RNA–Protein interactions for RNA: ENST00000526000.5

CD44-221, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 722 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-221ENST00000526000 CAV2P51636 162 aa4.72□□□□□ -1.65
CD44-221ENST00000526000 MORN3Q6PF18 240 aaPredicted RBP4.72□□□□□ -1.65
CD44-221ENST00000526000 TCTE3Q8IZS6 198 aa4.72□□□□□ -1.65
CD44-221ENST00000526000 TMEM252Q8N6L7 170 aa4.72□□□□□ -1.65
CD44-221ENST00000526000 INO80EQ8NBZ0 244 aaPredicted RBP4.72□□□□□ -1.65
CD44-221ENST00000526000 CSNK1G2-AS1Q8NCQ2 148 aa4.72□□□□□ -1.65
CD44-221ENST00000526000 OR1S2Q8NGQ3 325 aa4.72□□□□□ -1.65
CD44-221ENST00000526000 OR2T35Q8NGX2 323 aa4.72□□□□□ -1.65
CD44-221ENST00000526000 TMEM170AQ8WVE7 144 aa4.72□□□□□ -1.65
CD44-221ENST00000526000 NDUFAF3Q9BU61 184 aa4.72□□□□□ -1.65
CD44-221ENST00000526000 HRH4Q9H3N8 390 aa4.72□□□□□ -1.65
CD44-221ENST00000526000 FNDC4Q9H6D8 234 aaPredicted RBP4.72□□□□□ -1.65
CD44-221ENST00000526000 TMEM231Q9H6L2 316 aa4.72□□□□□ -1.65
CD44-221ENST00000526000 PMS2P5A8MQ11 134 aa4.71□□□□□ -1.66
CD44-221ENST00000526000 HMSDA8MTL9 139 aa4.71□□□□□ -1.66
CD44-221ENST00000526000 PRSS46E5RG02 174 aa4.71□□□□□ -1.66
CD44-221ENST00000526000 H0YIZ8 118 aa4.71□□□□□ -1.66
CD44-221ENST00000526000 MPDU1O75352 247 aa4.71□□□□□ -1.66
CD44-221ENST00000526000 CCNKO75909 580 aa4.71□□□□□ -1.66
CD44-221ENST00000526000 NXPH3O95157 252 aa4.71□□□□□ -1.66
CD44-221ENST00000526000 CD5P06127 495 aa4.71□□□□□ -1.66
CD44-221ENST00000526000 P0DMU3 169 aa4.71□□□□□ -1.66
CD44-221ENST00000526000 FAM231AP0DMU4 169 aa4.71□□□□□ -1.66
CD44-221ENST00000526000 FAM231CP0DMU5 169 aa4.71□□□□□ -1.66
CD44-221ENST00000526000 SPP1P10451 314 aa4.71□□□□□ -1.66
CD44-221ENST00000526000 YPEL3P61236 119 aaPredicted RBP4.71□□□□□ -1.66
CD44-221ENST00000526000 SELENOTP62341 195 aa4.71□□□□□ -1.66
CD44-221ENST00000526000 RAB31Q13636 194 aa4.71□□□□□ -1.66
CD44-221ENST00000526000 LRRC37A5PQ49AS3 106 aa4.71□□□□□ -1.66
CD44-221ENST00000526000 TMEM144Q7Z5S9 345 aa4.71□□□□□ -1.66
CD44-221ENST00000526000 S100A7AQ86SG5 101 aa4.71□□□□□ -1.66
CD44-221ENST00000526000 AKAP14Q86UN6 197 aa4.71□□□□□ -1.66
CD44-221ENST00000526000 THAP8Q8NA92 274 aa4.71□□□□□ -1.66
CD44-221ENST00000526000 LINC00052Q96N35 136 aa4.71□□□□□ -1.66
CD44-221ENST00000526000 AQP10Q96PS8 301 aa4.71□□□□□ -1.66
CD44-221ENST00000526000 TRGV9Q99603 122 aa4.71□□□□□ -1.66
CD44-221ENST00000526000 NPVFQ9HCQ7 196 aa4.71□□□□□ -1.66
CD44-221ENST00000526000 MBD2Q9UBB5 411 aa4.71□□□□□ -1.66
CD44-221ENST00000526000 PAIP2BQ9ULR5 123 aaKnown RBP4.71□□□□□ -1.66
CD44-221ENST00000526000 TRAV2A0A0B4J234 112 aa4.7□□□□□ -1.66
CD44-221ENST00000526000 HELTA6NFD8 242 aa4.7□□□□□ -1.66
CD44-221ENST00000526000 FAM24AA6NFZ4 105 aa4.7□□□□□ -1.66
CD44-221ENST00000526000 H3BP45 60 aa4.7□□□□□ -1.66
CD44-221ENST00000526000 TAAR5O14804 337 aa4.7□□□□□ -1.66
CD44-221ENST00000526000 IGKV1-17P01599 117 aa4.7□□□□□ -1.66
CD44-221ENST00000526000 PRM2P04554 102 aa4.7□□□□□ -1.66
CD44-221ENST00000526000 METTL15P1P0C7V9 234 aa4.7□□□□□ -1.66
CD44-221ENST00000526000 SPART-AS1P0CW21 52 aa4.7□□□□□ -1.66
CD44-221ENST00000526000 CRYBB3P26998 211 aa4.7□□□□□ -1.66
CD44-221ENST00000526000 RPL12P30050 165 aaKnown RBP4.7□□□□□ -1.66
CD44-221ENST00000526000 RND2P52198 227 aa4.7□□□□□ -1.66
CD44-221ENST00000526000 AP2S1P53680 142 aaPredicted RBP4.7□□□□□ -1.66
CD44-221ENST00000526000 SLC38A11Q08AI6 406 aa4.7□□□□□ -1.66
CD44-221ENST00000526000 OR2F1Q13607 317 aa4.7□□□□□ -1.66
CD44-221ENST00000526000 GAMTQ14353 236 aa4.7□□□□□ -1.66
CD44-221ENST00000526000 ZNF266Q14584 549 aa4.7□□□□□ -1.66
CD44-221ENST00000526000 ZNF345Q14585 488 aa4.7□□□□□ -1.66
CD44-221ENST00000526000 VWC2Q2TAL6 325 aa4.7□□□□□ -1.66
CD44-221ENST00000526000 PXDC1Q5TGL8 231 aa4.7□□□□□ -1.66
CD44-221ENST00000526000 GDF5OSQ5U4N7 250 aa4.7□□□□□ -1.66
CD44-221ENST00000526000 OR8G2PQ6IF36 304 aa4.7□□□□□ -1.66
CD44-221ENST00000526000 TEPPQ6URK8 271 aa4.7□□□□□ -1.66
CD44-221ENST00000526000 ACOT7LQ6ZUV0 252 aa4.7□□□□□ -1.66
CD44-221ENST00000526000 ZNF546Q86UE3 836 aa4.7□□□□□ -1.66
CD44-221ENST00000526000 DCANP1Q8TF63 244 aa4.7□□□□□ -1.66
CD44-221ENST00000526000 Q8WTZ3 238 aa4.7□□□□□ -1.66
CD44-221ENST00000526000 GRAMD2BQ96HH9 432 aa4.7□□□□□ -1.66
CD44-221ENST00000526000 NARS2Q96I59 477 aaKnown RBP4.7□□□□□ -1.66
CD44-221ENST00000526000 ST6GAL2Q96JF0 529 aa4.7□□□□□ -1.66
CD44-221ENST00000526000 HYLS1Q96M11 299 aa4.7□□□□□ -1.66
CD44-221ENST00000526000 TMEM147Q9BVK8 224 aa4.7□□□□□ -1.66
CD44-221ENST00000526000 PARD6GQ9BYG4 376 aaPredicted RBP4.7□□□□□ -1.66
CD44-221ENST00000526000 KCNIP2Q9NS61 270 aa4.7□□□□□ -1.66
CD44-221ENST00000526000 UQCC1Q9NVA1 299 aa4.7□□□□□ -1.66
CD44-221ENST00000526000 OR5AC2Q9NZP5 309 aa4.7□□□□□ -1.66
CD44-221ENST00000526000 PFDN2Q9UHV9 154 aa4.7□□□□□ -1.66
CD44-221ENST00000526000 TNFSF18Q9UNG2 199 aa4.7□□□□□ -1.66
CD44-221ENST00000526000 RNF24Q9Y225 148 aa4.7□□□□□ -1.66
CD44-221ENST00000526000 HSPB11Q9Y547 144 aa4.7□□□□□ -1.66
CD44-221ENST00000526000 HECTD4Q9Y4D8 3996 aa4.7□□□□□ -1.66
CD44-221ENST00000526000 FXYD6-FXYD2A0A087WZ82 144 aa4.69□□□□□ -1.66
CD44-221ENST00000526000 A0A0D9SG52 128 aa4.69□□□□□ -1.66
CD44-221ENST00000526000 IGSF23A1L1A6 192 aa4.69□□□□□ -1.66
CD44-221ENST00000526000 H3BMM0 161 aa4.69□□□□□ -1.66
CD44-221ENST00000526000 IFNA5P01569 189 aa4.69□□□□□ -1.66
CD44-221ENST00000526000 C1QBP02746 253 aa4.69□□□□□ -1.66
CD44-221ENST00000526000 AMBPP02760 352 aa4.69□□□□□ -1.66
CD44-221ENST00000526000 HNRNPCP07910 306 aaKnown RBP eCLIP4.69□□□□□ -1.66
CD44-221ENST00000526000 IGLC1P0CG04 106 aa4.69□□□□□ -1.66
CD44-221ENST00000526000 OR10J1P30954 320 aa4.69□□□□□ -1.66
CD44-221ENST00000526000 AKR1C1Q04828 323 aa4.69□□□□□ -1.66
CD44-221ENST00000526000 TNP2Q05952 138 aa4.69□□□□□ -1.66
CD44-221ENST00000526000 LGALS9BQ3B8N2 356 aa4.69□□□□□ -1.66
CD44-221ENST00000526000 TMEM41BQ5BJD5 291 aa4.69□□□□□ -1.66
CD44-221ENST00000526000 C1orf134Q5TEV5 83 aa4.69□□□□□ -1.66
CD44-221ENST00000526000 C16orf54Q6UWD8 224 aa4.69□□□□□ -1.66
CD44-221ENST00000526000 OR4B1Q8NGF8 309 aa4.69□□□□□ -1.66
CD44-221ENST00000526000 OR5C1Q8NGR4 320 aa4.69□□□□□ -1.66
CD44-221ENST00000526000 GLMPQ8WWB7 406 aa4.69□□□□□ -1.66
CD44-221ENST00000526000 NPIPB3Q92617 1050 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms