RNA–Protein interactions for RNA: ENST00000536717.5

TNFRSF1A-209, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,503 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-209ENST00000536717 TMEM231Q9H6L2 316 aa13.22□□□□□ -0.29
TNFRSF1A-209ENST00000536717 BOLA2-SMG1P6H3BVE0 249 aa13.21□□□□□ -0.29
TNFRSF1A-209ENST00000536717 HYPMO75409 117 aa13.21□□□□□ -0.29
TNFRSF1A-209ENST00000536717 CD5P06127 495 aa13.21□□□□□ -0.29
TNFRSF1A-209ENST00000536717 EIF2B2P49770 351 aaKnown RBP13.21□□□□□ -0.29
TNFRSF1A-209ENST00000536717 PLP1P60201 277 aa13.21□□□□□ -0.29
TNFRSF1A-209ENST00000536717 B2MP61769 119 aa13.21□□□□□ -0.29
TNFRSF1A-209ENST00000536717 ZNF124Q15973 351 aa13.21□□□□□ -0.29
TNFRSF1A-209ENST00000536717 ZFP69Q49AA0 526 aa13.21□□□□□ -0.29
TNFRSF1A-209ENST00000536717 MIC13Q5XKP0 118 aa13.21□□□□□ -0.29
TNFRSF1A-209ENST00000536717 APRG1Q8IVJ8 170 aa13.21□□□□□ -0.29
TNFRSF1A-209ENST00000536717 KCNRGQ8N5I3 272 aa13.21□□□□□ -0.29
TNFRSF1A-209ENST00000536717 ARL6Q9H0F7 186 aa13.21□□□□□ -0.29
TNFRSF1A-209ENST00000536717 PXMP4Q9Y6I8 212 aa13.21□□□□□ -0.29
TNFRSF1A-209ENST00000536717 RYR2Q92736 4967 aa13.21□□□□□ -0.29
TNFRSF1A-209ENST00000536717 BORCS7-ASMTA0A0B4J1R7 106 aa13.2□□□□□ -0.3
TNFRSF1A-209ENST00000536717 OR5G3P0C626 314 aa13.2□□□□□ -0.3
TNFRSF1A-209ENST00000536717 PRR20EP86478 221 aa13.2□□□□□ -0.3
TNFRSF1A-209ENST00000536717 PRR20CP86479 221 aa13.2□□□□□ -0.3
TNFRSF1A-209ENST00000536717 PRR20DP86480 221 aa13.2□□□□□ -0.3
TNFRSF1A-209ENST00000536717 PRR20BP86481 221 aa13.2□□□□□ -0.3
TNFRSF1A-209ENST00000536717 PRR20AP86496 221 aa13.2□□□□□ -0.3
TNFRSF1A-209ENST00000536717 S100A7AQ86SG5 101 aa13.2□□□□□ -0.3
TNFRSF1A-209ENST00000536717 GRAMD2BQ96HH9 432 aa13.2□□□□□ -0.3
TNFRSF1A-209ENST00000536717 SLC39A9Q9NUM3 307 aa13.2□□□□□ -0.3
TNFRSF1A-209ENST00000536717 DOK5Q9P104 306 aa13.2□□□□□ -0.3
TNFRSF1A-209ENST00000536717 CXCL2P19875 107 aa13.19□□□□□ -0.3
TNFRSF1A-209ENST00000536717 ARPC5LQ9BPX5 153 aa13.19□□□□□ -0.3
TNFRSF1A-209ENST00000536717 MS4A6AQ9H2W1 248 aa13.19□□□□□ -0.3
TNFRSF1A-209ENST00000536717 MAP6D1Q9H9H5 199 aa13.19□□□□□ -0.3
TNFRSF1A-209ENST00000536717 U3KQE9 123 aa13.19□□□□□ -0.3
TNFRSF1A-209ENST00000536717 KANTRA0A1W2PQU2 76 aa13.18□□□□□ -0.3
TNFRSF1A-209ENST00000536717 COX7A2P2O60397 106 aa13.18□□□□□ -0.3
TNFRSF1A-209ENST00000536717 RPL35AP18077 110 aaKnown RBP13.18□□□□□ -0.3
TNFRSF1A-209ENST00000536717 APOC4P55056 127 aa13.18□□□□□ -0.3
TNFRSF1A-209ENST00000536717 PAFAH1B2P68402 229 aa13.18□□□□□ -0.3
TNFRSF1A-209ENST00000536717 WFDC3Q8IUB2 231 aa13.18□□□□□ -0.3
TNFRSF1A-209ENST00000536717 RSG1Q9BU20 258 aa13.18□□□□□ -0.3
TNFRSF1A-209ENST00000536717 HIGD1AQ9Y241 93 aa13.18□□□□□ -0.3
TNFRSF1A-209ENST00000536717 ELOA3CA0A087WX78 387 aaPredicted RBP13.18□□□□□ -0.3
TNFRSF1A-209ENST00000536717 KIR2DL5BA0A0G2JN68 375 aa13.18□□□□□ -0.3
TNFRSF1A-209ENST00000536717 KIR2DL5BA0A0G2JPC4 375 aa13.18□□□□□ -0.3
TNFRSF1A-209ENST00000536717 JTBO76095 146 aa13.18□□□□□ -0.3
TNFRSF1A-209ENST00000536717 CMC4P56277 68 aaPredicted RBP13.18□□□□□ -0.3
TNFRSF1A-209ENST00000536717 RPL7L1Q6DKI1 246 aaKnown RBP13.18□□□□□ -0.3
TNFRSF1A-209ENST00000536717 Q6ZWC4 215 aa13.18□□□□□ -0.3
TNFRSF1A-209ENST00000536717 KIR2DL5AQ8N109 375 aa13.18□□□□□ -0.3
TNFRSF1A-209ENST00000536717 FAM24BQ8N5W8 94 aa13.18□□□□□ -0.3
TNFRSF1A-209ENST00000536717 HSD17B11Q8NBQ5 300 aa13.18□□□□□ -0.3
TNFRSF1A-209ENST00000536717 OR1L4Q8NGR5 311 aa13.18□□□□□ -0.3
TNFRSF1A-209ENST00000536717 KIR2DL5BQ8NHK3 375 aa13.18□□□□□ -0.3
TNFRSF1A-209ENST00000536717 PFDN5Q99471 154 aa13.18□□□□□ -0.3
TNFRSF1A-209ENST00000536717 ARV1Q9H2C2 271 aa13.18□□□□□ -0.3
TNFRSF1A-209ENST00000536717 PLECQ15149 4684 aaKnown RBP13.17□□□□□ -0.3
TNFRSF1A-209ENST00000536717 TRAV2A0A0B4J234 112 aa13.17□□□□□ -0.3
TNFRSF1A-209ENST00000536717 BUB3O43684 328 aa13.17□□□□□ -0.3
TNFRSF1A-209ENST00000536717 RPL11P62913 178 aaKnown RBP13.17□□□□□ -0.3
TNFRSF1A-209ENST00000536717 DEFB135Q30KP9 77 aa13.17□□□□□ -0.3
TNFRSF1A-209ENST00000536717 DNAJC4Q9NNZ3 241 aa13.17□□□□□ -0.3
TNFRSF1A-209ENST00000536717 TIMM9Q9Y5J7 89 aa13.17□□□□□ -0.3
TNFRSF1A-209ENST00000536717 DNASE2O00115 360 aaPredicted RBP13.16□□□□□ -0.3
TNFRSF1A-209ENST00000536717 UBE2CO00762 179 aa13.16□□□□□ -0.3
TNFRSF1A-209ENST00000536717 BCL2L11O43521 198 aa13.16□□□□□ -0.3
TNFRSF1A-209ENST00000536717 C10orf113Q5VZT2 155 aa13.16□□□□□ -0.3
TNFRSF1A-209ENST00000536717 TMUB2Q71RG4 321 aa13.16□□□□□ -0.3
TNFRSF1A-209ENST00000536717 SLC25A39Q9BZJ4 359 aaPredicted RBP13.16□□□□□ -0.3
TNFRSF1A-209ENST00000536717 RNF24Q9Y225 148 aa13.16□□□□□ -0.3
TNFRSF1A-209ENST00000536717 TP53TG1Q9Y2A0 90 aa13.16□□□□□ -0.3
TNFRSF1A-209ENST00000536717 ZNF98A6NK75 572 aa13.15□□□□□ -0.3
TNFRSF1A-209ENST00000536717 ATP6V0CP27449 155 aa13.15□□□□□ -0.3
TNFRSF1A-209ENST00000536717 LGALSLQ3ZCW2 172 aaPredicted RBP13.15□□□□□ -0.3
TNFRSF1A-209ENST00000536717 C1orf194Q5T5A4 169 aa13.15□□□□□ -0.3
TNFRSF1A-209ENST00000536717 C16orf54Q6UWD8 224 aa13.15□□□□□ -0.3
TNFRSF1A-209ENST00000536717 PATE2Q6UY27 113 aa13.15□□□□□ -0.3
TNFRSF1A-209ENST00000536717 GATAD1Q8WUU5 269 aa13.15□□□□□ -0.3
TNFRSF1A-209ENST00000536717 TMEM37Q8WXS4 190 aa13.15□□□□□ -0.3
TNFRSF1A-209ENST00000536717 GNPNAT1Q96EK6 184 aaPredicted RBP13.15□□□□□ -0.3
TNFRSF1A-209ENST00000536717 UHRF2Q96PU4 802 aa13.15□□□□□ -0.3
TNFRSF1A-209ENST00000536717 PSMG3Q9BT73 122 aaPredicted RBP13.15□□□□□ -0.3
TNFRSF1A-209ENST00000536717 CYTL1Q9NRR1 136 aa13.15□□□□□ -0.3
TNFRSF1A-209ENST00000536717 HELTA6NFD8 242 aa13.14□□□□□ -0.31
TNFRSF1A-209ENST00000536717 H3BRN7 92 aa13.14□□□□□ -0.31
TNFRSF1A-209ENST00000536717 SPRY2O43597 315 aa13.14□□□□□ -0.31
TNFRSF1A-209ENST00000536717 DEFB131AP59861 70 aa13.14□□□□□ -0.31
TNFRSF1A-209ENST00000536717 FFAR4Q5NUL3 377 aa13.14□□□□□ -0.31
TNFRSF1A-209ENST00000536717 LINC00305Q7Z4B0 112 aa13.14□□□□□ -0.31
TNFRSF1A-209ENST00000536717 OR8I2Q8N0Y5 310 aa13.14□□□□□ -0.31
TNFRSF1A-209ENST00000536717 STXBP6Q8NFX7 210 aa13.14□□□□□ -0.31
TNFRSF1A-209ENST00000536717 GLMPQ8WWB7 406 aa13.14□□□□□ -0.31
TNFRSF1A-209ENST00000536717 SHANK2-AS3Q9BTD1 123 aa13.14□□□□□ -0.31
TNFRSF1A-209ENST00000536717 ZNF471Q9BX82 626 aaPredicted RBP13.14□□□□□ -0.31
TNFRSF1A-209ENST00000536717 SLC25A22Q9H936 323 aa13.14□□□□□ -0.31
TNFRSF1A-209ENST00000536717 DNAH1Q9P2D7 4330 aa13.14□□□□□ -0.31
TNFRSF1A-209ENST00000536717 K7EQG2 157 aa13.13□□□□□ -0.31
TNFRSF1A-209ENST00000536717 EIF5AP63241 154 aaKnown RBP13.13□□□□□ -0.31
TNFRSF1A-209ENST00000536717 LEMD1Q68G75 181 aa13.13□□□□□ -0.31
TNFRSF1A-209ENST00000536717 DCANP1Q8TF63 244 aa13.13□□□□□ -0.31
TNFRSF1A-209ENST00000536717 RNF183Q96D59 192 aa13.13□□□□□ -0.31
TNFRSF1A-209ENST00000536717 SCRT1Q9BWW7 348 aa13.13□□□□□ -0.31
TNFRSF1A-209ENST00000536717 C4BPBP20851 252 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms