RNA–Protein interactions for RNA: ENST00000228916.6

SCNN1A-201, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCNN1A, Length 3,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-201ENST00000228916 THYN1Q9P016 225 aa11.07□□□□□ -0.64
SCNN1A-201ENST00000228916 HILPDAQ9Y5L2 63 aa11.07□□□□□ -0.64
SCNN1A-201ENST00000228916 TEX22C9J3V5 150 aa11.06□□□□□ -0.64
SCNN1A-201ENST00000228916 C17orf77Q96MU5 243 aa11.06□□□□□ -0.64
SCNN1A-201ENST00000228916 ASCL2Q99929 193 aa11.06□□□□□ -0.64
SCNN1A-201ENST00000228916 LOC389332A0A1B0GUA5 103 aa11.06□□□□□ -0.64
SCNN1A-201ENST00000228916 FAM104BQ5XKR9 115 aa11.06□□□□□ -0.64
SCNN1A-201ENST00000228916 LYPD1Q8N2G4 141 aa11.06□□□□□ -0.64
SCNN1A-201ENST00000228916 NUP37Q8NFH4 326 aa11.06□□□□□ -0.64
SCNN1A-201ENST00000228916 PRELID3AQ96N28 172 aa11.06□□□□□ -0.64
SCNN1A-201ENST00000228916 SCNM1Q9BWG6 230 aa11.06□□□□□ -0.64
SCNN1A-201ENST00000228916 SIGLEC9Q9Y336 463 aa11.06□□□□□ -0.64
SCNN1A-201ENST00000228916 K7EQM0 130 aa11.05□□□□□ -0.64
SCNN1A-201ENST00000228916 TNFRSF13BO14836 293 aaPredicted RBP11.05□□□□□ -0.64
SCNN1A-201ENST00000228916 CNTFRP26992 372 aa11.05□□□□□ -0.64
SCNN1A-201ENST00000228916 OR5A1Q8NGJ0 315 aa11.05□□□□□ -0.64
SCNN1A-201ENST00000228916 ABHD17AQ96GS6 310 aa11.05□□□□□ -0.64
SCNN1A-201ENST00000228916 NAA38Q9BRA0 125 aaKnown RBP11.05□□□□□ -0.64
SCNN1A-201ENST00000228916 SHANK2-AS3Q9BTD1 123 aa11.05□□□□□ -0.64
SCNN1A-201ENST00000228916 TPPP3Q9BW30 176 aa11.05□□□□□ -0.64
SCNN1A-201ENST00000228916 COL25A1Q9BXS0 654 aaPredicted RBP11.05□□□□□ -0.64
SCNN1A-201ENST00000228916 INSIG2Q9Y5U4 225 aa11.05□□□□□ -0.64
SCNN1A-201ENST00000228916 A0A1W2PPM0 123 aa11.05□□□□□ -0.64
SCNN1A-201ENST00000228916 I3L2K1 104 aa11.05□□□□□ -0.64
SCNN1A-201ENST00000228916 IGKV1-17P01599 117 aa11.05□□□□□ -0.64
SCNN1A-201ENST00000228916 HBDP02042 147 aa11.05□□□□□ -0.64
SCNN1A-201ENST00000228916 ORMDL3Q8N138 153 aa11.05□□□□□ -0.64
SCNN1A-201ENST00000228916 PPIAL4EA0A075B759 164 aa11.04□□□□□ -0.64
SCNN1A-201ENST00000228916 PPIAL4FP0DN26 164 aa11.04□□□□□ -0.64
SCNN1A-201ENST00000228916 LYPD2Q6UXB3 125 aa11.04□□□□□ -0.64
SCNN1A-201ENST00000228916 RASL11BQ9BPW5 248 aa11.04□□□□□ -0.64
SCNN1A-201ENST00000228916 TMEM133Q9H2Q1 129 aa11.04□□□□□ -0.64
SCNN1A-201ENST00000228916 JKAMPQ9P055 326 aa11.04□□□□□ -0.64
SCNN1A-201ENST00000228916 C17orf100A8MU93 164 aa11.04□□□□□ -0.64
SCNN1A-201ENST00000228916 H3BRN7 92 aa11.04□□□□□ -0.64
SCNN1A-201ENST00000228916 NDUFB3O43676 98 aa11.04□□□□□ -0.64
SCNN1A-201ENST00000228916 LOXP28300 417 aaPredicted RBP11.04□□□□□ -0.64
SCNN1A-201ENST00000228916 AMN1Q8IY45 258 aa11.04□□□□□ -0.64
SCNN1A-201ENST00000228916 ZNF414Q96IQ9 312 aa11.04□□□□□ -0.64
SCNN1A-201ENST00000228916 TMEM213A2RRL7 107 aa11.04□□□□□ -0.64
SCNN1A-201ENST00000228916 TMEM178BH3BS89 294 aa11.04□□□□□ -0.64
SCNN1A-201ENST00000228916 K7EM74 188 aa11.04□□□□□ -0.64
SCNN1A-201ENST00000228916 TMEM155Q4W5P6 130 aa11.04□□□□□ -0.64
SCNN1A-201ENST00000228916 LYZL1Q6UWQ5 148 aa11.04□□□□□ -0.64
SCNN1A-201ENST00000228916 SELENOKQ9Y6D0 94 aa11.04□□□□□ -0.64
SCNN1A-201ENST00000228916 CEP250Q9BV73 2442 aa11.03□□□□□ -0.64
SCNN1A-201ENST00000228916 SERTM2A0A1B0GWG4 89 aa11.03□□□□□ -0.64
SCNN1A-201ENST00000228916 PCP2Q8IVA1 136 aa11.03□□□□□ -0.64
SCNN1A-201ENST00000228916 IFI27L1Q96BM0 104 aa11.03□□□□□ -0.64
SCNN1A-201ENST00000228916 NPFFR1Q9GZQ6 430 aa11.03□□□□□ -0.64
SCNN1A-201ENST00000228916 CTSZQ9UBR2 303 aa11.03□□□□□ -0.64
SCNN1A-201ENST00000228916 MRPS12O15235 138 aaKnown RBP11.03□□□□□ -0.64
SCNN1A-201ENST00000228916 IGHV1-8P0DP01 117 aa11.03□□□□□ -0.64
SCNN1A-201ENST00000228916 SPCS1Q9Y6A9 102 aa11.03□□□□□ -0.64
SCNN1A-201ENST00000228916 SPAARA0A1B0GVQ0 90 aa11.02□□□□□ -0.64
SCNN1A-201ENST00000228916 RBP4P02753 201 aa11.02□□□□□ -0.64
SCNN1A-201ENST00000228916 MRPL51Q4U2R6 128 aaKnown RBP11.02□□□□□ -0.64
SCNN1A-201ENST00000228916 PPP1R27Q86WC6 154 aa11.02□□□□□ -0.64
SCNN1A-201ENST00000228916 PIFOQ8TCI5 191 aa11.02□□□□□ -0.64
SCNN1A-201ENST00000228916 RAB37Q96AX2 223 aa11.02□□□□□ -0.64
SCNN1A-201ENST00000228916 C8orf49Q96NF6 230 aa11.02□□□□□ -0.64
SCNN1A-201ENST00000228916 SMIM17P0DL12 118 aa11.02□□□□□ -0.65
SCNN1A-201ENST00000228916 CT45A10P0DMU9 189 aa11.02□□□□□ -0.65
SCNN1A-201ENST00000228916 EP300Q09472 2414 aaPredicted RBP11.02□□□□□ -0.65
SCNN1A-201ENST00000228916 THBDP07204 575 aa11.02□□□□□ -0.65
SCNN1A-201ENST00000228916 TCTAP57738 103 aa11.02□□□□□ -0.65
SCNN1A-201ENST00000228916 FXYD7P58549 80 aa11.02□□□□□ -0.65
SCNN1A-201ENST00000228916 M0R3E3 92 aa11.01□□□□□ -0.65
SCNN1A-201ENST00000228916 ADIPOQQ15848 244 aa11.01□□□□□ -0.65
SCNN1A-201ENST00000228916 C1orf185Q5T7R7 199 aa11.01□□□□□ -0.65
SCNN1A-201ENST00000228916 MALRD1Q5VYJ5 2156 aa11.01□□□□□ -0.65
SCNN1A-201ENST00000228916 TMEM189A5PLL7 270 aa11.01□□□□□ -0.65
SCNN1A-201ENST00000228916 PRSS47A8MTI9 375 aa11.01□□□□□ -0.65
SCNN1A-201ENST00000228916 NDUFS7O75251 213 aa11.01□□□□□ -0.65
SCNN1A-201ENST00000228916 CEACAM4O75871 244 aa11.01□□□□□ -0.65
SCNN1A-201ENST00000228916 PRB4P10163 310 aaPredicted RBP11.01□□□□□ -0.65
SCNN1A-201ENST00000228916 PRSS57Q6UWY2 283 aa11.01□□□□□ -0.65
SCNN1A-201ENST00000228916 DEFB124Q8NES8 71 aa11.01□□□□□ -0.65
SCNN1A-201ENST00000228916 FTH1P19P0C7X4 201 aa11□□□□□ -0.65
SCNN1A-201ENST00000228916 NMUP48645 174 aa11□□□□□ -0.65
SCNN1A-201ENST00000228916 ASCL5Q7RTU5 278 aa11□□□□□ -0.65
SCNN1A-201ENST00000228916 MAP1BP46821 2468 aaKnown RBP11□□□□□ -0.65
SCNN1A-201ENST00000228916 CNOT1A5YKK6 2376 aaKnown RBP11□□□□□ -0.65
SCNN1A-201ENST00000228916 ZNF491Q8N8L2 437 aa11□□□□□ -0.65
SCNN1A-201ENST00000228916 WI2-2373I1.2A0A1W2PRP0 233 aa11□□□□□ -0.65
SCNN1A-201ENST00000228916 K7EIM0 57 aa11□□□□□ -0.65
SCNN1A-201ENST00000228916 NPYP01303 97 aa11□□□□□ -0.65
SCNN1A-201ENST00000228916 FABP2P12104 132 aa11□□□□□ -0.65
SCNN1A-201ENST00000228916 COX8CQ7Z4L0 72 aa11□□□□□ -0.65
SCNN1A-201ENST00000228916 WFDC8Q8IUA0 241 aa11□□□□□ -0.65
SCNN1A-201ENST00000228916 PRSS33Q8NF86 280 aa11□□□□□ -0.65
SCNN1A-201ENST00000228916 CCL17Q92583 94 aa11□□□□□ -0.65
SCNN1A-201ENST00000228916 TNFRSF14Q92956 283 aa11□□□□□ -0.65
SCNN1A-201ENST00000228916 DKK2Q9UBU2 259 aa11□□□□□ -0.65
SCNN1A-201ENST00000228916 AKAP13Q12802 2813 aa11□□□□□ -0.65
SCNN1A-201ENST00000228916 PKDREJQ9NTG1 2253 aa10.99□□□□□ -0.65
SCNN1A-201ENST00000228916 CACNA1HO95180 2353 aa10.99□□□□□ -0.65
SCNN1A-201ENST00000228916 SH2D1AO60880 128 aa10.99□□□□□ -0.65
SCNN1A-201ENST00000228916 KAAG1Q9UBP8 84 aa10.99□□□□□ -0.65
SCNN1A-201ENST00000228916 CHTOPQ9Y3Y2 248 aaKnown RBP10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms