RNA–Protein interactions for RNA: ENST00000600289.6

LSM4-206, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 1,113 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-206ENST00000600289 TMEM41BQ5BJD5 291 aa11.87□□□□□ -0.51
LSM4-206ENST00000600289 PSMG4Q5JS54 123 aa11.87□□□□□ -0.51
LSM4-206ENST00000600289 TMEM217Q8N7C4 229 aa11.87□□□□□ -0.51
LSM4-206ENST00000600289 GATAD1Q8WUU5 269 aa11.87□□□□□ -0.51
LSM4-206ENST00000600289 OR5AC2Q9NZP5 309 aa11.87□□□□□ -0.51
LSM4-206ENST00000600289 H0YIZ8 118 aa11.86□□□□□ -0.51
LSM4-206ENST00000600289 ISLRO14498 428 aa11.86□□□□□ -0.51
LSM4-206ENST00000600289 PET100P0DJ07 73 aa11.86□□□□□ -0.51
LSM4-206ENST00000600289 SPP1P10451 314 aa11.86□□□□□ -0.51
LSM4-206ENST00000600289 ID1P41134 155 aa11.86□□□□□ -0.51
LSM4-206ENST00000600289 BAXQ07812 192 aa11.86□□□□□ -0.51
LSM4-206ENST00000600289 RAB31Q13636 194 aa11.86□□□□□ -0.51
LSM4-206ENST00000600289 MORN3Q6PF18 240 aaPredicted RBP11.86□□□□□ -0.51
LSM4-206ENST00000600289 PATE2Q6UY27 113 aa11.86□□□□□ -0.51
LSM4-206ENST00000600289 PPP1R1CQ8WVI7 109 aa11.86□□□□□ -0.51
LSM4-206ENST00000600289 SCRT1Q9BWW7 348 aa11.86□□□□□ -0.51
LSM4-206ENST00000600289 SLC25A31Q9H0C2 315 aa11.86□□□□□ -0.51
LSM4-206ENST00000600289 ARL6Q9H0F7 186 aa11.86□□□□□ -0.51
LSM4-206ENST00000600289 SLC25A22Q9H936 323 aa11.86□□□□□ -0.51
LSM4-206ENST00000600289 ALG5Q9Y673 324 aa11.86□□□□□ -0.51
LSM4-206ENST00000600289 MPDU1O75352 247 aa11.85□□□□□ -0.51
LSM4-206ENST00000600289 RPL7P18124 248 aaKnown RBP11.85□□□□□ -0.51
LSM4-206ENST00000600289 CAMLGP49069 296 aa11.85□□□□□ -0.51
LSM4-206ENST00000600289 PRR20EP86478 221 aa11.85□□□□□ -0.51
LSM4-206ENST00000600289 PRR20CP86479 221 aa11.85□□□□□ -0.51
LSM4-206ENST00000600289 PRR20DP86480 221 aa11.85□□□□□ -0.51
LSM4-206ENST00000600289 PRR20BP86481 221 aa11.85□□□□□ -0.51
LSM4-206ENST00000600289 PRR20AP86496 221 aa11.85□□□□□ -0.51
LSM4-206ENST00000600289 EWSR1Q01844 656 aaKnown RBP eCLIP11.85□□□□□ -0.51
LSM4-206ENST00000600289 C17orf77Q96MU5 243 aa11.85□□□□□ -0.51
LSM4-206ENST00000600289 ARV1Q9H2C2 271 aa11.85□□□□□ -0.51
LSM4-206ENST00000600289 DOK5Q9P104 306 aa11.85□□□□□ -0.51
LSM4-206ENST00000600289 ELOA3CA0A087WX78 387 aaPredicted RBP11.84□□□□□ -0.51
LSM4-206ENST00000600289 A0A087X0K7 114 aa11.84□□□□□ -0.51
LSM4-206ENST00000600289 UBE2L5PA0A1B0GUS4 154 aa11.84□□□□□ -0.51
LSM4-206ENST00000600289 MPC2O95563 127 aa11.84□□□□□ -0.51
LSM4-206ENST00000600289 OR5G3P0C626 314 aa11.84□□□□□ -0.51
LSM4-206ENST00000600289 HLA-DRB4P13762 266 aa11.84□□□□□ -0.51
LSM4-206ENST00000600289 OPCMLQ14982 345 aa11.84□□□□□ -0.51
LSM4-206ENST00000600289 LRRC37A5PQ49AS3 106 aa11.84□□□□□ -0.51
LSM4-206ENST00000600289 ACTL10Q5JWF8 245 aa11.84□□□□□ -0.51
LSM4-206ENST00000600289 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.84□□□□□ -0.51
LSM4-206ENST00000600289 CLUHP3Q96NS8 147 aa11.84□□□□□ -0.51
LSM4-206ENST00000600289 UHRF2Q96PU4 802 aa11.84□□□□□ -0.51
LSM4-206ENST00000600289 HLA-DRB4X5D2U9 266 aa11.84□□□□□ -0.51
LSM4-206ENST00000600289 ALMS1Q8TCU4 4167 aa11.83□□□□□ -0.52
LSM4-206ENST00000600289 KNCNA6PVL3 124 aa11.83□□□□□ -0.52
LSM4-206ENST00000600289 CA1P00915 261 aaPredicted RBP11.83□□□□□ -0.52
LSM4-206ENST00000600289 ATF4P18848 351 aaPredicted RBP11.83□□□□□ -0.52
LSM4-206ENST00000600289 RPL29P47914 159 aaKnown RBP11.83□□□□□ -0.52
LSM4-206ENST00000600289 NHLH2Q02577 135 aa11.83□□□□□ -0.52
LSM4-206ENST00000600289 SPATA31B1PQ5VZV4 182 aa11.83□□□□□ -0.52
LSM4-206ENST00000600289 ZFAND6Q6FIF0 208 aa11.83□□□□□ -0.52
LSM4-206ENST00000600289 IL17DQ8TAD2 202 aa11.83□□□□□ -0.52
LSM4-206ENST00000600289 RSG1Q9BU20 258 aa11.83□□□□□ -0.52
LSM4-206ENST00000600289 RNF126Q9BV68 326 aa11.83□□□□□ -0.52
LSM4-206ENST00000600289 H3BMM0 161 aa11.82□□□□□ -0.52
LSM4-206ENST00000600289 MRPS12O15235 138 aaKnown RBP11.82□□□□□ -0.52
LSM4-206ENST00000600289 COX7A2P2O60397 106 aa11.82□□□□□ -0.52
LSM4-206ENST00000600289 GIG44P09565 113 aaPredicted RBP11.82□□□□□ -0.52
LSM4-206ENST00000600289 FOXI2Q6ZQN5 318 aa11.82□□□□□ -0.52
LSM4-206ENST00000600289 Q6ZRG5 221 aa11.82□□□□□ -0.52
LSM4-206ENST00000600289 LINC00305Q7Z4B0 112 aa11.82□□□□□ -0.52
LSM4-206ENST00000600289 OR5C1Q8NGR4 320 aa11.82□□□□□ -0.52
LSM4-206ENST00000600289 TMEM37Q8WXS4 190 aa11.82□□□□□ -0.52
LSM4-206ENST00000600289 PFDN5Q99471 154 aa11.82□□□□□ -0.52
LSM4-206ENST00000600289 SAV1Q9H4B6 383 aaPredicted RBP11.82□□□□□ -0.52
LSM4-206ENST00000600289 KIAA1109Q2LD37 5005 aa11.82□□□□□ -0.52
LSM4-206ENST00000600289 C4BPBP20851 252 aa11.81□□□□□ -0.52
LSM4-206ENST00000600289 MIC13Q5XKP0 118 aa11.81□□□□□ -0.52
LSM4-206ENST00000600289 OR1L4Q8NGR5 311 aa11.81□□□□□ -0.52
LSM4-206ENST00000600289 ASB13Q8WXK3 278 aa11.81□□□□□ -0.52
LSM4-206ENST00000600289 C16orf92Q96LL3 132 aa11.81□□□□□ -0.52
LSM4-206ENST00000600289 HECTD4Q9Y4D8 3996 aa11.8□□□□□ -0.52
LSM4-206ENST00000600289 A8MTW9 85 aa11.8□□□□□ -0.52
LSM4-206ENST00000600289 CXCL2P19875 107 aa11.8□□□□□ -0.52
LSM4-206ENST00000600289 CXCL3P19876 107 aa11.8□□□□□ -0.52
LSM4-206ENST00000600289 FGF7P21781 194 aa11.8□□□□□ -0.52
LSM4-206ENST00000600289 B2MP61769 119 aa11.8□□□□□ -0.52
LSM4-206ENST00000600289 NUTF2P61970 127 aaKnown RBP11.8□□□□□ -0.52
LSM4-206ENST00000600289 RGS21Q2M5E4 152 aa11.8□□□□□ -0.52
LSM4-206ENST00000600289 C10orf113Q5VZT2 155 aa11.8□□□□□ -0.52
LSM4-206ENST00000600289 LINC00052Q96N35 136 aa11.8□□□□□ -0.52
LSM4-206ENST00000600289 NPCDR1Q9BY65 106 aa11.8□□□□□ -0.52
LSM4-206ENST00000600289 DNAJC4Q9NNZ3 241 aa11.8□□□□□ -0.52
LSM4-206ENST00000600289 RPRMQ9NS64 109 aa11.8□□□□□ -0.52
LSM4-206ENST00000600289 SLC39A9Q9NUM3 307 aa11.8□□□□□ -0.52
LSM4-206ENST00000600289 HSPB11Q9Y547 144 aa11.8□□□□□ -0.52
LSM4-206ENST00000600289 TRAV8-2A0A0B4J237 113 aa11.79□□□□□ -0.52
LSM4-206ENST00000600289 GDF5OSQ5U4N7 250 aa11.79□□□□□ -0.52
LSM4-206ENST00000600289 BPIFA4PQ86YQ2 179 aa11.79□□□□□ -0.52
LSM4-206ENST00000600289 CSNK1G2-AS1Q8NCQ2 148 aa11.79□□□□□ -0.52
LSM4-206ENST00000600289 OR11H7Q8NGC8 314 aa11.79□□□□□ -0.52
LSM4-206ENST00000600289 RARRES2Q99969 163 aa11.79□□□□□ -0.52
LSM4-206ENST00000600289 C1QTNF4Q9BXJ3 329 aa11.79□□□□□ -0.52
LSM4-206ENST00000600289 MED28Q9H204 178 aa11.79□□□□□ -0.52
LSM4-206ENST00000600289 C11orf68Q9H3H3 251 aaKnown RBP11.79□□□□□ -0.52
LSM4-206ENST00000600289 MBD2Q9UBB5 411 aa11.79□□□□□ -0.52
LSM4-206ENST00000600289 PXMP4Q9Y6I8 212 aa11.79□□□□□ -0.52
LSM4-206ENST00000600289 A0A0J9YWU9 116 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms