RNA–Protein interactions for RNA: ENST00000519054.5

SKP1-205, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 654 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-205ENST00000519054 SPRR2FQ96RM1 72 aa0.75□□□□□ -2.29
SKP1-205ENST00000519054 C7orf50Q9BRJ6 194 aaKnown RBP0.75□□□□□ -2.29
SKP1-205ENST00000519054 LLPHQ9BRT6 129 aaKnown RBP0.75□□□□□ -2.29
SKP1-205ENST00000519054 MND1Q9BWT6 205 aa0.75□□□□□ -2.29
SKP1-205ENST00000519054 EIF5A2Q9GZV4 153 aaKnown RBP0.75□□□□□ -2.29
SKP1-205ENST00000519054 SLC2A9Q9NRM0 540 aa0.75□□□□□ -2.29
SKP1-205ENST00000519054 PLEKHJ1Q9NW61 149 aa0.75□□□□□ -2.29
SKP1-205ENST00000519054 HDGFL3Q9Y3E1 203 aa0.75□□□□□ -2.29
SKP1-205ENST00000519054 TCHHQ07283 1943 aa0.75□□□□□ -2.29
SKP1-205ENST00000519054 A0A087WUU8 490 aa0.74□□□□□ -2.29
SKP1-205ENST00000519054 GRIFINA4D1Z8 144 aa0.74□□□□□ -2.29
SKP1-205ENST00000519054 OR6C6A6NF89 314 aa0.74□□□□□ -2.29
SKP1-205ENST00000519054 TMEM235A6NFC5 223 aa0.74□□□□□ -2.29
SKP1-205ENST00000519054 PSMG1O95456 288 aa0.74□□□□□ -2.29
SKP1-205ENST00000519054 IFNA10P01566 189 aa0.74□□□□□ -2.29
SKP1-205ENST00000519054 HLA-DRAP01903 254 aa0.74□□□□□ -2.29
SKP1-205ENST00000519054 IL6P05231 212 aa0.74□□□□□ -2.29
SKP1-205ENST00000519054 PET100P0DJ07 73 aa0.74□□□□□ -2.29
SKP1-205ENST00000519054 UGT2B7P16662 529 aa0.74□□□□□ -2.29
SKP1-205ENST00000519054 CD24P25063 80 aa0.74□□□□□ -2.29
SKP1-205ENST00000519054 IFNGR2P38484 337 aa0.74□□□□□ -2.29
SKP1-205ENST00000519054 PRB3Q04118 309 aaPredicted RBP0.74□□□□□ -2.29
SKP1-205ENST00000519054 GNA13Q14344 377 aa0.74□□□□□ -2.29
SKP1-205ENST00000519054 SAPCD1Q5SSQ6 148 aa0.74□□□□□ -2.29
SKP1-205ENST00000519054 AMTNQ6UX39 209 aa0.74□□□□□ -2.29
SKP1-205ENST00000519054 Q6ZTI0 123 aa0.74□□□□□ -2.29
SKP1-205ENST00000519054 GLT6D1Q7Z4J2 308 aa0.74□□□□□ -2.29
SKP1-205ENST00000519054 OOSP2Q86WS3 158 aa0.74□□□□□ -2.29
SKP1-205ENST00000519054 GPHB5Q86YW7 130 aa0.74□□□□□ -2.29
SKP1-205ENST00000519054 LRRC34Q8IZ02 419 aa0.74□□□□□ -2.29
SKP1-205ENST00000519054 DAND5Q8N907 189 aa0.74□□□□□ -2.29
SKP1-205ENST00000519054 RPS4Y2Q8TD47 263 aa0.74□□□□□ -2.29
SKP1-205ENST00000519054 HAVCR2Q8TDQ0 301 aa0.74□□□□□ -2.29
SKP1-205ENST00000519054 CYGBQ8WWM9 190 aa0.74□□□□□ -2.29
SKP1-205ENST00000519054 SFRP2Q96HF1 295 aa0.74□□□□□ -2.29
SKP1-205ENST00000519054 SLC35G5Q96KT7 338 aa0.74□□□□□ -2.29
SKP1-205ENST00000519054 PACRGQ96M98 296 aaPredicted RBP0.74□□□□□ -2.29
SKP1-205ENST00000519054 DERL2Q9GZP9 239 aa0.74□□□□□ -2.29
SKP1-205ENST00000519054 UBAP1Q9NZ09 502 aa0.74□□□□□ -2.29
SKP1-205ENST00000519054 EMC3Q9P0I2 261 aa0.74□□□□□ -2.29
SKP1-205ENST00000519054 SYNE1Q8NF91 8797 aaKnown RBP0.74□□□□□ -2.29
SKP1-205ENST00000519054 A0A1W2PQD3 144 aa0.73□□□□□ -2.29
SKP1-205ENST00000519054 ZNF705FA8MVS1 300 aaPredicted RBP0.73□□□□□ -2.29
SKP1-205ENST00000519054 C9JCJ5 164 aa0.73□□□□□ -2.29
SKP1-205ENST00000519054 GOLGA8KD6RF30 607 aa0.73□□□□□ -2.29
SKP1-205ENST00000519054 MT-CO2P00403 227 aa0.73□□□□□ -2.29
SKP1-205ENST00000519054 IFNA4P05014 189 aa0.73□□□□□ -2.29
SKP1-205ENST00000519054 IFNA16P05015 189 aa0.73□□□□□ -2.29
SKP1-205ENST00000519054 OCMP0CE72 109 aaPredicted RBP0.73□□□□□ -2.29
SKP1-205ENST00000519054 RAP1GDS1P52306 607 aa0.73□□□□□ -2.29
SKP1-205ENST00000519054 CTBP2P56545 445 aa0.73□□□□□ -2.29
SKP1-205ENST00000519054 TMEM33P57088 247 aa0.73□□□□□ -2.29
SKP1-205ENST00000519054 TCTAP57738 103 aa0.73□□□□□ -2.29
SKP1-205ENST00000519054 TAS2R30P59541 319 aa0.73□□□□□ -2.29
SKP1-205ENST00000519054 CXCR4P61073 352 aa0.73□□□□□ -2.29
SKP1-205ENST00000519054 HLA-DRB3P79483 266 aa0.73□□□□□ -2.29
SKP1-205ENST00000519054 EBPQ15125 230 aaKnown RBP0.73□□□□□ -2.29
SKP1-205ENST00000519054 ZNF791Q3KP31 576 aaPredicted RBP0.73□□□□□ -2.29
SKP1-205ENST00000519054 FAM201AQ5SY85 155 aa0.73□□□□□ -2.29
SKP1-205ENST00000519054 PLEKHG7Q6ZR37 379 aa0.73□□□□□ -2.29
SKP1-205ENST00000519054 BAP18Q8IXM2 172 aa0.73□□□□□ -2.29
SKP1-205ENST00000519054 OR4E2Q8NGC2 313 aa0.73□□□□□ -2.29
SKP1-205ENST00000519054 EEF1AKMT1Q8WVE0 214 aa0.73□□□□□ -2.29
SKP1-205ENST00000519054 RAB8BQ92930 207 aa0.73□□□□□ -2.29
SKP1-205ENST00000519054 MS4A6EQ96DS6 147 aa0.73□□□□□ -2.29
SKP1-205ENST00000519054 DCUN1D5Q9BTE7 237 aa0.73□□□□□ -2.29
SKP1-205ENST00000519054 TIPINQ9BVW5 301 aa0.73□□□□□ -2.29
SKP1-205ENST00000519054 TTTY13Q9BZ97 58 aa0.73□□□□□ -2.29
SKP1-205ENST00000519054 POLR3HQ9Y535 204 aaPredicted RBP0.73□□□□□ -2.29
SKP1-205ENST00000519054 TMSB15BA0A087X1C1 80 aa0.72□□□□□ -2.29
SKP1-205ENST00000519054 A8MUN3 132 aa0.72□□□□□ -2.29
SKP1-205ENST00000519054 ATP6V1G2-DDX39BF2Z307 99 aa0.72□□□□□ -2.29
SKP1-205ENST00000519054 STX10O60499 249 aa0.72□□□□□ -2.29
SKP1-205ENST00000519054 REG1AP05451 166 aa0.72□□□□□ -2.29
SKP1-205ENST00000519054 ZNF705DP0CH99 300 aaPredicted RBP0.72□□□□□ -2.29
SKP1-205ENST00000519054 ZNF705BP0CI00 300 aaPredicted RBP0.72□□□□□ -2.29
SKP1-205ENST00000519054 C8orf88P0DMB2 117 aa0.72□□□□□ -2.29
SKP1-205ENST00000519054 COX5BP10606 129 aa0.72□□□□□ -2.29
SKP1-205ENST00000519054 CCL1P22362 96 aa0.72□□□□□ -2.29
SKP1-205ENST00000519054 CD40LGP29965 261 aa0.72□□□□□ -2.29
SKP1-205ENST00000519054 CDK9P50750 372 aaKnown RBP0.72□□□□□ -2.29
SKP1-205ENST00000519054 TFAMQ00059 246 aaKnown RBP0.72□□□□□ -2.29
SKP1-205ENST00000519054 ZNF90Q03938 601 aa0.72□□□□□ -2.29
SKP1-205ENST00000519054 DEFB136Q30KP8 78 aa0.72□□□□□ -2.29
SKP1-205ENST00000519054 UBE2DNLQ8IWF7 75 aa0.72□□□□□ -2.29
SKP1-205ENST00000519054 LRRC25Q8N386 305 aaPredicted RBP0.72□□□□□ -2.29
SKP1-205ENST00000519054 C12orf29Q8N999 325 aa0.72□□□□□ -2.29
SKP1-205ENST00000519054 TMEM161BQ8NDZ6 487 aa0.72□□□□□ -2.29
SKP1-205ENST00000519054 KCTD7Q96MP8 289 aa0.72□□□□□ -2.29
SKP1-205ENST00000519054 TMEM70Q9BUB7 260 aa0.72□□□□□ -2.29
SKP1-205ENST00000519054 TMEM109Q9BVC6 243 aa0.72□□□□□ -2.29
SKP1-205ENST00000519054 COQ4Q9Y3A0 265 aa0.72□□□□□ -2.29
SKP1-205ENST00000519054 RBM7Q9Y580 266 aaKnown RBP0.72□□□□□ -2.29
SKP1-205ENST00000519054 UQCRHLA0A096LP55 91 aa0.71□□□□□ -2.3
SKP1-205ENST00000519054 C1orf232A0A0U1RR37 186 aa0.71□□□□□ -2.3
SKP1-205ENST00000519054 C5orf49A4QMS7 147 aa0.71□□□□□ -2.3
SKP1-205ENST00000519054 BHLHE40O14503 412 aa0.71□□□□□ -2.3
SKP1-205ENST00000519054 SLC16A4O15374 487 aa0.71□□□□□ -2.3
SKP1-205ENST00000519054 OR2J2O76002 312 aa0.71□□□□□ -2.3
SKP1-205ENST00000519054 APOMO95445 188 aa0.71□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms