RNA–Protein interactions for RNA: ENST00000636046.1

CDKL5-210, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 5

Gene CDKL5, Length 100 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-210ENST00000636046 PRPSAP2O60256 369 aa-1.92□□□□□ -2.72
CDKL5-210ENST00000636046 FADS2O95864 444 aaKnown RBP-1.92□□□□□ -2.72
CDKL5-210ENST00000636046 APOC1P02654 83 aa-1.92□□□□□ -2.72
CDKL5-210ENST00000636046 ISG15P05161 165 aa-1.92□□□□□ -2.72
CDKL5-210ENST00000636046 GADD45AP24522 165 aa-1.92□□□□□ -2.72
CDKL5-210ENST00000636046 PRDX6P30041 224 aa-1.92□□□□□ -2.72
CDKL5-210ENST00000636046 MAN1A1P33908 653 aa-1.92□□□□□ -2.72
CDKL5-210ENST00000636046 CAPZBP47756 277 aa-1.92□□□□□ -2.72
CDKL5-210ENST00000636046 RPS24P62847 133 aaKnown RBP-1.92□□□□□ -2.72
CDKL5-210ENST00000636046 TOMM34Q15785 309 aaPredicted RBP-1.92□□□□□ -2.72
CDKL5-210ENST00000636046 AARDQ4LEZ3 155 aa-1.92□□□□□ -2.72
CDKL5-210ENST00000636046 SPANXN3Q5MJ09 141 aa-1.92□□□□□ -2.72
CDKL5-210ENST00000636046 SPOPLQ6IQ16 392 aa-1.92□□□□□ -2.72
CDKL5-210ENST00000636046 SLC35D2Q76EJ3 337 aa-1.92□□□□□ -2.72
CDKL5-210ENST00000636046 CMC1Q7Z7K0 106 aa-1.92□□□□□ -2.72
CDKL5-210ENST00000636046 COMMD7Q86VX2 200 aa-1.92□□□□□ -2.72
CDKL5-210ENST00000636046 DEFB106AQ8N104 65 aa-1.92□□□□□ -2.72
CDKL5-210ENST00000636046 SPERTQ8NA61 448 aa-1.92□□□□□ -2.72
CDKL5-210ENST00000636046 MFSD9Q8NBP5 474 aa-1.92□□□□□ -2.72
CDKL5-210ENST00000636046 MCFD2Q8NI22 146 aa-1.92□□□□□ -2.72
CDKL5-210ENST00000636046 VSTM2AQ8TAG5 236 aa-1.92□□□□□ -2.72
CDKL5-210ENST00000636046 NT5CQ8TCD5 201 aa-1.92□□□□□ -2.72
CDKL5-210ENST00000636046 DTD1Q8TEA8 209 aa-1.92□□□□□ -2.72
CDKL5-210ENST00000636046 DNAJC9Q8WXX5 260 aa-1.92□□□□□ -2.72
CDKL5-210ENST00000636046 CIDECQ96AQ7 238 aaPredicted RBP-1.92□□□□□ -2.72
CDKL5-210ENST00000636046 CCDC126Q96EE4 140 aa-1.92□□□□□ -2.72
CDKL5-210ENST00000636046 CNBD2Q96M20 576 aa-1.92□□□□□ -2.72
CDKL5-210ENST00000636046 LINC00467Q9BRT7 94 aa-1.92□□□□□ -2.72
CDKL5-210ENST00000636046 NAA11Q9BSU3 229 aaPredicted RBP-1.92□□□□□ -2.72
CDKL5-210ENST00000636046 DEFB129Q9H1M3 183 aa-1.92□□□□□ -2.72
CDKL5-210ENST00000636046 CHCHD3Q9NX63 227 aaKnown RBP-1.92□□□□□ -2.72
CDKL5-210ENST00000636046 TAS2R13Q9NYV9 303 aa-1.92□□□□□ -2.72
CDKL5-210ENST00000636046 MAD2L2Q9UI95 211 aa-1.92□□□□□ -2.72
CDKL5-210ENST00000636046 ENPP5Q9UJA9 477 aa-1.92□□□□□ -2.72
CDKL5-210ENST00000636046 UTP11Q9Y3A2 253 aaKnown RBP-1.92□□□□□ -2.72
CDKL5-210ENST00000636046 OR51B2Q9Y5P1 312 aa-1.92□□□□□ -2.72
CDKL5-210ENST00000636046 PTPRMP28827 1452 aa-1.93□□□□□ -2.72
CDKL5-210ENST00000636046 PHIPQ8WWQ0 1821 aa-1.93□□□□□ -2.72
CDKL5-210ENST00000636046 ASPMQ8IZT6 3477 aa-1.93□□□□□ -2.72
CDKL5-210ENST00000636046 C1orf232A0A0U1RR37 186 aa-1.93□□□□□ -2.72
CDKL5-210ENST00000636046 FAM183AA6NL82 134 aa-1.93□□□□□ -2.72
CDKL5-210ENST00000636046 OR2AG2A6NM03 316 aa-1.93□□□□□ -2.72
CDKL5-210ENST00000636046 HCG22E2RYF7 251 aa-1.93□□□□□ -2.72
CDKL5-210ENST00000636046 GOLGA8TH3BQL2 631 aa-1.93□□□□□ -2.72
CDKL5-210ENST00000636046 M0R381 172 aa-1.93□□□□□ -2.72
CDKL5-210ENST00000636046 CDIPTO14735 213 aa-1.93□□□□□ -2.72
CDKL5-210ENST00000636046 MRASO14807 208 aa-1.93□□□□□ -2.72
CDKL5-210ENST00000636046 VAPBO95292 243 aa-1.93□□□□□ -2.72
CDKL5-210ENST00000636046 LDOC1O95751 146 aaPredicted RBP-1.93□□□□□ -2.72
CDKL5-210ENST00000636046 HBE1P02100 147 aa-1.93□□□□□ -2.72
CDKL5-210ENST00000636046 ATP5G1P05496 136 aa-1.93□□□□□ -2.72
CDKL5-210ENST00000636046 IL11P20809 199 aa-1.93□□□□□ -2.72
CDKL5-210ENST00000636046 ANP32AP39687 249 aaKnown RBP-1.93□□□□□ -2.72
CDKL5-210ENST00000636046 TMEM33P57088 247 aa-1.93□□□□□ -2.72
CDKL5-210ENST00000636046 POLR2GP62487 172 aaKnown RBP eCLIP-1.93□□□□□ -2.72
CDKL5-210ENST00000636046 VSNL1P62760 191 aa-1.93□□□□□ -2.72
CDKL5-210ENST00000636046 UBE2BP63146 152 aa-1.93□□□□□ -2.72
CDKL5-210ENST00000636046 HIST1H3AP68431 136 aa-1.93□□□□□ -2.72
CDKL5-210ENST00000636046 RPL18AQ02543 176 aaKnown RBP-1.93□□□□□ -2.72
CDKL5-210ENST00000636046 YWHAHQ04917 246 aaPredicted RBP-1.93□□□□□ -2.72
CDKL5-210ENST00000636046 SYCP1Q15431 976 aa-1.93□□□□□ -2.72
CDKL5-210ENST00000636046 HIST2H3PS2Q5TEC6 136 aa-1.93□□□□□ -2.72
CDKL5-210ENST00000636046 C3orf33Q6P1S2 294 aa-1.93□□□□□ -2.72
CDKL5-210ENST00000636046 HIST2H3AQ71DI3 136 aa-1.93□□□□□ -2.72
CDKL5-210ENST00000636046 TUSC5Q8IXB3 177 aa-1.93□□□□□ -2.72
CDKL5-210ENST00000636046 CMTM1Q8IZ96 169 aa-1.93□□□□□ -2.72
CDKL5-210ENST00000636046 CMTM8Q8IZV2 173 aa-1.93□□□□□ -2.72
CDKL5-210ENST00000636046 VKORC1L1Q8N0U8 176 aa-1.93□□□□□ -2.72
CDKL5-210ENST00000636046 HIST3H2BBQ8N257 126 aa-1.93□□□□□ -2.72
CDKL5-210ENST00000636046 LRRC18Q8N456 261 aa-1.93□□□□□ -2.72
CDKL5-210ENST00000636046 OR7G2Q8NG99 324 aa-1.93□□□□□ -2.72
CDKL5-210ENST00000636046 OR8J2Q8NGG1 315 aa-1.93□□□□□ -2.72
CDKL5-210ENST00000636046 OR2AE1Q8NHA4 323 aa-1.93□□□□□ -2.72
CDKL5-210ENST00000636046 SVIPQ8NHG7 77 aa-1.93□□□□□ -2.72
CDKL5-210ENST00000636046 COX7B2Q8TF08 81 aa-1.93□□□□□ -2.72
CDKL5-210ENST00000636046 RASD2Q96D21 266 aa-1.93□□□□□ -2.72
CDKL5-210ENST00000636046 MS4A6EQ96DS6 147 aa-1.93□□□□□ -2.72
CDKL5-210ENST00000636046 GNPNAT1Q96EK6 184 aaPredicted RBP-1.93□□□□□ -2.72
CDKL5-210ENST00000636046 IMP4Q96G21 291 aaKnown RBP-1.93□□□□□ -2.72
CDKL5-210ENST00000636046 SCGB3A2Q96PL1 93 aa-1.93□□□□□ -2.72
CDKL5-210ENST00000636046 TREX2Q9BQ50 279 aaPredicted RBP-1.93□□□□□ -2.72
CDKL5-210ENST00000636046 WFDC6Q9BQY6 131 aa-1.93□□□□□ -2.72
CDKL5-210ENST00000636046 ANP32EQ9BTT0 268 aa-1.93□□□□□ -2.72
CDKL5-210ENST00000636046 GPR84Q9NQS5 396 aa-1.93□□□□□ -2.72
CDKL5-210ENST00000636046 TMEM216Q9P0N5 145 aa-1.93□□□□□ -2.72
CDKL5-210ENST00000636046 MARF1Q9Y4F3 1742 aaKnown RBP-1.94□□□□□ -2.72
CDKL5-210ENST00000636046 TRGV10A0A0A0MS01 117 aa-1.94□□□□□ -2.72
CDKL5-210ENST00000636046 TRBV10-1A0A0K0K1A3 114 aa-1.94□□□□□ -2.72
CDKL5-210ENST00000636046 FAM240AA0A1B0GVK7 77 aa-1.94□□□□□ -2.72
CDKL5-210ENST00000636046 TCRBV3S1A0A5B6 114 aa-1.94□□□□□ -2.72
CDKL5-210ENST00000636046 A4D1N5 150 aa-1.94□□□□□ -2.72
CDKL5-210ENST00000636046 BBIP1A8MTZ0 92 aa-1.94□□□□□ -2.72
CDKL5-210ENST00000636046 K7EP13 123 aa-1.94□□□□□ -2.72
CDKL5-210ENST00000636046 PTP4A3O75365 173 aa-1.94□□□□□ -2.72
CDKL5-210ENST00000636046 WBP4O75554 376 aaKnown RBP-1.94□□□□□ -2.72
CDKL5-210ENST00000636046 TMEM50AO95807 157 aa-1.94□□□□□ -2.72
CDKL5-210ENST00000636046 CXCL10P02778 98 aa-1.94□□□□□ -2.72
CDKL5-210ENST00000636046 MT-ATP8P03928 68 aa-1.94□□□□□ -2.72
CDKL5-210ENST00000636046 MGPP08493 103 aa-1.94□□□□□ -2.72
CDKL5-210ENST00000636046 RPS17P08708 135 aaKnown RBP-1.94□□□□□ -2.72
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms