RNA–Protein interactions for RNA: ENST00000555557.5

SRP54-208, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 1,949 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-208ENST00000555557 HIGD1AQ9Y241 93 aa7.84□□□□□ -1.16
SRP54-208ENST00000555557 ZNF320A2RRD8 509 aa7.83□□□□□ -1.16
SRP54-208ENST00000555557 C5orf52A6NGY3 159 aa7.83□□□□□ -1.16
SRP54-208ENST00000555557 SNRPEP62304 92 aaKnown RBP7.83□□□□□ -1.16
SRP54-208ENST00000555557 C8orf86Q6ZUL3 223 aa7.83□□□□□ -1.16
SRP54-208ENST00000555557 PRIMA1Q86XR5 153 aa7.83□□□□□ -1.16
SRP54-208ENST00000555557 C2CD4CQ8TF44 421 aa7.83□□□□□ -1.16
SRP54-208ENST00000555557 C19orf24Q9BVV8 132 aa7.83□□□□□ -1.16
SRP54-208ENST00000555557 SCRT1Q9BWW7 348 aa7.83□□□□□ -1.16
SRP54-208ENST00000555557 SLC25A2Q9BXI2 301 aa7.83□□□□□ -1.16
SRP54-208ENST00000555557 IGHV3OR16-13A0A075B7E8 117 aa7.82□□□□□ -1.16
SRP54-208ENST00000555557 IGHV3-49A0A0A0MS15 119 aa7.82□□□□□ -1.16
SRP54-208ENST00000555557 IGHV3-74A0A0B4J1X5 117 aa7.82□□□□□ -1.16
SRP54-208ENST00000555557 IGHV3-66A0A0C4DH42 116 aa7.82□□□□□ -1.16
SRP54-208ENST00000555557 STAG3L2P0CL84 134 aa7.82□□□□□ -1.16
SRP54-208ENST00000555557 STAG3L3P0CL85 134 aa7.82□□□□□ -1.16
SRP54-208ENST00000555557 ARL14EPLP0DKL9 152 aa7.82□□□□□ -1.16
SRP54-208ENST00000555557 PEA15Q15121 130 aa7.82□□□□□ -1.16
SRP54-208ENST00000555557 RPEL1Q2QD12 228 aa7.82□□□□□ -1.16
SRP54-208ENST00000555557 ZFP82Q8N141 532 aa7.82□□□□□ -1.16
SRP54-208ENST00000555557 OR11H1Q8NG94 326 aa7.82□□□□□ -1.16
SRP54-208ENST00000555557 C4orf3Q8WVX3 66 aa7.82□□□□□ -1.16
SRP54-208ENST00000555557 ZNF503Q96F45 646 aa7.82□□□□□ -1.16
SRP54-208ENST00000555557 FAM167A-AS1Q96KT0 104 aa7.82□□□□□ -1.16
SRP54-208ENST00000555557 SEC11CQ9BY50 192 aa7.82□□□□□ -1.16
SRP54-208ENST00000555557 NDUFA4O00483 81 aa7.82□□□□□ -1.16
SRP54-208ENST00000555557 OR7C2O60412 319 aa7.82□□□□□ -1.16
SRP54-208ENST00000555557 APOHP02749 345 aaPredicted RBP7.82□□□□□ -1.16
SRP54-208ENST00000555557 HSPB1P04792 205 aaKnown RBP7.82□□□□□ -1.16
SRP54-208ENST00000555557 OR10J4P0C629 311 aa7.82□□□□□ -1.16
SRP54-208ENST00000555557 C8orf88P0DMB2 117 aa7.82□□□□□ -1.16
SRP54-208ENST00000555557 PYYP10082 97 aa7.82□□□□□ -1.16
SRP54-208ENST00000555557 KRTAP21-3Q3LHN1 58 aa7.82□□□□□ -1.16
SRP54-208ENST00000555557 C15orf54Q8N8G6 183 aa7.82□□□□□ -1.16
SRP54-208ENST00000555557 MRPL32Q9BYC8 188 aaKnown RBP7.82□□□□□ -1.16
SRP54-208ENST00000555557 TECRQ9NZ01 308 aaKnown RBP7.82□□□□□ -1.16
SRP54-208ENST00000555557 RABAC1Q9UI14 185 aa7.82□□□□□ -1.16
SRP54-208ENST00000555557 TRAV1-1A0A0B4J248 108 aa7.81□□□□□ -1.16
SRP54-208ENST00000555557 HBE1P02100 147 aa7.81□□□□□ -1.16
SRP54-208ENST00000555557 ADCYAP1P18509 176 aa7.81□□□□□ -1.16
SRP54-208ENST00000555557 EDN2P20800 178 aa7.81□□□□□ -1.16
SRP54-208ENST00000555557 HOXD3P31249 432 aaPredicted RBP7.81□□□□□ -1.16
SRP54-208ENST00000555557 SLURP1P55000 103 aa7.81□□□□□ -1.16
SRP54-208ENST00000555557 SYNJ2BPP57105 145 aa7.81□□□□□ -1.16
SRP54-208ENST00000555557 SRSF3P84103 164 aaKnown RBP7.81□□□□□ -1.16
SRP54-208ENST00000555557 TM4SF20Q53R12 229 aa7.81□□□□□ -1.16
SRP54-208ENST00000555557 RNF2Q99496 336 aa7.81□□□□□ -1.16
SRP54-208ENST00000555557 SHANK2-AS3Q9BTD1 123 aa7.81□□□□□ -1.16
SRP54-208ENST00000555557 SMCO4Q9NRQ5 59 aa7.81□□□□□ -1.16
SRP54-208ENST00000555557 GNG13Q9P2W3 67 aa7.81□□□□□ -1.16
SRP54-208ENST00000555557 TSSC4Q9Y5U2 329 aaPredicted RBP7.81□□□□□ -1.16
SRP54-208ENST00000555557 COLCA2A8K830 154 aa7.8□□□□□ -1.16
SRP54-208ENST00000555557 H3BRN7 92 aa7.8□□□□□ -1.16
SRP54-208ENST00000555557 CXorf1O96002 111 aa7.8□□□□□ -1.16
SRP54-208ENST00000555557 BTF3P20290 206 aaKnown RBP7.8□□□□□ -1.16
SRP54-208ENST00000555557 TAS2R45P59539 299 aa7.8□□□□□ -1.16
SRP54-208ENST00000555557 HAGHQ16775 308 aa7.8□□□□□ -1.16
SRP54-208ENST00000555557 KRTAP24-1Q3LI83 254 aa7.8□□□□□ -1.16
SRP54-208ENST00000555557 FAM106AQ4KMX7 169 aa7.8□□□□□ -1.16
SRP54-208ENST00000555557 IL34Q6ZMJ4 242 aa7.8□□□□□ -1.16
SRP54-208ENST00000555557 GPHB5Q86YW7 130 aa7.8□□□□□ -1.16
SRP54-208ENST00000555557 OR1N2Q8NGR9 330 aa7.8□□□□□ -1.16
SRP54-208ENST00000555557 TMEM190Q8WZ59 177 aa7.8□□□□□ -1.16
SRP54-208ENST00000555557 RARRES2Q99969 163 aa7.8□□□□□ -1.16
SRP54-208ENST00000555557 TMEM231Q9H6L2 316 aa7.8□□□□□ -1.16
SRP54-208ENST00000555557 TREM1Q9NP99 234 aa7.8□□□□□ -1.16
SRP54-208ENST00000555557 SELENOKQ9Y6D0 94 aa7.8□□□□□ -1.16
SRP54-208ENST00000555557 LINC01619G3V211 115 aa7.8□□□□□ -1.16
SRP54-208ENST00000555557 H3BTX0 84 aa7.8□□□□□ -1.16
SRP54-208ENST00000555557 NDUFS6O75380 124 aaKnown RBP7.8□□□□□ -1.16
SRP54-208ENST00000555557 NPPCP23582 126 aa7.8□□□□□ -1.16
SRP54-208ENST00000555557 GCHFRP30047 84 aa7.8□□□□□ -1.16
SRP54-208ENST00000555557 FOXL1Q12952 345 aa7.8□□□□□ -1.16
SRP54-208ENST00000555557 NSUN5P1Q3KNT7 163 aa7.8□□□□□ -1.16
SRP54-208ENST00000555557 KHDC3LQ587J8 217 aa7.8□□□□□ -1.16
SRP54-208ENST00000555557 DPF1Q92782 380 aa7.8□□□□□ -1.16
SRP54-208ENST00000555557 RAX2Q96IS3 184 aa7.8□□□□□ -1.16
SRP54-208ENST00000555557 METTL26Q96S19 204 aa7.8□□□□□ -1.16
SRP54-208ENST00000555557 PAXXQ9BUH6 204 aa7.8□□□□□ -1.16
SRP54-208ENST00000555557 A0A1B0GUS0 222 aa7.79□□□□□ -1.16
SRP54-208ENST00000555557 ADARB2-AS1A8MUL3 147 aa7.79□□□□□ -1.16
SRP54-208ENST00000555557 CRYBB3P26998 211 aa7.79□□□□□ -1.16
SRP54-208ENST00000555557 UBE2G2P60604 165 aa7.79□□□□□ -1.16
SRP54-208ENST00000555557 AWAT1Q58HT5 328 aa7.79□□□□□ -1.16
SRP54-208ENST00000555557 WFDC12Q8WWY7 111 aa7.79□□□□□ -1.16
SRP54-208ENST00000555557 EIF5A2Q9GZV4 153 aaKnown RBP7.79□□□□□ -1.16
SRP54-208ENST00000555557 ATRQ13535 2644 aa7.79□□□□□ -1.16
SRP54-208ENST00000555557 BUB3O43684 328 aa7.78□□□□□ -1.16
SRP54-208ENST00000555557 UBE2L3P68036 154 aaKnown RBP7.78□□□□□ -1.16
SRP54-208ENST00000555557 GUK1Q16774 197 aa7.78□□□□□ -1.16
SRP54-208ENST00000555557 PQLC2Q6ZP29 291 aa7.78□□□□□ -1.16
SRP54-208ENST00000555557 OR8I2Q8N0Y5 310 aa7.78□□□□□ -1.16
SRP54-208ENST00000555557 BLNKQ8WV28 456 aa7.78□□□□□ -1.16
SRP54-208ENST00000555557 FXYD5Q96DB9 178 aa7.78□□□□□ -1.16
SRP54-208ENST00000555557 DAZ1Q9NQZ3 744 aaKnown RBP7.78□□□□□ -1.16
SRP54-208ENST00000555557 RBFOX3A6NFN3 312 aa7.78□□□□□ -1.16
SRP54-208ENST00000555557 H3BQ15 152 aa7.78□□□□□ -1.16
SRP54-208ENST00000555557 CCL24O00175 119 aa7.78□□□□□ -1.16
SRP54-208ENST00000555557 PAGE4O60829 102 aa7.78□□□□□ -1.16
SRP54-208ENST00000555557 GP9P14770 177 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms