RNA–Protein interactions for RNA: ENST00000394440.7

CCT4-201, Transcript of chaperonin containing TCP1 subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCT4, Length 2,520 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT4-201ENST00000394440 SMIM12Q96EX1 92 aa11.52□□□□□ -0.56
CCT4-201ENST00000394440 OSTCQ9NRP0 149 aa11.52□□□□□ -0.56
CCT4-201ENST00000394440 U3KQE9 123 aa11.52□□□□□ -0.56
CCT4-201ENST00000394440 PSMB8P28062 276 aa11.52□□□□□ -0.57
CCT4-201ENST00000394440 FOXL1Q12952 345 aa11.52□□□□□ -0.57
CCT4-201ENST00000394440 BAGE2Q86Y30 109 aa11.52□□□□□ -0.57
CCT4-201ENST00000394440 TEX29Q8N6K0 151 aa11.52□□□□□ -0.57
CCT4-201ENST00000394440 FMC1Q96HJ9 113 aa11.52□□□□□ -0.57
CCT4-201ENST00000394440 ZNF702PQ9H963 129 aa11.52□□□□□ -0.57
CCT4-201ENST00000394440 V9GYV3 84 aa11.52□□□□□ -0.57
CCT4-201ENST00000394440 S100A9P06702 114 aaKnown RBP11.51□□□□□ -0.57
CCT4-201ENST00000394440 UBE2G1P62253 170 aa11.51□□□□□ -0.57
CCT4-201ENST00000394440 LCNL1Q6ZST4 164 aa11.51□□□□□ -0.57
CCT4-201ENST00000394440 OR8I2Q8N0Y5 310 aa11.51□□□□□ -0.57
CCT4-201ENST00000394440 MLST8Q9BVC4 326 aa11.51□□□□□ -0.57
CCT4-201ENST00000394440 RPH3ALQ9UNE2 315 aa11.51□□□□□ -0.57
CCT4-201ENST00000394440 A0A0G2JLM5 398 aa11.51□□□□□ -0.57
CCT4-201ENST00000394440 TMEM89A2RUT3 159 aa11.51□□□□□ -0.57
CCT4-201ENST00000394440 KCNIP4Q6PIL6 250 aa11.51□□□□□ -0.57
CCT4-201ENST00000394440 NHLRC2Q8NBF2 726 aa11.51□□□□□ -0.57
CCT4-201ENST00000394440 A0A1W2PPQ1 181 aa11.5□□□□□ -0.57
CCT4-201ENST00000394440 ZNF253O75346 499 aa11.5□□□□□ -0.57
CCT4-201ENST00000394440 LTAP01374 205 aa11.5□□□□□ -0.57
CCT4-201ENST00000394440 IGLV2-11P01706 119 aa11.5□□□□□ -0.57
CCT4-201ENST00000394440 ERVFC1-1P60608 527 aa11.5□□□□□ -0.57
CCT4-201ENST00000394440 IL17RELQ6ZVW7 336 aa11.5□□□□□ -0.57
CCT4-201ENST00000394440 CMTM2Q8TAZ6 248 aa11.5□□□□□ -0.57
CCT4-201ENST00000394440 GPR82Q96P67 336 aa11.5□□□□□ -0.57
CCT4-201ENST00000394440 PRSS22Q9GZN4 317 aa11.5□□□□□ -0.57
CCT4-201ENST00000394440 AKAP9Q99996 3911 aa11.5□□□□□ -0.57
CCT4-201ENST00000394440 A0A087X0K7 114 aa11.5□□□□□ -0.57
CCT4-201ENST00000394440 IGHV3-11P01762 117 aa11.5□□□□□ -0.57
CCT4-201ENST00000394440 TYMSP04818 313 aa11.5□□□□□ -0.57
CCT4-201ENST00000394440 FAM3BP58499 235 aaPredicted RBP11.5□□□□□ -0.57
CCT4-201ENST00000394440 SIGLECL1Q8N7X8 197 aa11.5□□□□□ -0.57
CCT4-201ENST00000394440 NPFFR1Q9GZQ6 430 aa11.5□□□□□ -0.57
CCT4-201ENST00000394440 RNASE7Q9H1E1 156 aaKnown RBP11.5□□□□□ -0.57
CCT4-201ENST00000394440 IL36BQ9NZH7 164 aa11.5□□□□□ -0.57
CCT4-201ENST00000394440 TRBV6-1A0A0K0K1D8 114 aa11.49□□□□□ -0.57
CCT4-201ENST00000394440 NDUFA4O00483 81 aa11.49□□□□□ -0.57
CCT4-201ENST00000394440 MGST1P10620 155 aaKnown RBP11.49□□□□□ -0.57
CCT4-201ENST00000394440 C1orf194Q5T5A4 169 aa11.49□□□□□ -0.57
CCT4-201ENST00000394440 FAM231DQ6ZW35 169 aa11.49□□□□□ -0.57
CCT4-201ENST00000394440 OR4X2Q8NGF9 303 aa11.49□□□□□ -0.57
CCT4-201ENST00000394440 SGK494Q96LW2 274 aa11.49□□□□□ -0.57
CCT4-201ENST00000394440 METTL26Q96S19 204 aa11.49□□□□□ -0.57
CCT4-201ENST00000394440 SRD5A3Q9H8P0 318 aa11.49□□□□□ -0.57
CCT4-201ENST00000394440 PHOX2AO14813 284 aa11.49□□□□□ -0.57
CCT4-201ENST00000394440 APOHP02749 345 aaPredicted RBP11.49□□□□□ -0.57
CCT4-201ENST00000394440 PSG9Q00887 426 aa11.49□□□□□ -0.57
CCT4-201ENST00000394440 IBA57Q5T440 356 aaKnown RBP11.49□□□□□ -0.57
CCT4-201ENST00000394440 C10orf99Q6UWK7 81 aa11.49□□□□□ -0.57
CCT4-201ENST00000394440 GOLT1AQ6ZVE7 132 aa11.49□□□□□ -0.57
CCT4-201ENST00000394440 Q86TA4 180 aa11.49□□□□□ -0.57
CCT4-201ENST00000394440 ZNF320A2RRD8 509 aa11.48□□□□□ -0.57
CCT4-201ENST00000394440 M0R3E3 92 aa11.48□□□□□ -0.57
CCT4-201ENST00000394440 CD5LO43866 347 aa11.48□□□□□ -0.57
CCT4-201ENST00000394440 C16orf54Q6UWD8 224 aa11.48□□□□□ -0.57
CCT4-201ENST00000394440 Q8N2B8 174 aa11.48□□□□□ -0.57
CCT4-201ENST00000394440 TRAV8-1A0A0A6YYK1 113 aa11.48□□□□□ -0.57
CCT4-201ENST00000394440 DIRC3C9JPN6 131 aa11.48□□□□□ -0.57
CCT4-201ENST00000394440 TRGC2P03986 189 aa11.48□□□□□ -0.57
CCT4-201ENST00000394440 FAM209BQ5JX69 171 aa11.48□□□□□ -0.57
CCT4-201ENST00000394440 UNQ9165/PRO28630Q6UXU0 137 aa11.48□□□□□ -0.57
CCT4-201ENST00000394440 TMEM86BQ8N661 226 aa11.48□□□□□ -0.57
CCT4-201ENST00000394440 TMEM75Q8N9X5 138 aa11.48□□□□□ -0.57
CCT4-201ENST00000394440 AAMDCQ9H7C9 122 aa11.48□□□□□ -0.57
CCT4-201ENST00000394440 SONP18583 2426 aaKnown RBP11.47□□□□□ -0.57
CCT4-201ENST00000394440 MYOZ3Q8TDC0 251 aa11.47□□□□□ -0.57
CCT4-201ENST00000394440 ZNF331Q9NQX6 463 aaPredicted RBP11.47□□□□□ -0.57
CCT4-201ENST00000394440 TRAV9-1A0A075B6T8 112 aa11.47□□□□□ -0.57
CCT4-201ENST00000394440 ZNF207O43670 478 aaKnown RBP11.47□□□□□ -0.57
CCT4-201ENST00000394440 F8P00451 2351 aa11.46□□□□□ -0.57
CCT4-201ENST00000394440 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.46□□□□□ -0.57
CCT4-201ENST00000394440 BTF3L4Q96K17 158 aa11.46□□□□□ -0.57
CCT4-201ENST00000394440 TEP1Q99973 2627 aaKnown RBP11.46□□□□□ -0.57
CCT4-201ENST00000394440 TMEM183AQ8IXX5 376 aa11.46□□□□□ -0.58
CCT4-201ENST00000394440 IGHV3OR16-13A0A075B7E8 117 aa11.45□□□□□ -0.58
CCT4-201ENST00000394440 IGHV3-74A0A0B4J1X5 117 aa11.45□□□□□ -0.58
CCT4-201ENST00000394440 IGHV3-66A0A0C4DH42 116 aa11.45□□□□□ -0.58
CCT4-201ENST00000394440 SERTM2A0A1B0GWG4 89 aa11.45□□□□□ -0.58
CCT4-201ENST00000394440 PSG3Q16557 428 aa11.45□□□□□ -0.58
CCT4-201ENST00000394440 RPEL1Q2QD12 228 aa11.45□□□□□ -0.58
CCT4-201ENST00000394440 GLMPQ8WWB7 406 aa11.45□□□□□ -0.58
CCT4-201ENST00000394440 BIN3Q9NQY0 253 aa11.45□□□□□ -0.58
CCT4-201ENST00000394440 ACANP16112 2415 aa11.45□□□□□ -0.58
CCT4-201ENST00000394440 ELANEP08246 267 aa11.45□□□□□ -0.58
CCT4-201ENST00000394440 FOXE3Q13461 319 aa11.45□□□□□ -0.58
CCT4-201ENST00000394440 Q71RC1 249 aaPredicted RBP11.45□□□□□ -0.58
CCT4-201ENST00000394440 RNF152Q8N8N0 203 aa11.45□□□□□ -0.58
CCT4-201ENST00000394440 NUDT10Q8NFP7 164 aa11.45□□□□□ -0.58
CCT4-201ENST00000394440 NUDT11Q96G61 164 aa11.45□□□□□ -0.58
CCT4-201ENST00000394440 DUX5Q96PT3 197 aa11.45□□□□□ -0.58
CCT4-201ENST00000394440 ZNF492Q9P255 531 aa11.45□□□□□ -0.58
CCT4-201ENST00000394440 PEF1Q9UBV8 284 aaKnown RBP11.45□□□□□ -0.58
CCT4-201ENST00000394440 IGHV3-49A0A0A0MS15 119 aa11.44□□□□□ -0.58
CCT4-201ENST00000394440 C19orf71A6NCJ1 209 aa11.44□□□□□ -0.58
CCT4-201ENST00000394440 C5orf52A6NGY3 159 aa11.44□□□□□ -0.58
CCT4-201ENST00000394440 K7EQM0 130 aa11.44□□□□□ -0.58
CCT4-201ENST00000394440 LINC00322Q6ZN03 302 aaPredicted RBP11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms