RNA–Protein interactions for RNA: ENST00000416778.5

CPNE1-210, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 744 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-210ENST00000416778 LSM5Q9Y4Y9 91 aaKnown RBP12.72□□□□□ -0.37
CPNE1-210ENST00000416778 M0R2Z0 102 aa12.71□□□□□ -0.37
CPNE1-210ENST00000416778 SPINK13Q1W4C9 94 aa12.71□□□□□ -0.37
CPNE1-210ENST00000416778 ZNF546Q86UE3 836 aa12.71□□□□□ -0.37
CPNE1-210ENST00000416778 ZNF738Q8NE65 137 aa12.71□□□□□ -0.37
CPNE1-210ENST00000416778 OR8A1Q8NGG7 326 aa12.71□□□□□ -0.37
CPNE1-210ENST00000416778 RNF24Q9Y225 148 aa12.71□□□□□ -0.37
CPNE1-210ENST00000416778 YTHDF2Q9Y5A9 579 aaKnown RBP12.71□□□□□ -0.37
CPNE1-210ENST00000416778 TEX48A0A1B0GUV7 120 aa12.7□□□□□ -0.38
CPNE1-210ENST00000416778 FAM240BA0A1B0GVZ2 78 aa12.7□□□□□ -0.38
CPNE1-210ENST00000416778 ZNF705GA8MUZ8 300 aaPredicted RBP12.7□□□□□ -0.38
CPNE1-210ENST00000416778 CST7O76096 145 aa12.7□□□□□ -0.38
CPNE1-210ENST00000416778 BCAP31P51572 246 aa12.7□□□□□ -0.38
CPNE1-210ENST00000416778 LRRC20Q8TCA0 184 aa12.7□□□□□ -0.38
CPNE1-210ENST00000416778 DNAJC4Q9NNZ3 241 aa12.7□□□□□ -0.38
CPNE1-210ENST00000416778 SNRPCP09234 159 aaKnown RBP12.69□□□□□ -0.38
CPNE1-210ENST00000416778 CAMLGP49069 296 aa12.69□□□□□ -0.38
CPNE1-210ENST00000416778 CAV2P51636 162 aa12.69□□□□□ -0.38
CPNE1-210ENST00000416778 MORN5Q5VZ52 161 aa12.69□□□□□ -0.38
CPNE1-210ENST00000416778 POM121L12Q8N7R1 296 aa12.69□□□□□ -0.38
CPNE1-210ENST00000416778 FAM210BQ96KR6 192 aa12.69□□□□□ -0.38
CPNE1-210ENST00000416778 TMEM208Q9BTX3 173 aa12.69□□□□□ -0.38
CPNE1-210ENST00000416778 ZNF331Q9NQX6 463 aaPredicted RBP12.69□□□□□ -0.38
CPNE1-210ENST00000416778 P0DMU3 169 aa12.68□□□□□ -0.38
CPNE1-210ENST00000416778 FAM231AP0DMU4 169 aa12.68□□□□□ -0.38
CPNE1-210ENST00000416778 FAM231CP0DMU5 169 aa12.68□□□□□ -0.38
CPNE1-210ENST00000416778 PRB4P10163 310 aaPredicted RBP12.68□□□□□ -0.38
CPNE1-210ENST00000416778 AZU1P20160 251 aa12.68□□□□□ -0.38
CPNE1-210ENST00000416778 B2MP61769 119 aa12.68□□□□□ -0.38
CPNE1-210ENST00000416778 HIST1H1AQ02539 215 aaPredicted RBP12.68□□□□□ -0.38
CPNE1-210ENST00000416778 VWC2Q2TAL6 325 aa12.68□□□□□ -0.38
CPNE1-210ENST00000416778 NRARPQ7Z6K4 114 aa12.68□□□□□ -0.38
CPNE1-210ENST00000416778 BPIFA4PQ86YQ2 179 aa12.68□□□□□ -0.38
CPNE1-210ENST00000416778 RPUSD4Q96CM3 377 aaKnown RBP12.68□□□□□ -0.38
CPNE1-210ENST00000416778 WDR83OSQ9Y284 106 aa12.68□□□□□ -0.38
CPNE1-210ENST00000416778 TRAV12-2A0A075B6T6 113 aa12.67□□□□□ -0.38
CPNE1-210ENST00000416778 COX7A2P2O60397 106 aa12.67□□□□□ -0.38
CPNE1-210ENST00000416778 INSP01308 110 aa12.67□□□□□ -0.38
CPNE1-210ENST00000416778 CXCL2P19875 107 aa12.67□□□□□ -0.38
CPNE1-210ENST00000416778 S100A11P31949 105 aa12.67□□□□□ -0.38
CPNE1-210ENST00000416778 RHOBP62745 196 aa12.67□□□□□ -0.38
CPNE1-210ENST00000416778 ASAH1Q13510 395 aa12.67□□□□□ -0.38
CPNE1-210ENST00000416778 RAB31Q13636 194 aa12.67□□□□□ -0.38
CPNE1-210ENST00000416778 RAB32Q13637 225 aa12.67□□□□□ -0.38
CPNE1-210ENST00000416778 OPCMLQ14982 345 aa12.67□□□□□ -0.38
CPNE1-210ENST00000416778 C10orf113Q5VZT2 155 aa12.67□□□□□ -0.38
CPNE1-210ENST00000416778 MIC13Q5XKP0 118 aa12.67□□□□□ -0.38
CPNE1-210ENST00000416778 MZT2BQ6NZ67 158 aa12.67□□□□□ -0.38
CPNE1-210ENST00000416778 Q6ZRG5 221 aa12.67□□□□□ -0.38
CPNE1-210ENST00000416778 BAP18Q8IXM2 172 aa12.67□□□□□ -0.38
CPNE1-210ENST00000416778 TMEM252Q8N6L7 170 aa12.67□□□□□ -0.38
CPNE1-210ENST00000416778 S100ZQ8WXG8 99 aa12.67□□□□□ -0.38
CPNE1-210ENST00000416778 SAT2Q96F10 170 aaPredicted RBP12.67□□□□□ -0.38
CPNE1-210ENST00000416778 LYRM2Q9NU23 88 aaPredicted RBP12.67□□□□□ -0.38
CPNE1-210ENST00000416778 UQCC1Q9NVA1 299 aa12.67□□□□□ -0.38
CPNE1-210ENST00000416778 DNAH2Q9P225 4427 aa12.67□□□□□ -0.38
CPNE1-210ENST00000416778 TRAV5A0A0B4J249 113 aa12.66□□□□□ -0.38
CPNE1-210ENST00000416778 H3BQ15 152 aa12.66□□□□□ -0.38
CPNE1-210ENST00000416778 BOLA2-SMG1P6H3BVE0 249 aa12.66□□□□□ -0.38
CPNE1-210ENST00000416778 IGLC2P0DOY2 106 aa12.66□□□□□ -0.38
CPNE1-210ENST00000416778 PVALBP20472 110 aaPredicted RBP12.66□□□□□ -0.38
CPNE1-210ENST00000416778 TSPOP30536 169 aa12.66□□□□□ -0.38
CPNE1-210ENST00000416778 SULT1A1P50225 295 aa12.66□□□□□ -0.38
CPNE1-210ENST00000416778 LCN15Q6UWW0 184 aa12.66□□□□□ -0.38
CPNE1-210ENST00000416778 CHAC2Q8WUX2 184 aa12.66□□□□□ -0.38
CPNE1-210ENST00000416778 DNAH17Q9UFH2 4485 aa12.65□□□□□ -0.38
CPNE1-210ENST00000416778 IGSF23A1L1A6 192 aa12.65□□□□□ -0.38
CPNE1-210ENST00000416778 PLAC8L1A1L4L8 177 aa12.65□□□□□ -0.38
CPNE1-210ENST00000416778 A6NHS1 94 aa12.65□□□□□ -0.38
CPNE1-210ENST00000416778 PRAC2D3DTV9 90 aa12.65□□□□□ -0.38
CPNE1-210ENST00000416778 RPL29P47914 159 aaKnown RBP12.65□□□□□ -0.38
CPNE1-210ENST00000416778 DAD1P61803 113 aa12.65□□□□□ -0.38
CPNE1-210ENST00000416778 LINC01587Q99440 93 aa12.65□□□□□ -0.38
CPNE1-210ENST00000416778 SLC50A1Q9BRV3 221 aa12.65□□□□□ -0.38
CPNE1-210ENST00000416778 PPP1R14DQ9NXH3 145 aa12.65□□□□□ -0.38
CPNE1-210ENST00000416778 HECTD4Q9Y4D8 3996 aa12.64□□□□□ -0.39
CPNE1-210ENST00000416778 LYRM9A8MSI8 78 aa12.64□□□□□ -0.39
CPNE1-210ENST00000416778 H3BTX0 84 aa12.64□□□□□ -0.39
CPNE1-210ENST00000416778 SLC17A3O00476 420 aa12.64□□□□□ -0.39
CPNE1-210ENST00000416778 HTN3P15516 51 aa12.64□□□□□ -0.39
CPNE1-210ENST00000416778 S100A10P60903 97 aa12.64□□□□□ -0.39
CPNE1-210ENST00000416778 IFITM3Q01628 133 aa12.64□□□□□ -0.39
CPNE1-210ENST00000416778 FCN2Q15485 313 aa12.64□□□□□ -0.39
CPNE1-210ENST00000416778 TAS2R60P59551 318 aa12.63□□□□□ -0.39
CPNE1-210ENST00000416778 ATP6V1FQ16864 119 aa12.63□□□□□ -0.39
CPNE1-210ENST00000416778 TMEM256Q8N2U0 113 aa12.63□□□□□ -0.39
CPNE1-210ENST00000416778 OR1L4Q8NGR5 311 aa12.63□□□□□ -0.39
CPNE1-210ENST00000416778 SLC39A9Q9NUM3 307 aa12.63□□□□□ -0.39
CPNE1-210ENST00000416778 FAT2Q9NYQ8 4349 aa12.63□□□□□ -0.39
CPNE1-210ENST00000416778 UPK1BO75841 260 aa12.62□□□□□ -0.39
CPNE1-210ENST00000416778 CDKN1BP46527 198 aa12.62□□□□□ -0.39
CPNE1-210ENST00000416778 KIR3DS1Q14943 382 aa12.62□□□□□ -0.39
CPNE1-210ENST00000416778 ZNF586Q9NXT0 402 aa12.62□□□□□ -0.39
CPNE1-210ENST00000416778 PXMP4Q9Y6I8 212 aa12.62□□□□□ -0.39
CPNE1-210ENST00000416778 SIX6O95475 246 aa12.61□□□□□ -0.39
CPNE1-210ENST00000416778 HBG1P69891 147 aa12.61□□□□□ -0.39
CPNE1-210ENST00000416778 HBG2P69892 147 aa12.61□□□□□ -0.39
CPNE1-210ENST00000416778 NHLH2Q02577 135 aa12.61□□□□□ -0.39
CPNE1-210ENST00000416778 GUK1Q16774 197 aa12.61□□□□□ -0.39
CPNE1-210ENST00000416778 TMEM88Q6PEY1 159 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms