RNA–Protein interactions for RNA: ENST00000517138.1

SCARNA1-201, small Cajal body-specific RNA 1, humanhuman

BASIC

Gene SCARNA1, Length 166 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA1-201ENST00000517138 TNFAIP6P98066 277 aaPredicted RBP0.03□□□□□ -2.4
SCARNA1-201ENST00000517138 PMS2P3Q13401 168 aa0.03□□□□□ -2.4
SCARNA1-201ENST00000517138 C1orf194Q5T5A4 169 aa0.03□□□□□ -2.4
SCARNA1-201ENST00000517138 AADACL4Q5VUY2 407 aa0.03□□□□□ -2.4
SCARNA1-201ENST00000517138 LINC00526Q96FQ7 95 aa0.03□□□□□ -2.4
SCARNA1-201ENST00000517138 UBR2Q8IWV8 1755 aa0.03□□□□□ -2.4
SCARNA1-201ENST00000517138 CDK5RAP2Q96SN8 1893 aa0.03□□□□□ -2.41
SCARNA1-201ENST00000517138 ZFYVE9O95405 1425 aa0.03□□□□□ -2.41
SCARNA1-201ENST00000517138 DCCP43146 1447 aa0.03□□□□□ -2.41
SCARNA1-201ENST00000517138 ANKRD50Q9ULJ7 1429 aa0.03□□□□□ -2.41
SCARNA1-201ENST00000517138 CRYBG1Q9Y4K1 1723 aa0.02□□□□□ -2.41
SCARNA1-201ENST00000517138 C21orf140B9A014 251 aa0.02□□□□□ -2.41
SCARNA1-201ENST00000517138 NDUFS6O75380 124 aaKnown RBP0.02□□□□□ -2.41
SCARNA1-201ENST00000517138 REG1AP05451 166 aa0.02□□□□□ -2.41
SCARNA1-201ENST00000517138 KRT7P08729 469 aa0.02□□□□□ -2.41
SCARNA1-201ENST00000517138 METTL15P1P0C7V9 234 aa0.02□□□□□ -2.41
SCARNA1-201ENST00000517138 EIF2B2P49770 351 aaKnown RBP0.02□□□□□ -2.41
SCARNA1-201ENST00000517138 DNM1P34Q6PK57 102 aa0.02□□□□□ -2.41
SCARNA1-201ENST00000517138 C3orf56Q8N813 242 aa0.02□□□□□ -2.41
SCARNA1-201ENST00000517138 PAQR5Q9NXK6 330 aaPredicted RBP0.02□□□□□ -2.41
SCARNA1-201ENST00000517138 CASKIN1Q8WXD9 1431 aa0.02□□□□□ -2.41
SCARNA1-201ENST00000517138 FYCO1Q9BQS8 1478 aa0.02□□□□□ -2.41
SCARNA1-201ENST00000517138 PARP14Q460N5 1801 aa0.01□□□□□ -2.41
SCARNA1-201ENST00000517138 OBSL1O75147 1896 aa0.01□□□□□ -2.41
SCARNA1-201ENST00000517138 F8VZ95 297 aa0.01□□□□□ -2.41
SCARNA1-201ENST00000517138 OR2T1O43869 369 aa0.01□□□□□ -2.41
SCARNA1-201ENST00000517138 NEMFO60524 1076 aa0.01□□□□□ -2.41
SCARNA1-201ENST00000517138 MT1HL1P0DM35 61 aa0.01□□□□□ -2.41
SCARNA1-201ENST00000517138 OR4D2P58180 307 aa0.01□□□□□ -2.41
SCARNA1-201ENST00000517138 SPCS2Q15005 226 aa0.01□□□□□ -2.41
SCARNA1-201ENST00000517138 KISS1Q15726 138 aa0.01□□□□□ -2.41
SCARNA1-201ENST00000517138 FAM19A5Q7Z5A7 132 aaPredicted RBP0.01□□□□□ -2.41
SCARNA1-201ENST00000517138 C10orf95Q9H7T3 257 aa0.01□□□□□ -2.41
SCARNA1-201ENST00000517138 FHAD1B1AJZ9 1412 aa0.01□□□□□ -2.41
SCARNA1-201ENST00000517138 SYCP2Q9BX26 1530 aa0.01□□□□□ -2.41
SCARNA1-201ENST00000517138 ZNF879B4DU55 563 aa0□□□□□ -2.41
SCARNA1-201ENST00000517138 ZNF75CPQ92670 426 aaPredicted RBP0□□□□□ -2.41
SCARNA1-201ENST00000517138 PACRGQ96M98 296 aaPredicted RBP0□□□□□ -2.41
SCARNA1-201ENST00000517138 TREM1Q9NP99 234 aa0□□□□□ -2.41
SCARNA1-201ENST00000517138 FUT9Q9Y231 359 aa0□□□□□ -2.41
SCARNA1-201ENST00000517138 ANKRD30AQ9BXX3 1397 aa-0.01□□□□□ -2.41
SCARNA1-201ENST00000517138 IGKV1D-42A0A075B6H8 117 aa-0.01□□□□□ -2.41
SCARNA1-201ENST00000517138 FADS1O60427 444 aa-0.01□□□□□ -2.41
SCARNA1-201ENST00000517138 TPM1P09493 284 aa-0.01□□□□□ -2.41
SCARNA1-201ENST00000517138 RBM3P98179 157 aaKnown RBP-0.01□□□□□ -2.41
SCARNA1-201ENST00000517138 KRTAP19-2Q3LHN2 52 aa-0.01□□□□□ -2.41
SCARNA1-201ENST00000517138 LCN15Q6UWW0 184 aa-0.01□□□□□ -2.41
SCARNA1-201ENST00000517138 Q8N814 137 aa-0.01□□□□□ -2.41
SCARNA1-201ENST00000517138 HS3ST2Q9Y278 367 aa-0.01□□□□□ -2.41
SCARNA1-201ENST00000517138 PXMP4Q9Y6I8 212 aa-0.01□□□□□ -2.41
SCARNA1-201ENST00000517138 ARFGEF2Q9Y6D5 1785 aa-0.01□□□□□ -2.41
SCARNA1-201ENST00000517138 RIC1Q4ADV7 1423 aa-0.02□□□□□ -2.41
SCARNA1-201ENST00000517138 HELZP42694 1942 aaKnown RBP-0.02□□□□□ -2.41
SCARNA1-201ENST00000517138 LY6G6CO95867 125 aa-0.02□□□□□ -2.41
SCARNA1-201ENST00000517138 HLA-DRAP01903 254 aa-0.02□□□□□ -2.41
SCARNA1-201ENST00000517138 RPS4Y1P22090 263 aaKnown RBP-0.02□□□□□ -2.41
SCARNA1-201ENST00000517138 BRS3P32247 399 aa-0.02□□□□□ -2.41
SCARNA1-201ENST00000517138 ZNF80P51504 273 aaPredicted RBP-0.02□□□□□ -2.41
SCARNA1-201ENST00000517138 ZNF550Q7Z398 422 aa-0.02□□□□□ -2.41
SCARNA1-201ENST00000517138 CD302Q8IX05 232 aa-0.02□□□□□ -2.41
SCARNA1-201ENST00000517138 C1orf158Q8N1D5 194 aa-0.02□□□□□ -2.41
SCARNA1-201ENST00000517138 MYO5AQ9Y4I1 1855 aaKnown RBP-0.02□□□□□ -2.41
SCARNA1-201ENST00000517138 COX6B1P14854 86 aa-0.03□□□□□ -2.41
SCARNA1-201ENST00000517138 NFYAP23511 347 aaPredicted RBP-0.03□□□□□ -2.41
SCARNA1-201ENST00000517138 FKBP2P26885 142 aaKnown RBP-0.03□□□□□ -2.41
SCARNA1-201ENST00000517138 POLR2GP62487 172 aaKnown RBP eCLIP-0.03□□□□□ -2.41
SCARNA1-201ENST00000517138 RPL18Q07020 188 aaKnown RBP-0.03□□□□□ -2.41
SCARNA1-201ENST00000517138 AAED1Q7RTV5 226 aa-0.03□□□□□ -2.41
SCARNA1-201ENST00000517138 ZNF418Q8TF45 676 aaPredicted RBP-0.03□□□□□ -2.41
SCARNA1-201ENST00000517138 C19orf60Q96EN9 201 aa-0.03□□□□□ -2.41
SCARNA1-201ENST00000517138 AMELYQ99218 206 aa-0.03□□□□□ -2.41
SCARNA1-201ENST00000517138 OR52A5Q9H2C5 316 aa-0.03□□□□□ -2.41
SCARNA1-201ENST00000517138 WDR54Q9H977 334 aa-0.03□□□□□ -2.41
SCARNA1-201ENST00000517138 RSL24D1Q9UHA3 163 aaKnown RBP-0.03□□□□□ -2.41
SCARNA1-201ENST00000517138 AK3Q9UIJ7 227 aa-0.03□□□□□ -2.41
SCARNA1-201ENST00000517138 KLK9Q9UKQ9 250 aa-0.03□□□□□ -2.41
SCARNA1-201ENST00000517138 ANKRD31Q8N7Z5 1873 aa-0.03□□□□□ -2.41
SCARNA1-201ENST00000517138 KIF1BO60333 1816 aa-0.03□□□□□ -2.42
SCARNA1-201ENST00000517138 PIK3C2GO75747 1445 aa-0.04□□□□□ -2.42
SCARNA1-201ENST00000517138 SCAPERQ9BY12 1400 aa-0.04□□□□□ -2.42
SCARNA1-201ENST00000517138 C1orf232A0A0U1RR37 186 aa-0.04□□□□□ -2.42
SCARNA1-201ENST00000517138 C2orf70A6NJV1 201 aa-0.04□□□□□ -2.42
SCARNA1-201ENST00000517138 K7EIL1 84 aa-0.04□□□□□ -2.42
SCARNA1-201ENST00000517138 YEATS4O95619 227 aa-0.04□□□□□ -2.42
SCARNA1-201ENST00000517138 ASAH2BP0C7U1 165 aa-0.04□□□□□ -2.42
SCARNA1-201ENST00000517138 DDTP30046 118 aa-0.04□□□□□ -2.42
SCARNA1-201ENST00000517138 FAM78BQ5VT40 261 aa-0.04□□□□□ -2.42
SCARNA1-201ENST00000517138 C5orf46Q6UWT4 87 aa-0.04□□□□□ -2.42
SCARNA1-201ENST00000517138 SLC50A1Q9BRV3 221 aa-0.04□□□□□ -2.42
SCARNA1-201ENST00000517138 MED29Q9NX70 200 aa-0.04□□□□□ -2.42
SCARNA1-201ENST00000517138 CHMP5Q9NZZ3 219 aa-0.04□□□□□ -2.42
SCARNA1-201ENST00000517138 PLXNB2O15031 1838 aa-0.04□□□□□ -2.42
SCARNA1-201ENST00000517138 RGPD2P0DJD1 1756 aa-0.04□□□□□ -2.42
SCARNA1-201ENST00000517138 TMEM2Q9UHN6 1383 aa-0.05□□□□□ -2.42
SCARNA1-201ENST00000517138 KIAA1549LQ6ZVL6 1849 aa-0.05□□□□□ -2.42
SCARNA1-201ENST00000517138 IGHV1-69-2A0A0G2JMI3 117 aa-0.05□□□□□ -2.42
SCARNA1-201ENST00000517138 TLCD2A6NGC4 264 aa-0.05□□□□□ -2.42
SCARNA1-201ENST00000517138 OR4C45A6NMZ5 311 aa-0.05□□□□□ -2.42
SCARNA1-201ENST00000517138 FAM228BP0C875 321 aa-0.05□□□□□ -2.42
SCARNA1-201ENST00000517138 PET100P0DJ07 73 aa-0.05□□□□□ -2.42
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms