RNA–Protein interactions for RNA: ENST00000556374.5

ATXN3-241, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,083 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-241ENST00000556374 FAM222BQ8WU58 562 aa3.53□□□□□ -1.84
ATXN3-241ENST00000556374 RND1Q92730 232 aa3.53□□□□□ -1.84
ATXN3-241ENST00000556374 TMEM186Q96B77 213 aa3.53□□□□□ -1.84
ATXN3-241ENST00000556374 GRAMD2BQ96HH9 432 aa3.53□□□□□ -1.84
ATXN3-241ENST00000556374 RBM14Q96PK6 669 aaKnown RBP3.53□□□□□ -1.84
ATXN3-241ENST00000556374 GAFA1Q96PS6 74 aa3.53□□□□□ -1.84
ATXN3-241ENST00000556374 CCL13Q99616 98 aa3.53□□□□□ -1.84
ATXN3-241ENST00000556374 MRPL20Q9BYC9 149 aaKnown RBP3.53□□□□□ -1.84
ATXN3-241ENST00000556374 RNASE7Q9H1E1 156 aaKnown RBP3.53□□□□□ -1.84
ATXN3-241ENST00000556374 SEPSECSQ9HD40 501 aaKnown RBP3.53□□□□□ -1.84
ATXN3-241ENST00000556374 DYNLRB1Q9NP97 96 aa3.53□□□□□ -1.84
ATXN3-241ENST00000556374 MRPL27Q9P0M9 148 aaKnown RBP3.53□□□□□ -1.84
ATXN3-241ENST00000556374 RPH3ALQ9UNE2 315 aa3.53□□□□□ -1.84
ATXN3-241ENST00000556374 WASHC3Q9Y3C0 194 aa3.53□□□□□ -1.84
ATXN3-241ENST00000556374 TBL2Q9Y4P3 447 aaKnown RBP3.53□□□□□ -1.84
ATXN3-241ENST00000556374 AMMECR1Q9Y4X0 333 aaPredicted RBP3.53□□□□□ -1.84
ATXN3-241ENST00000556374 SOX21Q9Y651 276 aaPredicted RBP3.53□□□□□ -1.84
ATXN3-241ENST00000556374 V9GYV3 84 aa3.53□□□□□ -1.84
ATXN3-241ENST00000556374 RAI1Q7Z5J4 1906 aaPredicted RBP3.52□□□□□ -1.85
ATXN3-241ENST00000556374 PPIAL4EA0A075B759 164 aa3.52□□□□□ -1.85
ATXN3-241ENST00000556374 IGLV5-39A0A0G2JS06 123 aa3.52□□□□□ -1.85
ATXN3-241ENST00000556374 TEX50A0A1B0GTY4 177 aa3.52□□□□□ -1.85
ATXN3-241ENST00000556374 SMIM27A0A1W2PRY6 76 aa3.52□□□□□ -1.85
ATXN3-241ENST00000556374 GGTLC3B5MD39 225 aa3.52□□□□□ -1.85
ATXN3-241ENST00000556374 HSBP1L1C9JCN9 74 aa3.52□□□□□ -1.85
ATXN3-241ENST00000556374 PPIAL4DF5H284 164 aa3.52□□□□□ -1.85
ATXN3-241ENST00000556374 INS-IGF2F8WCM5 200 aa3.52□□□□□ -1.85
ATXN3-241ENST00000556374 K7EQM0 130 aa3.52□□□□□ -1.85
ATXN3-241ENST00000556374 M0R2Z0 102 aa3.52□□□□□ -1.85
ATXN3-241ENST00000556374 SPINK4O60575 86 aa3.52□□□□□ -1.85
ATXN3-241ENST00000556374 SLC25A5P05141 298 aaKnown RBP3.52□□□□□ -1.85
ATXN3-241ENST00000556374 LINC00614P0C842 121 aa3.52□□□□□ -1.85
ATXN3-241ENST00000556374 PPIAL4FP0DN26 164 aa3.52□□□□□ -1.85
ATXN3-241ENST00000556374 RNASE2P10153 161 aaKnown RBP3.52□□□□□ -1.85
ATXN3-241ENST00000556374 SELLP14151 372 aa3.52□□□□□ -1.85
ATXN3-241ENST00000556374 COX6B1P14854 86 aa3.52□□□□□ -1.85
ATXN3-241ENST00000556374 ZNF25P17030 456 aaPredicted RBP3.52□□□□□ -1.85
ATXN3-241ENST00000556374 MC5RP33032 325 aa3.52□□□□□ -1.85
ATXN3-241ENST00000556374 MFAP2P55001 183 aa3.52□□□□□ -1.85
ATXN3-241ENST00000556374 HBBP68871 147 aa3.52□□□□□ -1.85
ATXN3-241ENST00000556374 OR5I1Q13606 314 aa3.52□□□□□ -1.85
ATXN3-241ENST00000556374 KRTCAP3Q53RY4 240 aa3.52□□□□□ -1.85
ATXN3-241ENST00000556374 TPTE2P1Q5T6R2 138 aa3.52□□□□□ -1.85
ATXN3-241ENST00000556374 LCE1EQ5T753 118 aa3.52□□□□□ -1.85
ATXN3-241ENST00000556374 TEX36Q5VZQ5 186 aa3.52□□□□□ -1.85
ATXN3-241ENST00000556374 CYB5R2Q6BCY4 276 aa3.52□□□□□ -1.85
ATXN3-241ENST00000556374 RNASEKQ6P5S7 137 aaKnown RBP3.52□□□□□ -1.85
ATXN3-241ENST00000556374 Q6ZN92 141 aa3.52□□□□□ -1.85
ATXN3-241ENST00000556374 TMEM136Q6ZRR5 245 aa3.52□□□□□ -1.85
ATXN3-241ENST00000556374 ZNF439Q8NDP4 499 aa3.52□□□□□ -1.85
ATXN3-241ENST00000556374 NUP37Q8NFH4 326 aa3.52□□□□□ -1.85
ATXN3-241ENST00000556374 TMEM167AQ8TBQ9 72 aa3.52□□□□□ -1.85
ATXN3-241ENST00000556374 WIPF2Q8TF74 440 aaPredicted RBP3.52□□□□□ -1.85
ATXN3-241ENST00000556374 FMC1Q96HJ9 113 aa3.52□□□□□ -1.85
ATXN3-241ENST00000556374 SLC25A2Q9BXI2 301 aa3.52□□□□□ -1.85
ATXN3-241ENST00000556374 SNHG12Q9BXW3 62 aa3.52□□□□□ -1.85
ATXN3-241ENST00000556374 GNB4Q9HAV0 340 aa3.52□□□□□ -1.85
ATXN3-241ENST00000556374 DNAJC4Q9NNZ3 241 aa3.52□□□□□ -1.85
ATXN3-241ENST00000556374 NGBQ9NPG2 151 aa3.52□□□□□ -1.85
ATXN3-241ENST00000556374 ZNF355PQ9NSJ1 428 aa3.52□□□□□ -1.85
ATXN3-241ENST00000556374 PPIAL4AQ9Y536 164 aa3.52□□□□□ -1.85
ATXN3-241ENST00000556374 ABCA4P78363 2273 aa3.52□□□□□ -1.85
ATXN3-241ENST00000556374 ALPK2Q86TB3 2170 aa3.52□□□□□ -1.85
ATXN3-241ENST00000556374 A0A1B0GUS0 222 aa3.51□□□□□ -1.85
ATXN3-241ENST00000556374 A8MWL6 223 aa3.51□□□□□ -1.85
ATXN3-241ENST00000556374 H0YJW9 148 aa3.51□□□□□ -1.85
ATXN3-241ENST00000556374 BMPR1BO00238 502 aa3.51□□□□□ -1.85
ATXN3-241ENST00000556374 CHEK1O14757 476 aa3.51□□□□□ -1.85
ATXN3-241ENST00000556374 ENSAO43768 121 aaKnown RBP3.51□□□□□ -1.85
ATXN3-241ENST00000556374 HYPMO75409 117 aa3.51□□□□□ -1.85
ATXN3-241ENST00000556374 WISP2O76076 250 aa3.51□□□□□ -1.85
ATXN3-241ENST00000556374 LHBP01229 141 aa3.51□□□□□ -1.85
ATXN3-241ENST00000556374 P01737 135 aa3.51□□□□□ -1.85
ATXN3-241ENST00000556374 REG1AP05451 166 aa3.51□□□□□ -1.85
ATXN3-241ENST00000556374 GPX1P07203 203 aa3.51□□□□□ -1.85
ATXN3-241ENST00000556374 MYOD1P15172 320 aa3.51□□□□□ -1.85
ATXN3-241ENST00000556374 S100A7P31151 101 aa3.51□□□□□ -1.85
ATXN3-241ENST00000556374 RPL27AP46776 148 aaKnown RBP3.51□□□□□ -1.85
ATXN3-241ENST00000556374 COMPP49747 757 aaPredicted RBP3.51□□□□□ -1.85
ATXN3-241ENST00000556374 SLC35B1P78383 322 aa3.51□□□□□ -1.85
ATXN3-241ENST00000556374 RBPJQ06330 500 aa3.51□□□□□ -1.85
ATXN3-241ENST00000556374 GAGE1Q13065 139 aa3.51□□□□□ -1.85
ATXN3-241ENST00000556374 PLGLAQ15195 96 aa3.51□□□□□ -1.85
ATXN3-241ENST00000556374 C18orf65Q6ZTR6 163 aa3.51□□□□□ -1.85
ATXN3-241ENST00000556374 ZNF329Q86UD4 541 aa3.51□□□□□ -1.85
ATXN3-241ENST00000556374 C8orf31Q8N9H6 132 aa3.51□□□□□ -1.85
ATXN3-241ENST00000556374 THAP8Q8NA92 274 aa3.51□□□□□ -1.85
ATXN3-241ENST00000556374 C5orf17Q8NAS9 161 aa3.51□□□□□ -1.85
ATXN3-241ENST00000556374 ST6GALNAC3Q8NDV1 305 aa3.51□□□□□ -1.85
ATXN3-241ENST00000556374 OR1B1Q8NGR6 318 aa3.51□□□□□ -1.85
ATXN3-241ENST00000556374 OR9G1Q8NH87 305 aa3.51□□□□□ -1.85
ATXN3-241ENST00000556374 FAM57AQ8TBR7 257 aa3.51□□□□□ -1.85
ATXN3-241ENST00000556374 IGFBPL1Q8WX77 278 aa3.51□□□□□ -1.85
ATXN3-241ENST00000556374 IGF2BP2-AS1Q96M15 143 aa3.51□□□□□ -1.85
ATXN3-241ENST00000556374 ATG101Q9BSB4 218 aa3.51□□□□□ -1.85
ATXN3-241ENST00000556374 SLC25A33Q9BSK2 321 aa3.51□□□□□ -1.85
ATXN3-241ENST00000556374 RPP21Q9H633 154 aaKnown RBP3.51□□□□□ -1.85
ATXN3-241ENST00000556374 LINC00574Q9H8X3 128 aa3.51□□□□□ -1.85
ATXN3-241ENST00000556374 NRN1Q9NPD7 142 aa3.51□□□□□ -1.85
ATXN3-241ENST00000556374 NDUFA4L2Q9NRX3 87 aa3.51□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms