RNA–Protein interactions for RNA: ENST00000553527.1

TDP1-205, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 910 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-205ENST00000553527 ZNF709Q8N972 641 aa17.43■□□□□ 0.38
TDP1-205ENST00000553527 ARL6Q9H0F7 186 aa17.43■□□□□ 0.38
TDP1-205ENST00000553527 KCNIP2Q9NS61 270 aa17.43■□□□□ 0.38
TDP1-205ENST00000553527 HYPMO75409 117 aa17.42■□□□□ 0.38
TDP1-205ENST00000553527 RPL29P47914 159 aaKnown RBP17.42■□□□□ 0.38
TDP1-205ENST00000553527 PLP1P60201 277 aa17.42■□□□□ 0.38
TDP1-205ENST00000553527 PXDC1Q5TGL8 231 aa17.42■□□□□ 0.38
TDP1-205ENST00000553527 PARD6GQ9BYG4 376 aaPredicted RBP17.42■□□□□ 0.38
TDP1-205ENST00000553527 PXMP4Q9Y6I8 212 aa17.42■□□□□ 0.38
TDP1-205ENST00000553527 HELTA6NFD8 242 aa17.41■□□□□ 0.38
TDP1-205ENST00000553527 C17orf112F2Z3M2 114 aa17.41■□□□□ 0.38
TDP1-205ENST00000553527 K7EQG2 157 aa17.41■□□□□ 0.38
TDP1-205ENST00000553527 OR5G3P0C626 314 aa17.41■□□□□ 0.38
TDP1-205ENST00000553527 S100A7P31151 101 aa17.41■□□□□ 0.38
TDP1-205ENST00000553527 B2MP61769 119 aa17.41■□□□□ 0.38
TDP1-205ENST00000553527 PRR20EP86478 221 aa17.41■□□□□ 0.38
TDP1-205ENST00000553527 PRR20CP86479 221 aa17.41■□□□□ 0.38
TDP1-205ENST00000553527 PRR20DP86480 221 aa17.41■□□□□ 0.38
TDP1-205ENST00000553527 PRR20BP86481 221 aa17.41■□□□□ 0.38
TDP1-205ENST00000553527 PRR20AP86496 221 aa17.41■□□□□ 0.38
TDP1-205ENST00000553527 ZNF345Q14585 488 aa17.41■□□□□ 0.38
TDP1-205ENST00000553527 Q6ZRG5 221 aa17.41■□□□□ 0.38
TDP1-205ENST00000553527 GLMPQ8WWB7 406 aa17.41■□□□□ 0.38
TDP1-205ENST00000553527 HIGD1AQ9Y241 93 aa17.41■□□□□ 0.38
TDP1-205ENST00000553527 TRAV2A0A0B4J234 112 aa17.4■□□□□ 0.38
TDP1-205ENST00000553527 KIR2DL5BA0A0G2JN68 375 aa17.4■□□□□ 0.38
TDP1-205ENST00000553527 KIR2DL5BA0A0G2JPC4 375 aa17.4■□□□□ 0.38
TDP1-205ENST00000553527 UBE2CO00762 179 aa17.4■□□□□ 0.38
TDP1-205ENST00000553527 SPRY2O43597 315 aa17.4■□□□□ 0.38
TDP1-205ENST00000553527 BUB3O43684 328 aa17.4■□□□□ 0.38
TDP1-205ENST00000553527 COX7A2P2O60397 106 aa17.4■□□□□ 0.38
TDP1-205ENST00000553527 C1QBP02746 253 aa17.4■□□□□ 0.38
TDP1-205ENST00000553527 ZNF688P0C7X2 276 aa17.4■□□□□ 0.38
TDP1-205ENST00000553527 KIR2DL5AQ8N109 375 aa17.4■□□□□ 0.38
TDP1-205ENST00000553527 KIR2DL5BQ8NHK3 375 aa17.4■□□□□ 0.38
TDP1-205ENST00000553527 SLC39A9Q9NUM3 307 aa17.4■□□□□ 0.38
TDP1-205ENST00000553527 DNAH7Q8WXX0 4024 aa17.4■□□□□ 0.38
TDP1-205ENST00000553527 Q6ZWC4 215 aa17.39■□□□□ 0.37
TDP1-205ENST00000553527 S100A7AQ86SG5 101 aa17.39■□□□□ 0.37
TDP1-205ENST00000553527 DCANP1Q8TF63 244 aa17.39■□□□□ 0.37
TDP1-205ENST00000553527 RSG1Q9BU20 258 aa17.39■□□□□ 0.37
TDP1-205ENST00000553527 CSTL1Q9H114 145 aa17.39■□□□□ 0.37
TDP1-205ENST00000553527 BORCS7-ASMTA0A0B4J1R7 106 aa17.38■□□□□ 0.37
TDP1-205ENST00000553527 CD300CQ08708 224 aa17.38■□□□□ 0.37
TDP1-205ENST00000553527 SIGLEC15Q6ZMC9 328 aa17.38■□□□□ 0.37
TDP1-205ENST00000553527 KCNRGQ8N5I3 272 aa17.38■□□□□ 0.37
TDP1-205ENST00000553527 OR1L4Q8NGR5 311 aa17.38■□□□□ 0.37
TDP1-205ENST00000553527 ARV1Q9H2C2 271 aa17.38■□□□□ 0.37
TDP1-205ENST00000553527 TAAR5O14804 337 aa17.37■□□□□ 0.37
TDP1-205ENST00000553527 STHQ8IWL8 128 aa17.37■□□□□ 0.37
TDP1-205ENST00000553527 UHRF2Q96PU4 802 aa17.37■□□□□ 0.37
TDP1-205ENST00000553527 PFDN5Q99471 154 aa17.37■□□□□ 0.37
TDP1-205ENST00000553527 SLC25A39Q9BZJ4 359 aaPredicted RBP17.37■□□□□ 0.37
TDP1-205ENST00000553527 ELOA3CA0A087WX78 387 aaPredicted RBP17.36■□□□□ 0.37
TDP1-205ENST00000553527 A0A0D9SG52 128 aa17.36■□□□□ 0.37
TDP1-205ENST00000553527 H3BRN7 92 aa17.36■□□□□ 0.37
TDP1-205ENST00000553527 CXCL2P19875 107 aa17.36■□□□□ 0.37
TDP1-205ENST00000553527 C10orf113Q5VZT2 155 aa17.36■□□□□ 0.37
TDP1-205ENST00000553527 RPL7L1Q6DKI1 246 aaKnown RBP17.36■□□□□ 0.37
TDP1-205ENST00000553527 HSD17B11Q8NBQ5 300 aa17.36■□□□□ 0.37
TDP1-205ENST00000553527 ARPC5LQ9BPX5 153 aa17.36■□□□□ 0.37
TDP1-205ENST00000553527 SHANK2-AS3Q9BTD1 123 aa17.36■□□□□ 0.37
TDP1-205ENST00000553527 SCRT1Q9BWW7 348 aa17.36■□□□□ 0.37
TDP1-205ENST00000553527 SLC25A22Q9H936 323 aa17.36■□□□□ 0.37
TDP1-205ENST00000553527 KMT2CQ8NEZ4 4911 aaKnown RBP17.35■□□□□ 0.37
TDP1-205ENST00000553527 ZNF98A6NK75 572 aa17.35■□□□□ 0.37
TDP1-205ENST00000553527 KNCNA6PVL3 124 aa17.35■□□□□ 0.37
TDP1-205ENST00000553527 ZFP69Q49AA0 526 aa17.35■□□□□ 0.37
TDP1-205ENST00000553527 C1orf194Q5T5A4 169 aa17.35■□□□□ 0.37
TDP1-205ENST00000553527 PATE2Q6UY27 113 aa17.35■□□□□ 0.37
TDP1-205ENST00000553527 TMEM37Q8WXS4 190 aa17.35■□□□□ 0.37
TDP1-205ENST00000553527 RNF183Q96D59 192 aa17.35■□□□□ 0.37
TDP1-205ENST00000553527 HYLS1Q96M11 299 aa17.35■□□□□ 0.37
TDP1-205ENST00000553527 TP53TG1Q9Y2A0 90 aa17.35■□□□□ 0.37
TDP1-205ENST00000553527 TIMM9Q9Y5J7 89 aa17.35■□□□□ 0.37
TDP1-205ENST00000553527 KANTRA0A1W2PQU2 76 aa17.34■□□□□ 0.37
TDP1-205ENST00000553527 PSMG4Q5JS54 123 aa17.34■□□□□ 0.37
TDP1-205ENST00000553527 LINC00305Q7Z4B0 112 aa17.34■□□□□ 0.37
TDP1-205ENST00000553527 OR8I2Q8N0Y5 310 aa17.34■□□□□ 0.37
TDP1-205ENST00000553527 DNAJC4Q9NNZ3 241 aa17.34■□□□□ 0.37
TDP1-205ENST00000553527 NRN1Q9NPD7 142 aa17.34■□□□□ 0.37
TDP1-205ENST00000553527 RNF24Q9Y225 148 aa17.34■□□□□ 0.37
TDP1-205ENST00000553527 A0A0J9YWU9 116 aa17.33■□□□□ 0.36
TDP1-205ENST00000553527 BCL2L11O43521 198 aa17.33■□□□□ 0.36
TDP1-205ENST00000553527 PFDN1O60925 122 aa17.33■□□□□ 0.36
TDP1-205ENST00000553527 JTBO76095 146 aa17.33■□□□□ 0.36
TDP1-205ENST00000553527 CA1P00915 261 aaPredicted RBP17.33■□□□□ 0.36
TDP1-205ENST00000553527 ACTL10Q5JWF8 245 aa17.33■□□□□ 0.36
TDP1-205ENST00000553527 FFAR4Q5NUL3 377 aa17.33■□□□□ 0.36
TDP1-205ENST00000553527 ATP6V0CP27449 155 aa17.32■□□□□ 0.36
TDP1-205ENST00000553527 GCSAMLQ5JQS6 135 aa17.32■□□□□ 0.36
TDP1-205ENST00000553527 GATAD1Q8WUU5 269 aa17.32■□□□□ 0.36
TDP1-205ENST00000553527 SLC25A32Q9H2D1 315 aa17.32■□□□□ 0.36
TDP1-205ENST00000553527 SNRPD3P62318 126 aaKnown RBP17.31■□□□□ 0.36
TDP1-205ENST00000553527 TMUB2Q71RG4 321 aa17.31■□□□□ 0.36
TDP1-205ENST00000553527 IL17DQ8TAD2 202 aa17.31■□□□□ 0.36
TDP1-205ENST00000553527 GNPNAT1Q96EK6 184 aaPredicted RBP17.31■□□□□ 0.36
TDP1-205ENST00000553527 GPR82Q96P67 336 aa17.31■□□□□ 0.36
TDP1-205ENST00000553527 PSMG3Q9BT73 122 aaPredicted RBP17.31■□□□□ 0.36
TDP1-205ENST00000553527 CYTL1Q9NRR1 136 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms