RNA–Protein interactions for RNA: ENST00000615301.4

SHTN1-207, Transcript of shootin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SHTN1, Length 6,730 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHTN1-207ENST00000615301 ARFGEF3Q5TH69 2177 aa8.05□□□□□ -1.12
SHTN1-207ENST00000615301 SIPA1L3O60292 1781 aaPredicted RBP8.04□□□□□ -1.12
SHTN1-207ENST00000615301 OVOL1O14753 267 aa8.04□□□□□ -1.12
SHTN1-207ENST00000615301 TEX43Q6ZNM6 134 aa8.04□□□□□ -1.12
SHTN1-207ENST00000615301 IGHV1-3A0A0C4DH29 117 aa8.04□□□□□ -1.12
SHTN1-207ENST00000615301 FAM90A9PA6NNJ1 464 aa8.04□□□□□ -1.12
SHTN1-207ENST00000615301 THBDP07204 575 aa8.04□□□□□ -1.12
SHTN1-207ENST00000615301 CYYR1Q96J86 154 aa8.04□□□□□ -1.12
SHTN1-207ENST00000615301 CHD5Q8TDI0 1954 aa8.04□□□□□ -1.12
SHTN1-207ENST00000615301 LY6HO94772 140 aa8.04□□□□□ -1.12
SHTN1-207ENST00000615301 IGHV1-8P0DP01 117 aa8.04□□□□□ -1.12
SHTN1-207ENST00000615301 ZNF329Q86UD4 541 aa8.04□□□□□ -1.12
SHTN1-207ENST00000615301 HEATR1Q9H583 2144 aaKnown RBP8.04□□□□□ -1.12
SHTN1-207ENST00000615301 STRCP1A6NGW2 1772 aa8.03□□□□□ -1.12
SHTN1-207ENST00000615301 LOC102723996A0A087X1L8 192 aa8.03□□□□□ -1.12
SHTN1-207ENST00000615301 CD5LO43866 347 aa8.03□□□□□ -1.12
SHTN1-207ENST00000615301 CFHR2P36980 270 aa8.03□□□□□ -1.12
SHTN1-207ENST00000615301 UBE2E2Q96LR5 201 aa8.03□□□□□ -1.12
SHTN1-207ENST00000615301 NBASA2RRP1 2371 aa8.03□□□□□ -1.12
SHTN1-207ENST00000615301 A0A087WX48 190 aa8.03□□□□□ -1.12
SHTN1-207ENST00000615301 IGLV3-32A0A0A0MS00 114 aa8.03□□□□□ -1.12
SHTN1-207ENST00000615301 IGKV1-16P04430 117 aa8.03□□□□□ -1.12
SHTN1-207ENST00000615301 LGALS1P09382 135 aaKnown RBP8.03□□□□□ -1.12
SHTN1-207ENST00000615301 QRFPP83859 136 aa8.03□□□□□ -1.12
SHTN1-207ENST00000615301 WNK2Q9Y3S1 2297 aa8.03□□□□□ -1.12
SHTN1-207ENST00000615301 ITGB1BP1O14713 200 aa8.03□□□□□ -1.12
SHTN1-207ENST00000615301 PRSS22Q9GZN4 317 aa8.03□□□□□ -1.12
SHTN1-207ENST00000615301 INS-IGF2F8WCM5 200 aa8.03□□□□□ -1.12
SHTN1-207ENST00000615301 INSP01308 110 aa8.03□□□□□ -1.12
SHTN1-207ENST00000615301 ZNF672Q499Z4 452 aaPredicted RBP8.03□□□□□ -1.12
SHTN1-207ENST00000615301 VMO1Q7Z5L0 202 aa8.03□□□□□ -1.12
SHTN1-207ENST00000615301 DPH3P1Q9H4G8 78 aa8.03□□□□□ -1.12
SHTN1-207ENST00000615301 PLXNB2O15031 1838 aa8.03□□□□□ -1.12
SHTN1-207ENST00000615301 KNCNA6PVL3 124 aa8.03□□□□□ -1.12
SHTN1-207ENST00000615301 WNT2P09544 360 aa8.03□□□□□ -1.12
SHTN1-207ENST00000615301 CREBBPQ92793 2442 aa8.03□□□□□ -1.12
SHTN1-207ENST00000615301 PLEKHB2Q96CS7 222 aa8.03□□□□□ -1.12
SHTN1-207ENST00000615301 MRPL27Q9P0M9 148 aaKnown RBP8.03□□□□□ -1.12
SHTN1-207ENST00000615301 MRPS18CQ9Y3D5 142 aaKnown RBP8.03□□□□□ -1.12
SHTN1-207ENST00000615301 E9PLN8 166 aa8.02□□□□□ -1.13
SHTN1-207ENST00000615301 H0YJW9 148 aa8.02□□□□□ -1.13
SHTN1-207ENST00000615301 IL18BPO95998 194 aa8.02□□□□□ -1.13
SHTN1-207ENST00000615301 LINC00477Q96M19 166 aa8.02□□□□□ -1.13
SHTN1-207ENST00000615301 RPL35AP18077 110 aaKnown RBP8.02□□□□□ -1.13
SHTN1-207ENST00000615301 TSSC4Q9Y5U2 329 aaPredicted RBP8.02□□□□□ -1.13
SHTN1-207ENST00000615301 ETDBQ3ZM63 59 aa8.02□□□□□ -1.13
SHTN1-207ENST00000615301 TRGV9Q99603 122 aa8.02□□□□□ -1.13
SHTN1-207ENST00000615301 KIAA2026Q5HYC2 2103 aa8.02□□□□□ -1.13
SHTN1-207ENST00000615301 RASL11AQ6T310 242 aa8.02□□□□□ -1.13
SHTN1-207ENST00000615301 ASCL4Q6XD76 172 aa8.02□□□□□ -1.13
SHTN1-207ENST00000615301 Q86TA4 180 aa8.02□□□□□ -1.13
SHTN1-207ENST00000615301 PRIMA1Q86XR5 153 aa8.02□□□□□ -1.13
SHTN1-207ENST00000615301 C18orf32Q8TCD1 76 aa8.02□□□□□ -1.13
SHTN1-207ENST00000615301 TP53BP1Q12888 1972 aaPredicted RBP8.02□□□□□ -1.13
SHTN1-207ENST00000615301 ANKRD36A6QL64 1941 aa8.02□□□□□ -1.13
SHTN1-207ENST00000615301 DOCK4Q8N1I0 1966 aa8.01□□□□□ -1.13
SHTN1-207ENST00000615301 PKDREJQ9NTG1 2253 aa8.01□□□□□ -1.13
SHTN1-207ENST00000615301 LRRK1Q38SD2 2015 aa8.01□□□□□ -1.13
SHTN1-207ENST00000615301 C6orf226Q5I0X4 101 aa8.01□□□□□ -1.13
SHTN1-207ENST00000615301 POLR2AP24928 1970 aaKnown RBP8.01□□□□□ -1.13
SHTN1-207ENST00000615301 VCYO14598 125 aa8.01□□□□□ -1.13
SHTN1-207ENST00000615301 Q6P435 159 aa8.01□□□□□ -1.13
SHTN1-207ENST00000615301 TIMM21Q9BVV7 248 aa8.01□□□□□ -1.13
SHTN1-207ENST00000615301 RSPO3Q9BXY4 272 aaPredicted RBP8.01□□□□□ -1.13
SHTN1-207ENST00000615301 ABCA4P78363 2273 aa8.01□□□□□ -1.13
SHTN1-207ENST00000615301 SAP30O75446 220 aa8.01□□□□□ -1.13
SHTN1-207ENST00000615301 TCF15Q12870 199 aa8.01□□□□□ -1.13
SHTN1-207ENST00000615301 RNASE2P10153 161 aaKnown RBP8□□□□□ -1.13
SHTN1-207ENST00000615301 LY6DQ14210 128 aa8□□□□□ -1.13
SHTN1-207ENST00000615301 Q6ZWC4 215 aa8□□□□□ -1.13
SHTN1-207ENST00000615301 C8orf49Q96NF6 230 aa8□□□□□ -1.13
SHTN1-207ENST00000615301 SRSF8Q9BRL6 282 aaKnown RBP8□□□□□ -1.13
SHTN1-207ENST00000615301 IGKV1D-17A0A075B6S4 117 aa8□□□□□ -1.13
SHTN1-207ENST00000615301 Q6ZVH6 145 aa8□□□□□ -1.13
SHTN1-207ENST00000615301 LYPD2Q6UXB3 125 aa8□□□□□ -1.13
SHTN1-207ENST00000615301 CLPSP04118 112 aa8□□□□□ -1.13
SHTN1-207ENST00000615301 PFN1P07737 140 aaKnown RBP8□□□□□ -1.13
SHTN1-207ENST00000615301 MORN5Q5VZ52 161 aa8□□□□□ -1.13
SHTN1-207ENST00000615301 GHRHP01286 108 aa8□□□□□ -1.13
SHTN1-207ENST00000615301 RPL36AP83881 106 aaKnown RBP8□□□□□ -1.13
SHTN1-207ENST00000615301 SRSF7Q16629 238 aaKnown RBP eCLIP8□□□□□ -1.13
SHTN1-207ENST00000615301 RASL10AQ92737 203 aa8□□□□□ -1.13
SHTN1-207ENST00000615301 RPL36ALQ969Q0 106 aaKnown RBP8□□□□□ -1.13
SHTN1-207ENST00000615301 CITED1Q99966 193 aa8□□□□□ -1.13
SHTN1-207ENST00000615301 FER1L5A0AVI2 2057 aa8□□□□□ -1.13
SHTN1-207ENST00000615301 COL6A6A6NMZ7 2263 aa8□□□□□ -1.13
SHTN1-207ENST00000615301 TRAV26-2A0A0B4J265 109 aa8□□□□□ -1.13
SHTN1-207ENST00000615301 IGKV1-6A0A0C4DH72 117 aa8□□□□□ -1.13
SHTN1-207ENST00000615301 H3BUX3 64 aa8□□□□□ -1.13
SHTN1-207ENST00000615301 C9orf153Q5TBE3 101 aa8□□□□□ -1.13
SHTN1-207ENST00000615301 VGLL1Q99990 258 aa8□□□□□ -1.13
SHTN1-207ENST00000615301 DKK1O94907 266 aa7.99□□□□□ -1.13
SHTN1-207ENST00000615301 IGLV3-19P01714 112 aa7.99□□□□□ -1.13
SHTN1-207ENST00000615301 SLC25A16P16260 332 aa7.99□□□□□ -1.13
SHTN1-207ENST00000615301 CSRP2Q16527 193 aa7.99□□□□□ -1.13
SHTN1-207ENST00000615301 NEGR1Q7Z3B1 354 aa7.99□□□□□ -1.13
SHTN1-207ENST00000615301 GAFA1Q96PS6 74 aa7.99□□□□□ -1.13
SHTN1-207ENST00000615301 SIGLEC9Q9Y336 463 aa7.99□□□□□ -1.13
SHTN1-207ENST00000615301 LY96Q9Y6Y9 160 aa7.99□□□□□ -1.13
SHTN1-207ENST00000615301 TMEM178BH3BS89 294 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms