RNA–Protein interactions for RNA: ENST00000407422.7

SMARCB1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-204ENST00000407422 ZNF546Q86UE3 836 aa13.75□□□□□ -0.21
SMARCB1-204ENST00000407422 CRXO43186 299 aaPredicted RBP13.75□□□□□ -0.21
SMARCB1-204ENST00000407422 CST7O76096 145 aa13.75□□□□□ -0.21
SMARCB1-204ENST00000407422 BCAP31P51572 246 aa13.75□□□□□ -0.21
SMARCB1-204ENST00000407422 CAV2P51636 162 aa13.75□□□□□ -0.21
SMARCB1-204ENST00000407422 LINC00305Q7Z4B0 112 aa13.75□□□□□ -0.21
SMARCB1-204ENST00000407422 YTHDF2Q9Y5A9 579 aaKnown RBP13.75□□□□□ -0.21
SMARCB1-204ENST00000407422 FAM240BA0A1B0GVZ2 78 aa13.74□□□□□ -0.21
SMARCB1-204ENST00000407422 FAM24AA6NFZ4 105 aa13.74□□□□□ -0.21
SMARCB1-204ENST00000407422 RRN3P1Q2M238 152 aa13.74□□□□□ -0.21
SMARCB1-204ENST00000407422 PXDC1Q5TGL8 231 aa13.74□□□□□ -0.21
SMARCB1-204ENST00000407422 S100A7AQ86SG5 101 aa13.74□□□□□ -0.21
SMARCB1-204ENST00000407422 BAP18Q8IXM2 172 aa13.74□□□□□ -0.21
SMARCB1-204ENST00000407422 TMEM37Q8WXS4 190 aa13.74□□□□□ -0.21
SMARCB1-204ENST00000407422 C2orf50Q96LR7 162 aa13.74□□□□□ -0.21
SMARCB1-204ENST00000407422 TMEM208Q9BTX3 173 aa13.74□□□□□ -0.21
SMARCB1-204ENST00000407422 PSG3Q16557 428 aa13.73□□□□□ -0.21
SMARCB1-204ENST00000407422 MORN5Q5VZ52 161 aa13.73□□□□□ -0.21
SMARCB1-204ENST00000407422 LRRC20Q8TCA0 184 aa13.73□□□□□ -0.21
SMARCB1-204ENST00000407422 NIPSNAP3BQ9BS92 247 aa13.73□□□□□ -0.21
SMARCB1-204ENST00000407422 NDUFAF3Q9BU61 184 aa13.73□□□□□ -0.21
SMARCB1-204ENST00000407422 TRAV12-2A0A075B6T6 113 aa13.72□□□□□ -0.21
SMARCB1-204ENST00000407422 HIST1H1AQ02539 215 aaPredicted RBP13.72□□□□□ -0.21
SMARCB1-204ENST00000407422 OR8A1Q8NGG7 326 aa13.72□□□□□ -0.21
SMARCB1-204ENST00000407422 FAT2Q9NYQ8 4349 aa13.72□□□□□ -0.21
SMARCB1-204ENST00000407422 ZNF705GA8MUZ8 300 aaPredicted RBP13.72□□□□□ -0.21
SMARCB1-204ENST00000407422 COX7A2P2O60397 106 aa13.72□□□□□ -0.21
SMARCB1-204ENST00000407422 INSP01308 110 aa13.72□□□□□ -0.21
SMARCB1-204ENST00000407422 CAMLGP49069 296 aa13.72□□□□□ -0.21
SMARCB1-204ENST00000407422 S100A10P60903 97 aa13.72□□□□□ -0.21
SMARCB1-204ENST00000407422 IL15RAQ13261 267 aa13.72□□□□□ -0.21
SMARCB1-204ENST00000407422 NRARPQ7Z6K4 114 aa13.72□□□□□ -0.21
SMARCB1-204ENST00000407422 TEX48A0A1B0GUV7 120 aa13.71□□□□□ -0.22
SMARCB1-204ENST00000407422 H3BTX0 84 aa13.71□□□□□ -0.22
SMARCB1-204ENST00000407422 LINC00299Q6ZSB3 139 aa13.71□□□□□ -0.22
SMARCB1-204ENST00000407422 BOLA2-SMG1P6H3BVE0 249 aa13.7□□□□□ -0.22
SMARCB1-204ENST00000407422 HTN3P15516 51 aa13.7□□□□□ -0.22
SMARCB1-204ENST00000407422 RHOBP62745 196 aa13.7□□□□□ -0.22
SMARCB1-204ENST00000407422 ASAH1Q13510 395 aa13.7□□□□□ -0.22
SMARCB1-204ENST00000407422 RAB32Q13637 225 aa13.7□□□□□ -0.22
SMARCB1-204ENST00000407422 OPCMLQ14982 345 aa13.7□□□□□ -0.22
SMARCB1-204ENST00000407422 C10orf113Q5VZT2 155 aa13.7□□□□□ -0.22
SMARCB1-204ENST00000407422 MIC13Q5XKP0 118 aa13.7□□□□□ -0.22
SMARCB1-204ENST00000407422 MZT2BQ6NZ67 158 aa13.7□□□□□ -0.22
SMARCB1-204ENST00000407422 RPUSD4Q96CM3 377 aaKnown RBP13.7□□□□□ -0.22
SMARCB1-204ENST00000407422 ZNF331Q9NQX6 463 aaPredicted RBP13.7□□□□□ -0.22
SMARCB1-204ENST00000407422 UQCC1Q9NVA1 299 aa13.7□□□□□ -0.22
SMARCB1-204ENST00000407422 RNF24Q9Y225 148 aa13.7□□□□□ -0.22
SMARCB1-204ENST00000407422 IGSF23A1L1A6 192 aa13.69□□□□□ -0.22
SMARCB1-204ENST00000407422 PVALBP20472 110 aaPredicted RBP13.69□□□□□ -0.22
SMARCB1-204ENST00000407422 BPIFA4PQ86YQ2 179 aa13.69□□□□□ -0.22
SMARCB1-204ENST00000407422 LYRM2Q9NU23 88 aaPredicted RBP13.69□□□□□ -0.22
SMARCB1-204ENST00000407422 WDR83OSQ9Y284 106 aa13.69□□□□□ -0.22
SMARCB1-204ENST00000407422 SLC17A3O00476 420 aa13.68□□□□□ -0.22
SMARCB1-204ENST00000407422 SULT1A1P50225 295 aa13.68□□□□□ -0.22
SMARCB1-204ENST00000407422 RAB31Q13636 194 aa13.68□□□□□ -0.22
SMARCB1-204ENST00000407422 VWC2Q2TAL6 325 aa13.68□□□□□ -0.22
SMARCB1-204ENST00000407422 LCN15Q6UWW0 184 aa13.68□□□□□ -0.22
SMARCB1-204ENST00000407422 TMEM252Q8N6L7 170 aa13.68□□□□□ -0.22
SMARCB1-204ENST00000407422 S100ZQ8WXG8 99 aa13.68□□□□□ -0.22
SMARCB1-204ENST00000407422 DNAJC4Q9NNZ3 241 aa13.68□□□□□ -0.22
SMARCB1-204ENST00000407422 DNAH17Q9UFH2 4485 aa13.68□□□□□ -0.22
SMARCB1-204ENST00000407422 TRAV5A0A0B4J249 113 aa13.68□□□□□ -0.22
SMARCB1-204ENST00000407422 UBE2L5PA0A1B0GUS4 154 aa13.68□□□□□ -0.22
SMARCB1-204ENST00000407422 H3BQ15 152 aa13.68□□□□□ -0.22
SMARCB1-204ENST00000407422 P0DMU3 169 aa13.68□□□□□ -0.22
SMARCB1-204ENST00000407422 FAM231AP0DMU4 169 aa13.68□□□□□ -0.22
SMARCB1-204ENST00000407422 FAM231CP0DMU5 169 aa13.68□□□□□ -0.22
SMARCB1-204ENST00000407422 IGLC2P0DOY2 106 aa13.68□□□□□ -0.22
SMARCB1-204ENST00000407422 CXCL2P19875 107 aa13.68□□□□□ -0.22
SMARCB1-204ENST00000407422 AZU1P20160 251 aa13.68□□□□□ -0.22
SMARCB1-204ENST00000407422 OXA1LQ15070 435 aa13.68□□□□□ -0.22
SMARCB1-204ENST00000407422 POM121L12Q8N7R1 296 aa13.68□□□□□ -0.22
SMARCB1-204ENST00000407422 PPP1R14DQ9NXH3 145 aa13.68□□□□□ -0.22
SMARCB1-204ENST00000407422 PRAC2D3DTV9 90 aa13.67□□□□□ -0.22
SMARCB1-204ENST00000407422 DAD1P61803 113 aa13.67□□□□□ -0.22
SMARCB1-204ENST00000407422 Q6ZRG5 221 aa13.67□□□□□ -0.22
SMARCB1-204ENST00000407422 SLC50A1Q9BRV3 221 aa13.67□□□□□ -0.22
SMARCB1-204ENST00000407422 PLAC8L1A1L4L8 177 aa13.66□□□□□ -0.22
SMARCB1-204ENST00000407422 S100A11P31949 105 aa13.66□□□□□ -0.22
SMARCB1-204ENST00000407422 Q6ZNX1 250 aa13.66□□□□□ -0.22
SMARCB1-204ENST00000407422 UPK1BO75841 260 aa13.65□□□□□ -0.22
SMARCB1-204ENST00000407422 B2MP61769 119 aa13.65□□□□□ -0.22
SMARCB1-204ENST00000407422 IFITM3Q01628 133 aa13.65□□□□□ -0.22
SMARCB1-204ENST00000407422 BAXQ07812 192 aa13.65□□□□□ -0.22
SMARCB1-204ENST00000407422 STX12Q86Y82 276 aa13.65□□□□□ -0.22
SMARCB1-204ENST00000407422 SAT2Q96F10 170 aaPredicted RBP13.65□□□□□ -0.22
SMARCB1-204ENST00000407422 FAM210BQ96KR6 192 aa13.65□□□□□ -0.22
SMARCB1-204ENST00000407422 LINC01587Q99440 93 aa13.65□□□□□ -0.22
SMARCB1-204ENST00000407422 PARD6GQ9BYG4 376 aaPredicted RBP13.65□□□□□ -0.22
SMARCB1-204ENST00000407422 SIX6O95475 246 aa13.64□□□□□ -0.23
SMARCB1-204ENST00000407422 RPL29P47914 159 aaKnown RBP13.64□□□□□ -0.23
SMARCB1-204ENST00000407422 KIR3DS1Q14943 382 aa13.64□□□□□ -0.23
SMARCB1-204ENST00000407422 FCN2Q15485 313 aa13.64□□□□□ -0.23
SMARCB1-204ENST00000407422 ENKURQ8TC29 256 aa13.64□□□□□ -0.23
SMARCB1-204ENST00000407422 SLC39A9Q9NUM3 307 aa13.64□□□□□ -0.23
SMARCB1-204ENST00000407422 HTN1P15515 57 aa13.64□□□□□ -0.23
SMARCB1-204ENST00000407422 TSPOP30536 169 aa13.64□□□□□ -0.23
SMARCB1-204ENST00000407422 CDKN1BP46527 198 aa13.64□□□□□ -0.23
SMARCB1-204ENST00000407422 HBG1P69891 147 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms