RNA–Protein interactions for RNA: ENST00000611426.4

CBWD3-207, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,381 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-207ENST00000611426 MLXQ9UH92 298 aa16.31■□□□□ 0.2
CBWD3-207ENST00000611426 IGKV1D-37A0A075B6S9 117 aa16.3■□□□□ 0.2
CBWD3-207ENST00000611426 GPR183P32249 361 aa16.3■□□□□ 0.2
CBWD3-207ENST00000611426 RND2P52198 227 aa16.3■□□□□ 0.2
CBWD3-207ENST00000611426 B2MP61769 119 aa16.3■□□□□ 0.2
CBWD3-207ENST00000611426 MIC13Q5XKP0 118 aa16.3■□□□□ 0.2
CBWD3-207ENST00000611426 TMEM61Q8N0U2 210 aa16.3■□□□□ 0.2
CBWD3-207ENST00000611426 OR10G4Q8NGN3 311 aa16.3■□□□□ 0.2
CBWD3-207ENST00000611426 OR10G9Q8NGN4 311 aa16.3■□□□□ 0.2
CBWD3-207ENST00000611426 OR10G7Q8NGN6 311 aa16.3■□□□□ 0.2
CBWD3-207ENST00000611426 SCRT1Q9BWW7 348 aa16.3■□□□□ 0.2
CBWD3-207ENST00000611426 ACTR3CQ9C0K3 210 aaPredicted RBP16.3■□□□□ 0.2
CBWD3-207ENST00000611426 MRPL36Q9P0J6 103 aaKnown RBP16.3■□□□□ 0.2
CBWD3-207ENST00000611426 OR10J1P30954 320 aa16.29■□□□□ 0.2
CBWD3-207ENST00000611426 TM4SF20Q53R12 229 aa16.29■□□□□ 0.2
CBWD3-207ENST00000611426 UNQ9165/PRO28630Q6UXU0 137 aa16.29■□□□□ 0.2
CBWD3-207ENST00000611426 ZNF502Q8TBZ5 544 aa16.29■□□□□ 0.2
CBWD3-207ENST00000611426 NPIPB3Q92617 1050 aa16.29■□□□□ 0.2
CBWD3-207ENST00000611426 ACY3Q96HD9 319 aa16.29■□□□□ 0.2
CBWD3-207ENST00000611426 CD5P06127 495 aa16.28■□□□□ 0.2
CBWD3-207ENST00000611426 CYP2G1PQ6ZSU1 146 aa16.28■□□□□ 0.2
CBWD3-207ENST00000611426 SFT2D1Q8WV19 159 aa16.28■□□□□ 0.2
CBWD3-207ENST00000611426 FAM210AQ96ND0 272 aa16.28■□□□□ 0.2
CBWD3-207ENST00000611426 SMDT1Q9H4I9 107 aa16.28■□□□□ 0.2
CBWD3-207ENST00000611426 IGHV3-35A0A0C4DH35 117 aa16.27■□□□□ 0.2
CBWD3-207ENST00000611426 FCGR2BP31994 310 aaPredicted RBP16.27■□□□□ 0.2
CBWD3-207ENST00000611426 DNAH1Q9P2D7 4330 aa16.27■□□□□ 0.2
CBWD3-207ENST00000611426 MAP1LC3B2A6NCE7 125 aa16.26■□□□□ 0.19
CBWD3-207ENST00000611426 KRBOX1C9JBD0 128 aa16.26■□□□□ 0.19
CBWD3-207ENST00000611426 RBPMS2Q6ZRY4 209 aaKnown RBP16.26■□□□□ 0.19
CBWD3-207ENST00000611426 SSX7Q7RTT5 188 aa16.26■□□□□ 0.19
CBWD3-207ENST00000611426 IL17DQ8TAD2 202 aa16.26■□□□□ 0.19
CBWD3-207ENST00000611426 VN1R17PQ8TDU5 208 aa16.26■□□□□ 0.19
CBWD3-207ENST00000611426 MAP1LC3BQ9GZQ8 125 aa16.26■□□□□ 0.19
CBWD3-207ENST00000611426 MRPL27Q9P0M9 148 aaKnown RBP16.26■□□□□ 0.19
CBWD3-207ENST00000611426 UFC1Q9Y3C8 167 aa16.26■□□□□ 0.19
CBWD3-207ENST00000611426 IGLC1P0CG04 106 aa16.26■□□□□ 0.19
CBWD3-207ENST00000611426 C8orf88P0DMB2 117 aa16.26■□□□□ 0.19
CBWD3-207ENST00000611426 CDC34P49427 236 aaPredicted RBP16.26■□□□□ 0.19
CBWD3-207ENST00000611426 RAB24Q969Q5 203 aa16.26■□□□□ 0.19
CBWD3-207ENST00000611426 PBDC1Q9BVG4 233 aa16.26■□□□□ 0.19
CBWD3-207ENST00000611426 TGOLN2O43493 480 aa16.25■□□□□ 0.19
CBWD3-207ENST00000611426 CLN5O75503 358 aa16.25■□□□□ 0.19
CBWD3-207ENST00000611426 PLP1P60201 277 aa16.25■□□□□ 0.19
CBWD3-207ENST00000611426 TOR2AQ5JU69 321 aa16.25■□□□□ 0.19
CBWD3-207ENST00000611426 BPIFCQ8NFQ6 507 aa16.25■□□□□ 0.19
CBWD3-207ENST00000611426 ATP6V0BQ99437 205 aa16.25■□□□□ 0.19
CBWD3-207ENST00000611426 RNF2Q99496 336 aa16.25■□□□□ 0.19
CBWD3-207ENST00000611426 TRAV25A0A0B4J276 109 aa16.24■□□□□ 0.19
CBWD3-207ENST00000611426 OR2T8A6NH00 312 aa16.24■□□□□ 0.19
CBWD3-207ENST00000611426 ZFP92A6NM28 416 aa16.24■□□□□ 0.19
CBWD3-207ENST00000611426 NDUFS6O75380 124 aaKnown RBP16.24■□□□□ 0.19
CBWD3-207ENST00000611426 OR5G3P0C626 314 aa16.24■□□□□ 0.19
CBWD3-207ENST00000611426 RHOBP62745 196 aa16.24■□□□□ 0.19
CBWD3-207ENST00000611426 CCL20P78556 96 aa16.24■□□□□ 0.19
CBWD3-207ENST00000611426 GCSAMLQ5JQS6 135 aa16.24■□□□□ 0.19
CBWD3-207ENST00000611426 FAM122CQ6P4D5 195 aa16.24■□□□□ 0.19
CBWD3-207ENST00000611426 GATAD1Q8WUU5 269 aa16.24■□□□□ 0.19
CBWD3-207ENST00000611426 TXN2Q99757 166 aa16.24■□□□□ 0.19
CBWD3-207ENST00000611426 SLC25A22Q9H936 323 aa16.24■□□□□ 0.19
CBWD3-207ENST00000611426 TRAV30A0A087WSZ9 112 aa16.23■□□□□ 0.19
CBWD3-207ENST00000611426 TAGLN2P37802 199 aaKnown RBP16.23■□□□□ 0.19
CBWD3-207ENST00000611426 NPBWR1P48145 328 aa16.23■□□□□ 0.19
CBWD3-207ENST00000611426 GUK1Q16774 197 aa16.23■□□□□ 0.19
CBWD3-207ENST00000611426 LCN15Q6UWW0 184 aa16.23■□□□□ 0.19
CBWD3-207ENST00000611426 IGHV3-21A0A0B4J1V1 117 aa16.22■□□□□ 0.19
CBWD3-207ENST00000611426 IGKV1-17P01599 117 aa16.22■□□□□ 0.19
CBWD3-207ENST00000611426 IGHV3-48P01763 117 aa16.22■□□□□ 0.19
CBWD3-207ENST00000611426 FABP1P07148 127 aa16.22■□□□□ 0.19
CBWD3-207ENST00000611426 STAG3L2P0CL84 134 aa16.22■□□□□ 0.19
CBWD3-207ENST00000611426 STAG3L3P0CL85 134 aa16.22■□□□□ 0.19
CBWD3-207ENST00000611426 PEA15Q15121 130 aa16.22■□□□□ 0.19
CBWD3-207ENST00000611426 ZNF506Q5JVG8 444 aa16.22■□□□□ 0.19
CBWD3-207ENST00000611426 TMEM190Q8WZ59 177 aa16.22■□□□□ 0.19
CBWD3-207ENST00000611426 MRPL32Q9BYC8 188 aaKnown RBP16.22■□□□□ 0.19
CBWD3-207ENST00000611426 C21orf62Q9NYP8 219 aa16.22■□□□□ 0.19
CBWD3-207ENST00000611426 LOC102724200A0A096LPH7 203 aaPredicted RBP16.21■□□□□ 0.19
CBWD3-207ENST00000611426 A0A1W2PPV4 95 aa16.21■□□□□ 0.19
CBWD3-207ENST00000611426 TMEM218A2RU14 115 aa16.21■□□□□ 0.19
CBWD3-207ENST00000611426 MFAP4P55083 255 aa16.21■□□□□ 0.19
CBWD3-207ENST00000611426 SRSF3P84103 164 aaKnown RBP16.21■□□□□ 0.19
CBWD3-207ENST00000611426 OR1L4Q8NGR5 311 aa16.21■□□□□ 0.19
CBWD3-207ENST00000611426 PFDN5Q99471 154 aa16.21■□□□□ 0.19
CBWD3-207ENST00000611426 ELOA3CA0A087WX78 387 aaPredicted RBP16.2■□□□□ 0.18
CBWD3-207ENST00000611426 RBFOX3A6NFN3 312 aa16.2■□□□□ 0.18
CBWD3-207ENST00000611426 F8W735 103 aaPredicted RBP16.2■□□□□ 0.18
CBWD3-207ENST00000611426 PSMB3P49720 205 aa16.2■□□□□ 0.18
CBWD3-207ENST00000611426 PPT1P50897 306 aa16.2■□□□□ 0.18
CBWD3-207ENST00000611426 YPEL3P61236 119 aaPredicted RBP16.2■□□□□ 0.18
CBWD3-207ENST00000611426 ZNF90Q03938 601 aa16.2■□□□□ 0.18
CBWD3-207ENST00000611426 C10orf91Q5T1B1 145 aa16.2■□□□□ 0.18
CBWD3-207ENST00000611426 FUT9Q9Y231 359 aa16.2■□□□□ 0.18
CBWD3-207ENST00000611426 KHDC3LQ587J8 217 aa16.19■□□□□ 0.18
CBWD3-207ENST00000611426 CHRDL1Q9BU40 450 aa16.19■□□□□ 0.18
CBWD3-207ENST00000611426 C20orf24Q9BUV8 137 aa16.19■□□□□ 0.18
CBWD3-207ENST00000611426 SEPSECSQ9HD40 501 aaKnown RBP16.19■□□□□ 0.18
CBWD3-207ENST00000611426 DNAJC4Q9NNZ3 241 aa16.19■□□□□ 0.18
CBWD3-207ENST00000611426 DAZ1Q9NQZ3 744 aaKnown RBP16.19■□□□□ 0.18
CBWD3-207ENST00000611426 LOC102723971A0A1B0GUV8 181 aa16.18■□□□□ 0.18
CBWD3-207ENST00000611426 NDUFA4O00483 81 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms