-203ENST00000443016 PRR20BP86481 221 aa6.52□□□□□ -1.37
USP6NL-203ENST00000443016 PRR20AP86496 221 aa6.52□□□□□ -1.37
USP6NL-203ENST00000443016 S100A7AQ86SG5 101 aa6.52□□□□□ -1.37
USP6NL-203ENST00000443016 ARV1Q9H2C2 271 aa6.52□□□□□ -1.37
USP6NL-203ENST00000443016 MRPL36Q9P0J6 103 aaKnown RBP6.52□□□□□ -1.37
USP6NL-203ENST00000443016 SMPXQ9UHP9 88 aa6.52□□□□□ -1.37
USP6NL-203ENST00000443016 RPH3ALQ9UNE2 315 aa6.52□□□□□ -1.37
USP6NL-203ENST00000443016 TOMM40O96008 361 aa6.52□□□□□ -1.37
USP6NL-203ENST00000443016 IFNA7P01567 189 aa6.52□□□□□ -1.37
USP6NL-203ENST00000443016 SEC11BP0C7V7 166 aa6.52□□□□□ -1.37
USP6NL-203ENST00000443016 RPL29P47914 159 aaKnown RBP6.52□□□□□ -1.37
USP6NL-203ENST00000443016 APOC4P55056 127 aa6.52□□□□□ -1.37
USP6NL-203ENST00000443016 YPEL3P61236 119 aaPredicted RBP6.52□□□□□ -1.37
USP6NL-203ENST00000443016 AKR1C8PQ5T2L2 129 aa6.52□□□□□ -1.37
USP6NL-203ENST00000443016 RNASEKQ6P5S7 137 aaKnown RBP6.52□□□□□ -1.37
USP6NL-203ENST00000443016 Q6ZRG5 221 aa6.52□□□□□ -1.37
USP6NL-203ENST00000443016 OR2G3Q8NGZ4 309 aa6.52□□□□□ -1.37
USP6NL-203ENST00000443016 Q8WTZ3 238 aa6.52□□□□□ -1.37
USP6NL-203ENST00000443016 RNF2Q99496 336 aa6.52□□□□□ -1.37
USP6NL-203ENST00000443016 RSG1Q9BU20 258 aa6.52□□□□□ -1.37
USP6NL-203ENST00000443016 PXMP4Q9Y6I8 212 aa6.52□□□□□ -1.37
USP6NL-203ENST00000443016 IGHV7-4-1A0A0J9YVY3 117 aa6.51□□□□□ -1.37
USP6NL-203ENST00000443016 LINC00869P0C866 280 aa6.51□□□□□ -1.37
USP6NL-203ENST00000443016 SPP1P10451 314 aa6.51□□□□□ -1.37
USP6NL-203ENST00000443016 ACOT6Q3I5F7 207 aaPredicted RBP6.51□□□□□ -1.37
USP6NL-203ENST00000443016 TIGITQ495A1 244 aa6.51□□□□□ -1.37
USP6NL-203ENST00000443016 FFAR4Q5NUL3 377 aa6.51□□□□□ -1.37
USP6NL-203ENST00000443016 PXDC1Q5TGL8 231 aa6.51□□□□□ -1.37
USP6NL-203ENST00000443016 STPG3Q8N7X2 389 aa6.51□□□□□ -1.37
USP6NL-203ENST00000443016 PFDN5Q99471 154 aa6.51□□□□□ -1.37
USP6NL-203ENST00000443016 IGKV1OR2-108A0A075B7D4 117 aa6.51□□□□□ -1.37
USP6NL-203ENST00000443016 UMAD1C9J7I0 102 aa6.51□□□□□ -1.37
USP6NL-203ENST00000443016 CHEK1O14757 476 aa6.51□□□□□ -1.37
USP6NL-203ENST00000443016 PAFAH1B2P68402 229 aa6.51□□□□□ -1.37
USP6NL-203ENST00000443016 GBGT1Q8N5D6 347 aa6.51□□□□□ -1.37
USP6NL-203ENST00000443016 OR51G1Q8NGK1 321 aa6.51□□□□□ -1.37
USP6NL-203ENST00000443016 OR1L4Q8NGR5 311 aa6.51□□□□□ -1.37
USP6NL-203ENST00000443016 TMED6Q8WW62 240 aa6.51□□□□□ -1.37
USP6NL-203ENST00000443016 SH3BGRL3Q9H299 93 aa6.51□□□□□ -1.37
USP6NL-203ENST00000443016 SLC39A9Q9NUM3 307 aa6.51□□□□□ -1.37
USP6NL-203ENST00000443016 STARD9Q9P2P6 4700 aa6.51□□□□□ -1.37
USP6NL-203ENST00000443016 IGKV1D-37A0A075B6S9 117 aa6.5□□□□□ -1.37
USP6NL-203ENST00000443016 A0A1B0GW15 77 aa6.5□□□□□ -1.37
USP6NL-203ENST00000443016 IGKV1-17P01599 117 aa6.5□□□□□ -1.37
USP6NL-203ENST00000443016 RPL35AP18077 110 aaKnown RBP6.5□□□□□ -1.37
USP6NL-203ENST00000443016 RAB5CP51148 216 aa6.5□□□□□ -1.37
USP6NL-203ENST00000443016 ODF3L2Q3SX64 289 aa6.5□□□□□ -1.37
USP6NL-203ENST00000443016 MIC13Q5XKP0 118 aa6.5□□□□□ -1.37
USP6NL-203ENST00000443016 TOMM20LQ6UXN7 152 aa6.5□□□□□ -1.37
USP6NL-203ENST00000443016 TRAV26-1A0A087WT03 109 aa6.5□□□□□ -1.37
USP6NL-203ENST00000443016 A0A0A0MQY5 61 aa6.5□□□□□ -1.37
USP6NL-203ENST00000443016 DNASE2O00115 360 aaPredicted RBP6.5□□□□□ -1.37
USP6NL-203ENST00000443016 COX7A2P2O60397 106 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms