RNA–Protein interactions for RNA: ENST00000531995.1

PUF60-218, Transcript of poly(U) binding splicing factor 60, human

TSL 3

Gene PUF60, Length 631 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PUF60-218	ENST00000531995	TFPI2	P48307	235 aa		13.8	□□□□□ -0.2
PUF60-218	ENST00000531995	ODF3L2	Q3SX64	289 aa		13.8	□□□□□ -0.2
PUF60-218	ENST00000531995	PXDC1	Q5TGL8	231 aa		13.8	□□□□□ -0.2
PUF60-218	ENST00000531995	MORN5	Q5VZ52	161 aa		13.8	□□□□□ -0.2
PUF60-218	ENST00000531995	LEMD1	Q68G75	181 aa		13.8	□□□□□ -0.2
PUF60-218	ENST00000531995	DCANP1	Q8TF63	244 aa		13.8	□□□□□ -0.2
PUF60-218	ENST00000531995	PARD6G	Q9BYG4	376 aa	Predicted RBP	13.8	□□□□□ -0.2
PUF60-218	ENST00000531995	ARV1	Q9H2C2	271 aa		13.8	□□□□□ -0.2
PUF60-218	ENST00000531995	HIGD1A	Q9Y241	93 aa		13.8	□□□□□ -0.2
PUF60-218	ENST00000531995	PXMP4	Q9Y6I8	212 aa		13.8	□□□□□ -0.2
PUF60-218	ENST00000531995	TRAV2	A0A0B4J234	112 aa		13.79	□□□□□ -0.2
PUF60-218	ENST00000531995		K7EQG2	157 aa		13.79	□□□□□ -0.2
PUF60-218	ENST00000531995	B2M	P61769	119 aa		13.79	□□□□□ -0.2
PUF60-218	ENST00000531995	RPL11	P62913	178 aa	Known RBP	13.79	□□□□□ -0.2
PUF60-218	ENST00000531995	SIGLEC15	Q6ZMC9	328 aa		13.79	□□□□□ -0.2
PUF60-218	ENST00000531995	WFDC3	Q8IUB2	231 aa		13.79	□□□□□ -0.2
PUF60-218	ENST00000531995	DEFB125	Q8N687	156 aa		13.79	□□□□□ -0.2
PUF60-218	ENST00000531995	SLC25A32	Q9H2D1	315 aa		13.79	□□□□□ -0.2
PUF60-218	ENST00000531995	DNAJC4	Q9NNZ3	241 aa		13.79	□□□□□ -0.2
PUF60-218	ENST00000531995	HELT	A6NFD8	242 aa		13.78	□□□□□ -0.2
PUF60-218	ENST00000531995	OR4C46	A6NHA9	309 aa		13.78	□□□□□ -0.2
PUF60-218	ENST00000531995	NUP62	P37198	522 aa	Predicted RBP	13.78	□□□□□ -0.2
PUF60-218	ENST00000531995	GCSAML	Q5JQS6	135 aa		13.78	□□□□□ -0.2
PUF60-218	ENST00000531995	INO80E	Q8NBZ0	244 aa	Predicted RBP	13.78	□□□□□ -0.2
PUF60-218	ENST00000531995	PPP1R14B	Q96C90	147 aa		13.78	□□□□□ -0.2
PUF60-218	ENST00000531995	RSG1	Q9BU20	258 aa		13.78	□□□□□ -0.2
PUF60-218	ENST00000531995	UBQLN2	Q9UHD9	624 aa		13.78	□□□□□ -0.2
PUF60-218	ENST00000531995	PFDN2	Q9UHV9	154 aa		13.78	□□□□□ -0.2
PUF60-218	ENST00000531995	ELOA3C	A0A087WX78	387 aa	Predicted RBP	13.77	□□□□□ -0.21
PUF60-218	ENST00000531995	OR11H12	B2RN74	326 aa		13.77	□□□□□ -0.21
PUF60-218	ENST00000531995	MRPS12	O15235	138 aa	Known RBP	13.77	□□□□□ -0.21
PUF60-218	ENST00000531995	AP2S1	P53680	142 aa	Predicted RBP	13.77	□□□□□ -0.21
PUF60-218	ENST00000531995	PAFAH1B2	P68402	229 aa		13.77	□□□□□ -0.21
PUF60-218	ENST00000531995		Q6ZRG5	221 aa		13.77	□□□□□ -0.21
PUF60-218	ENST00000531995	LINC00305	Q7Z4B0	112 aa		13.77	□□□□□ -0.21
PUF60-218	ENST00000531995	OR8I2	Q8N0Y5	310 aa		13.77	□□□□□ -0.21
PUF60-218	ENST00000531995	STXBP6	Q8NFX7	210 aa		13.77	□□□□□ -0.21
PUF60-218	ENST00000531995	SRD5A3	Q9H8P0	318 aa		13.77	□□□□□ -0.21
PUF60-218	ENST00000531995	SLC25A22	Q9H936	323 aa		13.77	□□□□□ -0.21
PUF60-218	ENST00000531995	HMSD	A8MTL9	139 aa		13.76	□□□□□ -0.21
PUF60-218	ENST00000531995	ARPC5	O15511	151 aa		13.76	□□□□□ -0.21
PUF60-218	ENST00000531995	COX7A2P2	O60397	106 aa		13.76	□□□□□ -0.21
PUF60-218	ENST00000531995	IFNA5	P01569	189 aa		13.76	□□□□□ -0.21
PUF60-218	ENST00000531995	C10orf113	Q5VZT2	155 aa		13.76	□□□□□ -0.21
PUF60-218	ENST00000531995	LINC00322	Q6ZN03	302 aa	Predicted RBP	13.76	□□□□□ -0.21
PUF60-218	ENST00000531995	TCTE3	Q8IZS6	198 aa		13.76	□□□□□ -0.21
PUF60-218	ENST00000531995	CYTL1	Q9NRR1	136 aa		13.76	□□□□□ -0.21
PUF60-218	ENST00000531995	TRAV5	A0A0B4J249	113 aa		13.75	□□□□□ -0.21
PUF60-218	ENST00000531995	RBMY1B	A6NDE4	496 aa	Known RBP	13.75	□□□□□ -0.21
PUF60-218	ENST00000531995	RBMY1E	A6NEQ0	496 aa	Known RBP	13.75	□□□□□ -0.21
PUF60-218	ENST00000531995	DNASE2	O00115	360 aa	Predicted RBP	13.75	□□□□□ -0.21
PUF60-218	ENST00000531995	SOCS3	O14543	225 aa		13.75	□□□□□ -0.21
PUF60-218	ENST00000531995	RBMY1D	P0C7P1	496 aa	Known RBP	13.75	□□□□□ -0.21
PUF60-218	ENST00000531995	ZNF124	Q15973	351 aa		13.75	□□□□□ -0.21
PUF60-218	ENST00000531995	OR1L4	Q8NGR5	311 aa		13.75	□□□□□ -0.21
PUF60-218	ENST00000531995	SCGB1C1	Q8TD33	95 aa		13.75	□□□□□ -0.21
PUF60-218	ENST00000531995	MFF	Q9GZY8	342 aa		13.75	□□□□□ -0.21
PUF60-218	ENST00000531995	MAP6D1	Q9H9H5	199 aa		13.75	□□□□□ -0.21
PUF60-218	ENST00000531995	NRN1	Q9NPD7	142 aa		13.75	□□□□□ -0.21
PUF60-218	ENST00000531995	JTB	O76095	146 aa		13.74	□□□□□ -0.21
PUF60-218	ENST00000531995	CXCL2	P19875	107 aa		13.74	□□□□□ -0.21
PUF60-218	ENST00000531995	CD300C	Q08708	224 aa		13.74	□□□□□ -0.21
PUF60-218	ENST00000531995	RPL7L1	Q6DKI1	246 aa	Known RBP	13.74	□□□□□ -0.21
PUF60-218	ENST00000531995	APRG1	Q8IVJ8	170 aa		13.74	□□□□□ -0.21
PUF60-218	ENST00000531995	ZNF709	Q8N972	641 aa		13.74	□□□□□ -0.21
PUF60-218	ENST00000531995	GATAD1	Q8WUU5	269 aa		13.74	□□□□□ -0.21
PUF60-218	ENST00000531995	C17orf112	F2Z3M2	114 aa		13.73	□□□□□ -0.21
PUF60-218	ENST00000531995	SPATA31B1P	Q5VZV4	182 aa		13.73	□□□□□ -0.21
PUF60-218	ENST00000531995	UNQ5830/PRO19650/PRO19816	Q6UY13	95 aa		13.73	□□□□□ -0.21
PUF60-218	ENST00000531995	KCNRG	Q8N5I3	272 aa		13.73	□□□□□ -0.21
PUF60-218	ENST00000531995	PFDN5	Q99471	154 aa		13.73	□□□□□ -0.21
PUF60-218	ENST00000531995	S100A7	P31151	101 aa		13.72	□□□□□ -0.21
PUF60-218	ENST00000531995	DEFB131A	P59861	70 aa		13.72	□□□□□ -0.21
PUF60-218	ENST00000531995	ZNF266	Q14584	549 aa		13.72	□□□□□ -0.21
PUF60-218	ENST00000531995	GPR82	Q96P67	336 aa		13.72	□□□□□ -0.21
PUF60-218	ENST00000531995	SEPSECS	Q9HD40	501 aa	Known RBP	13.72	□□□□□ -0.21
PUF60-218	ENST00000531995	TIMM9	Q9Y5J7	89 aa		13.72	□□□□□ -0.21
PUF60-218	ENST00000531995	ZNF688	P0C7X2	276 aa		13.71	□□□□□ -0.21
PUF60-218	ENST00000531995	ATP6V0C	P27449	155 aa		13.71	□□□□□ -0.21
PUF60-218	ENST00000531995	GALR1	P47211	349 aa		13.71	□□□□□ -0.21
PUF60-218	ENST00000531995	CMC4	P56277	68 aa	Predicted RBP	13.71	□□□□□ -0.21
PUF60-218	ENST00000531995	FFAR4	Q5NUL3	377 aa		13.71	□□□□□ -0.21
PUF60-218	ENST00000531995	MIR17HG	Q75NE6	70 aa		13.71	□□□□□ -0.21
PUF60-218	ENST00000531995	HSD17B11	Q8NBQ5	300 aa		13.71	□□□□□ -0.21
PUF60-218	ENST00000531995	FAM167A-AS1	Q96KT0	104 aa		13.71	□□□□□ -0.21
PUF60-218	ENST00000531995	KCNIP2	Q9NS61	270 aa		13.71	□□□□□ -0.21
PUF60-218	ENST00000531995		A0A087X0K7	114 aa		13.7	□□□□□ -0.22
PUF60-218	ENST00000531995	TRAV8-2	A0A0B4J237	113 aa		13.7	□□□□□ -0.22
PUF60-218	ENST00000531995	RPL7	P18124	248 aa	Known RBP	13.7	□□□□□ -0.22
PUF60-218	ENST00000531995	ZNF345	Q14585	488 aa		13.7	□□□□□ -0.22
PUF60-218	ENST00000531995	S100A7A	Q86SG5	101 aa		13.7	□□□□□ -0.22
PUF60-218	ENST00000531995	SH3BGRL3	Q9H299	93 aa		13.7	□□□□□ -0.22
PUF60-218	ENST00000531995	TAAR5	O14804	337 aa		13.69	□□□□□ -0.22
PUF60-218	ENST00000531995	C1QB	P02746	253 aa		13.69	□□□□□ -0.22
PUF60-218	ENST00000531995	IGLC2	P0DOY2	106 aa		13.69	□□□□□ -0.22
PUF60-218	ENST00000531995	FAM78B	Q5VT40	261 aa		13.69	□□□□□ -0.22
PUF60-218	ENST00000531995	AKAP14	Q86UN6	197 aa		13.69	□□□□□ -0.22
PUF60-218	ENST00000531995	OR2G3	Q8NGZ4	309 aa		13.69	□□□□□ -0.22
PUF60-218	ENST00000531995	C20orf173	Q96LM9	149 aa		13.69	□□□□□ -0.22
PUF60-218	ENST00000531995	SLC25A2	Q9BXI2	301 aa		13.69	□□□□□ -0.22

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