RNA–Protein interactions for RNA: ENST00000344627.10

SGCA-202, Transcript of sarcoglycan alpha, humanhuman

TSL 1 (best) BASIC

Gene SGCA, Length 1,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-202ENST00000344627 PRB4P10163 310 aaPredicted RBP8.87□□□□□ -0.99
SGCA-202ENST00000344627 FAM3BP58499 235 aaPredicted RBP8.87□□□□□ -0.99
SGCA-202ENST00000344627 SPINK13Q1W4C9 94 aa8.87□□□□□ -0.99
SGCA-202ENST00000344627 RNF212Q495C1 297 aa8.87□□□□□ -0.99
SGCA-202ENST00000344627 OR11H7Q8NGC8 314 aa8.87□□□□□ -0.99
SGCA-202ENST00000344627 IGF2BP2-AS1Q96M15 143 aa8.87□□□□□ -0.99
SGCA-202ENST00000344627 C17orf77Q96MU5 243 aa8.87□□□□□ -0.99
SGCA-202ENST00000344627 ARV1Q9H2C2 271 aa8.87□□□□□ -0.99
SGCA-202ENST00000344627 DKK2Q9UBU2 259 aa8.87□□□□□ -0.99
SGCA-202ENST00000344627 DNAH2Q9P225 4427 aa8.86□□□□□ -0.99
SGCA-202ENST00000344627 TRAV8-2A0A0B4J237 113 aa8.86□□□□□ -0.99
SGCA-202ENST00000344627 C7orf66A4D0T2 115 aa8.86□□□□□ -0.99
SGCA-202ENST00000344627 ZNF705GA8MUZ8 300 aaPredicted RBP8.86□□□□□ -0.99
SGCA-202ENST00000344627 FNDC10F2Z333 226 aa8.86□□□□□ -0.99
SGCA-202ENST00000344627 AGPAT2O15120 278 aa8.86□□□□□ -0.99
SGCA-202ENST00000344627 COX7A2P2O60397 106 aa8.86□□□□□ -0.99
SGCA-202ENST00000344627 INSP01308 110 aa8.86□□□□□ -0.99
SGCA-202ENST00000344627 SNRPCP09234 159 aaKnown RBP8.86□□□□□ -0.99
SGCA-202ENST00000344627 CAV2P51636 162 aa8.86□□□□□ -0.99
SGCA-202ENST00000344627 PLP1P60201 277 aa8.86□□□□□ -0.99
SGCA-202ENST00000344627 DAD1P61803 113 aa8.86□□□□□ -0.99
SGCA-202ENST00000344627 HIST1H1AQ02539 215 aaPredicted RBP8.86□□□□□ -0.99
SGCA-202ENST00000344627 ARL16Q0P5N6 197 aa8.86□□□□□ -0.99
SGCA-202ENST00000344627 RGS21Q2M5E4 152 aa8.86□□□□□ -0.99
SGCA-202ENST00000344627 ZNF546Q86UE3 836 aa8.86□□□□□ -0.99
SGCA-202ENST00000344627 UBE2DNLQ8IWF7 75 aa8.86□□□□□ -0.99
SGCA-202ENST00000344627 SEC22CQ9BRL7 303 aa8.86□□□□□ -0.99
SGCA-202ENST00000344627 NUDT15Q9NV35 164 aa8.86□□□□□ -0.99
SGCA-202ENST00000344627 RNF24Q9Y225 148 aa8.86□□□□□ -0.99
SGCA-202ENST00000344627 YTHDF2Q9Y5A9 579 aaKnown RBP8.86□□□□□ -0.99
SGCA-202ENST00000344627 FAT2Q9NYQ8 4349 aa8.85□□□□□ -0.99
SGCA-202ENST00000344627 K7EPK0 472 aa8.85□□□□□ -0.99
SGCA-202ENST00000344627 CST7O76096 145 aa8.85□□□□□ -0.99
SGCA-202ENST00000344627 H2AFB2P0C5Z0 115 aa8.85□□□□□ -0.99
SGCA-202ENST00000344627 S100A10P60903 97 aa8.85□□□□□ -0.99
SGCA-202ENST00000344627 B2MP61769 119 aa8.85□□□□□ -0.99
SGCA-202ENST00000344627 RAB31Q13636 194 aa8.85□□□□□ -0.99
SGCA-202ENST00000344627 PSG3Q16557 428 aa8.85□□□□□ -0.99
SGCA-202ENST00000344627 AMTNQ6UX39 209 aa8.85□□□□□ -0.99
SGCA-202ENST00000344627 PATE2Q6UY27 113 aa8.85□□□□□ -0.99
SGCA-202ENST00000344627 LINC00305Q7Z4B0 112 aa8.85□□□□□ -0.99
SGCA-202ENST00000344627 BAP18Q8IXM2 172 aa8.85□□□□□ -0.99
SGCA-202ENST00000344627 C12orf45Q8N5I9 185 aaPredicted RBP8.85□□□□□ -0.99
SGCA-202ENST00000344627 ZNF431Q8TF32 576 aaPredicted RBP8.85□□□□□ -0.99
SGCA-202ENST00000344627 GGACTQ9BVM4 153 aa8.85□□□□□ -0.99
SGCA-202ENST00000344627 TRAV12-2A0A075B6T6 113 aa8.84□□□□□ -0.99
SGCA-202ENST00000344627 A0A1B0GVY2 172 aa8.84□□□□□ -0.99
SGCA-202ENST00000344627 PRSS29PA6NIE9 313 aa8.84□□□□□ -0.99
SGCA-202ENST00000344627 PRM2P04554 102 aa8.84□□□□□ -0.99
SGCA-202ENST00000344627 HTN1P15515 57 aa8.84□□□□□ -0.99
SGCA-202ENST00000344627 PVALBP20472 110 aaPredicted RBP8.84□□□□□ -0.99
SGCA-202ENST00000344627 PXDC1Q5TGL8 231 aa8.84□□□□□ -0.99
SGCA-202ENST00000344627 OR8A1Q8NGG7 326 aa8.84□□□□□ -0.99
SGCA-202ENST00000344627 C2orf50Q96LR7 162 aa8.84□□□□□ -0.99
SGCA-202ENST00000344627 LINC01587Q99440 93 aa8.84□□□□□ -0.99
SGCA-202ENST00000344627 A0A087X0K7 114 aa8.83□□□□□ -1
SGCA-202ENST00000344627 FAM24AA6NFZ4 105 aa8.83□□□□□ -1
SGCA-202ENST00000344627 A8MTW9 85 aa8.83□□□□□ -1
SGCA-202ENST00000344627 H3BTX0 84 aa8.83□□□□□ -1
SGCA-202ENST00000344627 BOLA2-SMG1P6H3BVE0 249 aa8.83□□□□□ -1
SGCA-202ENST00000344627 M0R2N4 97 aa8.83□□□□□ -1
SGCA-202ENST00000344627 CXCL3P19876 107 aa8.83□□□□□ -1
SGCA-202ENST00000344627 CAMLGP49069 296 aa8.83□□□□□ -1
SGCA-202ENST00000344627 LCE2DQ5TA82 110 aaPredicted RBP8.83□□□□□ -1
SGCA-202ENST00000344627 C10orf113Q5VZT2 155 aa8.83□□□□□ -1
SGCA-202ENST00000344627 Q6ZRG5 221 aa8.83□□□□□ -1
SGCA-202ENST00000344627 NRARPQ7Z6K4 114 aa8.83□□□□□ -1
SGCA-202ENST00000344627 RPUSD4Q96CM3 377 aaKnown RBP8.83□□□□□ -1
SGCA-202ENST00000344627 MGST2Q99735 147 aa8.83□□□□□ -1
SGCA-202ENST00000344627 DNAH17Q9UFH2 4485 aa8.82□□□□□ -1
SGCA-202ENST00000344627 DEFB130BP0DP73 79 aa8.82□□□□□ -1
SGCA-202ENST00000344627 DEFB130AP0DP74 79 aa8.82□□□□□ -1
SGCA-202ENST00000344627 IFITM3Q01628 133 aa8.82□□□□□ -1
SGCA-202ENST00000344627 LCN15Q6UWW0 184 aa8.82□□□□□ -1
SGCA-202ENST00000344627 BPIFA4PQ86YQ2 179 aa8.82□□□□□ -1
SGCA-202ENST00000344627 C15orf53Q8NAA6 179 aa8.82□□□□□ -1
SGCA-202ENST00000344627 DNAJC4Q9NNZ3 241 aa8.82□□□□□ -1
SGCA-202ENST00000344627 UQCC1Q9NVA1 299 aa8.82□□□□□ -1
SGCA-202ENST00000344627 CRXO43186 299 aaPredicted RBP8.81□□□□□ -1
SGCA-202ENST00000344627 PRAF2O60831 178 aa8.81□□□□□ -1
SGCA-202ENST00000344627 BAXQ07812 192 aa8.81□□□□□ -1
SGCA-202ENST00000344627 OPCMLQ14982 345 aa8.81□□□□□ -1
SGCA-202ENST00000344627 FCN2Q15485 313 aa8.81□□□□□ -1
SGCA-202ENST00000344627 MIC13Q5XKP0 118 aa8.81□□□□□ -1
SGCA-202ENST00000344627 TMEM88Q6PEY1 159 aa8.81□□□□□ -1
SGCA-202ENST00000344627 STX12Q86Y82 276 aa8.81□□□□□ -1
SGCA-202ENST00000344627 OR1L4Q8NGR5 311 aa8.81□□□□□ -1
SGCA-202ENST00000344627 OR10J6PQ8NGY7 276 aa8.81□□□□□ -1
SGCA-202ENST00000344627 SLC50A1Q9BRV3 221 aa8.81□□□□□ -1
SGCA-202ENST00000344627 IGLV2-18A0A075B6J9 118 aa8.8□□□□□ -1
SGCA-202ENST00000344627 TRAV5A0A0B4J249 113 aa8.8□□□□□ -1
SGCA-202ENST00000344627 UBE2L5PA0A1B0GUS4 154 aa8.8□□□□□ -1
SGCA-202ENST00000344627 CXCL2P19875 107 aa8.8□□□□□ -1
SGCA-202ENST00000344627 AZU1P20160 251 aa8.8□□□□□ -1
SGCA-202ENST00000344627 S100A11P31949 105 aa8.8□□□□□ -1
SGCA-202ENST00000344627 RAB32Q13637 225 aa8.8□□□□□ -1
SGCA-202ENST00000344627 MORN5Q5VZ52 161 aa8.8□□□□□ -1
SGCA-202ENST00000344627 TMEM37Q8WXS4 190 aa8.8□□□□□ -1
SGCA-202ENST00000344627 GPN1Q9HCN4 374 aaPredicted RBP8.8□□□□□ -1
SGCA-202ENST00000344627 ZNF331Q9NQX6 463 aaPredicted RBP8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms