RNA–Protein interactions for RNA: ENST00000374680.3

RXRB-201, Transcript of retinoid X receptor beta, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RXRB, Length 2,908 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-201ENST00000374680 ZNF785A8K8V0 405 aa13.4□□□□□ -0.26
RXRB-201ENST00000374680 ARMS2P0C7Q2 107 aa13.4□□□□□ -0.26
RXRB-201ENST00000374680 PRTN3P24158 256 aa13.4□□□□□ -0.26
RXRB-201ENST00000374680 COX19Q49B96 90 aa13.4□□□□□ -0.26
RXRB-201ENST00000374680 PVRIGQ6DKI7 326 aa13.4□□□□□ -0.26
RXRB-201ENST00000374680 SHANK2-AS3Q9BTD1 123 aa13.4□□□□□ -0.26
RXRB-201ENST00000374680 USP9YO00507 2555 aaPredicted RBP13.4□□□□□ -0.26
RXRB-201ENST00000374680 IGKV2-40A0A087WW87 121 aaPredicted RBP13.4□□□□□ -0.26
RXRB-201ENST00000374680 IGKV2D-40P01614 121 aaPredicted RBP13.4□□□□□ -0.26
RXRB-201ENST00000374680 TMEM11P17152 192 aa13.4□□□□□ -0.26
RXRB-201ENST00000374680 UQCRFS1P47985 274 aa13.4□□□□□ -0.26
RXRB-201ENST00000374680 NUTF2P61970 127 aaKnown RBP13.4□□□□□ -0.26
RXRB-201ENST00000374680 Q8TAT8 98 aa13.4□□□□□ -0.26
RXRB-201ENST00000374680 CHRDL1Q9BU40 450 aa13.4□□□□□ -0.26
RXRB-201ENST00000374680 MYO18BQ8IUG5 2567 aa13.4□□□□□ -0.26
RXRB-201ENST00000374680 C19orf71A6NCJ1 209 aa13.4□□□□□ -0.27
RXRB-201ENST00000374680 PLP1P60201 277 aa13.4□□□□□ -0.27
RXRB-201ENST00000374680 OR11H6Q8NGC7 330 aa13.4□□□□□ -0.27
RXRB-201ENST00000374680 URB1-AS1Q96HZ7 61 aa13.4□□□□□ -0.27
RXRB-201ENST00000374680 PSG8Q9UQ74 426 aa13.4□□□□□ -0.27
RXRB-201ENST00000374680 CSMD2Q7Z408 3487 aa13.39□□□□□ -0.27
RXRB-201ENST00000374680 CFAP46Q8IYW2 2715 aa13.39□□□□□ -0.27
RXRB-201ENST00000374680 SERTM2A0A1B0GWG4 89 aa13.39□□□□□ -0.27
RXRB-201ENST00000374680 ZNF207O43670 478 aaKnown RBP13.39□□□□□ -0.27
RXRB-201ENST00000374680 ZNF25P17030 456 aaPredicted RBP13.39□□□□□ -0.27
RXRB-201ENST00000374680 SPATA12Q7Z6I5 190 aa13.39□□□□□ -0.27
RXRB-201ENST00000374680 PRSS22Q9GZN4 317 aa13.39□□□□□ -0.27
RXRB-201ENST00000374680 LINC01548A6NM66 108 aa13.39□□□□□ -0.27
RXRB-201ENST00000374680 SIGLEC15Q6ZMC9 328 aa13.39□□□□□ -0.27
RXRB-201ENST00000374680 Q6ZN92 141 aa13.39□□□□□ -0.27
RXRB-201ENST00000374680 RBPMS2Q6ZRY4 209 aaKnown RBP13.39□□□□□ -0.27
RXRB-201ENST00000374680 DOPEY2Q9Y3R5 2298 aa13.38□□□□□ -0.27
RXRB-201ENST00000374680 FAM181BA6NEQ2 426 aa13.38□□□□□ -0.27
RXRB-201ENST00000374680 CRIP1P50238 77 aa13.38□□□□□ -0.27
RXRB-201ENST00000374680 FXYD7P58549 80 aa13.38□□□□□ -0.27
RXRB-201ENST00000374680 FBXL19-AS1Q494R0 122 aa13.38□□□□□ -0.27
RXRB-201ENST00000374680 C21orf62Q9NYP8 219 aa13.38□□□□□ -0.27
RXRB-201ENST00000374680 SELENOKQ9Y6D0 94 aa13.38□□□□□ -0.27
RXRB-201ENST00000374680 FAM208BQ5VWN6 2430 aa13.38□□□□□ -0.27
RXRB-201ENST00000374680 A0A1B0GXF2 115 aa13.38□□□□□ -0.27
RXRB-201ENST00000374680 RAB4AP20338 218 aa13.38□□□□□ -0.27
RXRB-201ENST00000374680 MFAP4P55083 255 aa13.38□□□□□ -0.27
RXRB-201ENST00000374680 ZNF124Q15973 351 aa13.37□□□□□ -0.27
RXRB-201ENST00000374680 ZNF414Q96IQ9 312 aa13.37□□□□□ -0.27
RXRB-201ENST00000374680 LOC389332A0A1B0GUA5 103 aa13.37□□□□□ -0.27
RXRB-201ENST00000374680 H3BRN7 92 aa13.37□□□□□ -0.27
RXRB-201ENST00000374680 TCTAP57738 103 aa13.37□□□□□ -0.27
RXRB-201ENST00000374680 WIPF2Q8TF74 440 aaPredicted RBP13.37□□□□□ -0.27
RXRB-201ENST00000374680 C20orf144Q9BQM9 153 aa13.37□□□□□ -0.27
RXRB-201ENST00000374680 G3V318 75 aa13.36□□□□□ -0.27
RXRB-201ENST00000374680 GPR183P32249 361 aa13.36□□□□□ -0.27
RXRB-201ENST00000374680 C11orf71Q6IPW1 123 aa13.36□□□□□ -0.27
RXRB-201ENST00000374680 Q6ZVH6 145 aa13.36□□□□□ -0.27
RXRB-201ENST00000374680 IGLC2P0DOY2 106 aa13.36□□□□□ -0.27
RXRB-201ENST00000374680 ZNF562Q6V9R5 426 aa13.36□□□□□ -0.27
RXRB-201ENST00000374680 TMEM219Q86XT9 240 aa13.36□□□□□ -0.27
RXRB-201ENST00000374680 ACACBO00763 2458 aa13.36□□□□□ -0.27
RXRB-201ENST00000374680 BPESC1Q9GZL8 116 aa13.36□□□□□ -0.27
RXRB-201ENST00000374680 F8W735 103 aaPredicted RBP13.35□□□□□ -0.27
RXRB-201ENST00000374680 HOXB4P17483 251 aaPredicted RBP13.35□□□□□ -0.27
RXRB-201ENST00000374680 NHLH1Q02575 133 aa13.35□□□□□ -0.27
RXRB-201ENST00000374680 RNF5Q99942 180 aa13.35□□□□□ -0.27
RXRB-201ENST00000374680 IGLV11-55A0A075B6I3 123 aa13.35□□□□□ -0.27
RXRB-201ENST00000374680 UNQ5815/PRO19632Q6UWF5 114 aa13.35□□□□□ -0.27
RXRB-201ENST00000374680 TMEM75Q8N9X5 138 aa13.35□□□□□ -0.27
RXRB-201ENST00000374680 OR4B1Q8NGF8 309 aa13.35□□□□□ -0.27
RXRB-201ENST00000374680 C1RLQ9NZP8 487 aa13.35□□□□□ -0.27
RXRB-201ENST00000374680 NPIPB5A8MRT5 1133 aa13.34□□□□□ -0.27
RXRB-201ENST00000374680 ODF3BA8MYP8 253 aa13.34□□□□□ -0.27
RXRB-201ENST00000374680 C19orf84I3L1E1 186 aa13.34□□□□□ -0.27
RXRB-201ENST00000374680 AAMDCQ9H7C9 122 aa13.34□□□□□ -0.27
RXRB-201ENST00000374680 CREBBPQ92793 2442 aa13.34□□□□□ -0.27
RXRB-201ENST00000374680 TMEM213A2RRL7 107 aa13.34□□□□□ -0.27
RXRB-201ENST00000374680 NDUFA3O95167 84 aa13.34□□□□□ -0.27
RXRB-201ENST00000374680 NPBQ8NG41 125 aa13.34□□□□□ -0.27
RXRB-201ENST00000374680 NEU4Q8WWR8 484 aaPredicted RBP13.34□□□□□ -0.27
RXRB-201ENST00000374680 TMEM14CQ9P0S9 112 aa13.34□□□□□ -0.27
RXRB-201ENST00000374680 IGHV7-81A0A0B4J1V7 117 aa13.33□□□□□ -0.27
RXRB-201ENST00000374680 K7EQM0 130 aa13.33□□□□□ -0.27
RXRB-201ENST00000374680 HINT1P49773 126 aaPredicted RBP13.33□□□□□ -0.27
RXRB-201ENST00000374680 PSG3Q16557 428 aa13.33□□□□□ -0.27
RXRB-201ENST00000374680 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.33□□□□□ -0.28
RXRB-201ENST00000374680 M0R1W7 72 aa13.33□□□□□ -0.28
RXRB-201ENST00000374680 CLEC3BP05452 202 aa13.33□□□□□ -0.28
RXRB-201ENST00000374680 PPIFP30405 207 aaKnown RBP13.33□□□□□ -0.28
RXRB-201ENST00000374680 VGLL1Q99990 258 aa13.33□□□□□ -0.28
RXRB-201ENST00000374680 USP9XQ93008 2570 aaPredicted RBP13.33□□□□□ -0.28
RXRB-201ENST00000374680 hDV102S1A0JD36 115 aa13.33□□□□□ -0.28
RXRB-201ENST00000374680 CTSGP08311 255 aa13.33□□□□□ -0.28
RXRB-201ENST00000374680 CT45A10P0DMU9 189 aa13.33□□□□□ -0.28
RXRB-201ENST00000374680 BTF3P20290 206 aaKnown RBP13.33□□□□□ -0.28
RXRB-201ENST00000374680 HNRNPA3P51991 378 aaKnown RBP13.33□□□□□ -0.28
RXRB-201ENST00000374680 RASL11AQ6T310 242 aa13.33□□□□□ -0.28
RXRB-201ENST00000374680 RNF182Q8N6D2 247 aa13.33□□□□□ -0.28
RXRB-201ENST00000374680 LOC102724200A0A096LPH7 203 aaPredicted RBP13.32□□□□□ -0.28
RXRB-201ENST00000374680 IGHV1-24A0A0C4DH33 117 aa13.32□□□□□ -0.28
RXRB-201ENST00000374680 A0A1B0GUT8 65 aa13.32□□□□□ -0.28
RXRB-201ENST00000374680 LINC00614P0C842 121 aa13.32□□□□□ -0.28
RXRB-201ENST00000374680 IGLC3P0DOY3 106 aa13.32□□□□□ -0.28
RXRB-201ENST00000374680 SAA4P35542 130 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms