RNA–Protein interactions for RNA: ENST00000595523.5

SHKBP1-206, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-206ENST00000595523 ISLRO14498 428 aa8□□□□□ -1.13
SHKBP1-206ENST00000595523 MRPS12O15235 138 aaKnown RBP8□□□□□ -1.13
SHKBP1-206ENST00000595523 SSNA1O43805 119 aa8□□□□□ -1.13
SHKBP1-206ENST00000595523 SPP1P10451 314 aa8□□□□□ -1.13
SHKBP1-206ENST00000595523 GALR1P47211 349 aa8□□□□□ -1.13
SHKBP1-206ENST00000595523 RAP2BP61225 183 aa8□□□□□ -1.13
SHKBP1-206ENST00000595523 PRR20EP86478 221 aa8□□□□□ -1.13
SHKBP1-206ENST00000595523 PRR20CP86479 221 aa8□□□□□ -1.13
SHKBP1-206ENST00000595523 PRR20DP86480 221 aa8□□□□□ -1.13
SHKBP1-206ENST00000595523 PRR20BP86481 221 aa8□□□□□ -1.13
SHKBP1-206ENST00000595523 PRR20AP86496 221 aa8□□□□□ -1.13
SHKBP1-206ENST00000595523 NHLH2Q02577 135 aa8□□□□□ -1.13
SHKBP1-206ENST00000595523 LRRC37A5PQ49AS3 106 aa8□□□□□ -1.13
SHKBP1-206ENST00000595523 MORN5Q5VZ52 161 aa8□□□□□ -1.13
SHKBP1-206ENST00000595523 MORN3Q6PF18 240 aaPredicted RBP8□□□□□ -1.13
SHKBP1-206ENST00000595523 STX12Q86Y82 276 aa8□□□□□ -1.13
SHKBP1-206ENST00000595523 CSNK1G2-AS1Q8NCQ2 148 aa8□□□□□ -1.13
SHKBP1-206ENST00000595523 OR11H2Q8NH07 326 aa8□□□□□ -1.13
SHKBP1-206ENST00000595523 IL17DQ8TAD2 202 aa8□□□□□ -1.13
SHKBP1-206ENST00000595523 TMEM37Q8WXS4 190 aa8□□□□□ -1.13
SHKBP1-206ENST00000595523 LINC00052Q96N35 136 aa8□□□□□ -1.13
SHKBP1-206ENST00000595523 GPR82Q96P67 336 aa8□□□□□ -1.13
SHKBP1-206ENST00000595523 ARV1Q9H2C2 271 aa8□□□□□ -1.13
SHKBP1-206ENST00000595523 SAV1Q9H4B6 383 aaPredicted RBP8□□□□□ -1.13
SHKBP1-206ENST00000595523 UQCC1Q9NVA1 299 aa8□□□□□ -1.13
SHKBP1-206ENST00000595523 HYDINQ4G0P3 5121 aa8□□□□□ -1.13
SHKBP1-206ENST00000595523 DNAH1Q9P2D7 4330 aa8□□□□□ -1.13
SHKBP1-206ENST00000595523 ALMS1Q8TCU4 4167 aa8□□□□□ -1.13
SHKBP1-206ENST00000595523 E5RGE8 158 aa7.99□□□□□ -1.13
SHKBP1-206ENST00000595523 F6UB75 175 aa7.99□□□□□ -1.13
SHKBP1-206ENST00000595523 PTTG1O95997 202 aa7.99□□□□□ -1.13
SHKBP1-206ENST00000595523 S100A11P31949 105 aa7.99□□□□□ -1.13
SHKBP1-206ENST00000595523 ID1P41134 155 aa7.99□□□□□ -1.13
SHKBP1-206ENST00000595523 CAMLGP49069 296 aa7.99□□□□□ -1.13
SHKBP1-206ENST00000595523 MEOX2P50222 304 aa7.99□□□□□ -1.13
SHKBP1-206ENST00000595523 PXDC1Q5TGL8 231 aa7.99□□□□□ -1.13
SHKBP1-206ENST00000595523 MIC13Q5XKP0 118 aa7.99□□□□□ -1.13
SHKBP1-206ENST00000595523 PPP1R1CQ8WVI7 109 aa7.99□□□□□ -1.13
SHKBP1-206ENST00000595523 RARRES2Q99969 163 aa7.99□□□□□ -1.13
SHKBP1-206ENST00000595523 RNF126Q9BV68 326 aa7.99□□□□□ -1.13
SHKBP1-206ENST00000595523 CLEC5AQ9NY25 188 aa7.99□□□□□ -1.13
SHKBP1-206ENST00000595523 ALG5Q9Y673 324 aa7.99□□□□□ -1.13
SHKBP1-206ENST00000595523 A0A087X0K7 114 aa7.98□□□□□ -1.13
SHKBP1-206ENST00000595523 RPL7P18124 248 aaKnown RBP7.98□□□□□ -1.13
SHKBP1-206ENST00000595523 HBG1P69891 147 aa7.98□□□□□ -1.13
SHKBP1-206ENST00000595523 HBG2P69892 147 aa7.98□□□□□ -1.13
SHKBP1-206ENST00000595523 CYCSP99999 105 aaKnown RBP7.98□□□□□ -1.13
SHKBP1-206ENST00000595523 OPCMLQ14982 345 aa7.98□□□□□ -1.13
SHKBP1-206ENST00000595523 IGFL4Q6B9Z1 124 aa7.98□□□□□ -1.13
SHKBP1-206ENST00000595523 FOXI2Q6ZQN5 318 aa7.98□□□□□ -1.13
SHKBP1-206ENST00000595523 LINC00305Q7Z4B0 112 aa7.98□□□□□ -1.13
SHKBP1-206ENST00000595523 ZNF709Q8N972 641 aa7.98□□□□□ -1.13
SHKBP1-206ENST00000595523 Q8NAQ8 132 aa7.98□□□□□ -1.13
SHKBP1-206ENST00000595523 CHAC2Q8WUX2 184 aa7.98□□□□□ -1.13
SHKBP1-206ENST00000595523 C16orf92Q96LL3 132 aa7.98□□□□□ -1.13
SHKBP1-206ENST00000595523 X6R8D5 127 aa7.98□□□□□ -1.13
SHKBP1-206ENST00000595523 A0A0J9YX75 114 aa7.97□□□□□ -1.13
SHKBP1-206ENST00000595523 ZNF705EA8MWA4 302 aaPredicted RBP7.97□□□□□ -1.13
SHKBP1-206ENST00000595523 DEFB4AO15263 64 aa7.97□□□□□ -1.13
SHKBP1-206ENST00000595523 COX7A2P2O60397 106 aa7.97□□□□□ -1.13
SHKBP1-206ENST00000595523 MPC2O95563 127 aa7.97□□□□□ -1.13
SHKBP1-206ENST00000595523 IGKV3-20P01619 116 aa7.97□□□□□ -1.13
SHKBP1-206ENST00000595523 RLN2P04090 185 aa7.97□□□□□ -1.13
SHKBP1-206ENST00000595523 ATF4P18848 351 aaPredicted RBP7.97□□□□□ -1.13
SHKBP1-206ENST00000595523 CXCL3P19876 107 aa7.97□□□□□ -1.13
SHKBP1-206ENST00000595523 S100A7P31151 101 aa7.97□□□□□ -1.13
SHKBP1-206ENST00000595523 RPL29P47914 159 aaKnown RBP7.97□□□□□ -1.13
SHKBP1-206ENST00000595523 BAXQ07812 192 aa7.97□□□□□ -1.13
SHKBP1-206ENST00000595523 ATP6V1FQ16864 119 aa7.97□□□□□ -1.13
SHKBP1-206ENST00000595523 TMEM41BQ5BJD5 291 aa7.97□□□□□ -1.13
SHKBP1-206ENST00000595523 SAMD13Q5VXD3 122 aa7.97□□□□□ -1.13
SHKBP1-206ENST00000595523 RNF182Q8N6D2 247 aa7.97□□□□□ -1.13
SHKBP1-206ENST00000595523 OR5C1Q8NGR4 320 aa7.97□□□□□ -1.13
SHKBP1-206ENST00000595523 CLUHP3Q96NS8 147 aa7.97□□□□□ -1.13
SHKBP1-206ENST00000595523 C11orf68Q9H3H3 251 aaKnown RBP7.97□□□□□ -1.13
SHKBP1-206ENST00000595523 XCL2Q9UBD3 114 aa7.97□□□□□ -1.13
SHKBP1-206ENST00000595523 ELOA3CA0A087WX78 387 aaPredicted RBP7.96□□□□□ -1.14
SHKBP1-206ENST00000595523 A8MTW9 85 aa7.96□□□□□ -1.14
SHKBP1-206ENST00000595523 SNRPCP09234 159 aaKnown RBP7.96□□□□□ -1.14
SHKBP1-206ENST00000595523 RBMY1A1P0DJD3 496 aaKnown RBP7.96□□□□□ -1.14
SHKBP1-206ENST00000595523 RBMY1CP0DJD4 496 aa7.96□□□□□ -1.14
SHKBP1-206ENST00000595523 FGF7P21781 194 aa7.96□□□□□ -1.14
SHKBP1-206ENST00000595523 HLA-DMBP28068 263 aa7.96□□□□□ -1.14
SHKBP1-206ENST00000595523 FGL1Q08830 312 aa7.96□□□□□ -1.14
SHKBP1-206ENST00000595523 RAB31Q13636 194 aa7.96□□□□□ -1.14
SHKBP1-206ENST00000595523 CLINT1Q14677 625 aa7.96□□□□□ -1.14
SHKBP1-206ENST00000595523 RBMY1FQ15415 496 aaKnown RBP7.96□□□□□ -1.14
SHKBP1-206ENST00000595523 FAM78BQ5VT40 261 aa7.96□□□□□ -1.14
SHKBP1-206ENST00000595523 C10orf113Q5VZT2 155 aa7.96□□□□□ -1.14
SHKBP1-206ENST00000595523 AMTNQ6UX39 209 aa7.96□□□□□ -1.14
SHKBP1-206ENST00000595523 THAP6Q8TBB0 222 aa7.96□□□□□ -1.14
SHKBP1-206ENST00000595523 NPCDR1Q9BY65 106 aa7.96□□□□□ -1.14
SHKBP1-206ENST00000595523 SLC25A31Q9H0C2 315 aa7.96□□□□□ -1.14
SHKBP1-206ENST00000595523 SLC35B3Q9H1N7 401 aa7.96□□□□□ -1.14
SHKBP1-206ENST00000595523 RPRMQ9NS64 109 aa7.96□□□□□ -1.14
SHKBP1-206ENST00000595523 SLC39A9Q9NUM3 307 aa7.96□□□□□ -1.14
SHKBP1-206ENST00000595523 PXMP4Q9Y6I8 212 aa7.96□□□□□ -1.14
SHKBP1-206ENST00000595523 TRAV5A0A0B4J249 113 aa7.95□□□□□ -1.14
SHKBP1-206ENST00000595523 IGHV4-28A0A0C4DH34 117 aa7.95□□□□□ -1.14
SHKBP1-206ENST00000595523 SLC17A3O00476 420 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms