RNA–Protein interactions for RNA: ENST00000486023.1

COL6A1-204, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 2

Gene COL6A1, Length 968 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-204ENST00000486023 SLC45A2Q9UMX9 530 aa12.81□□□□□ -0.36
COL6A1-204ENST00000486023 X6R8D5 127 aa12.81□□□□□ -0.36
COL6A1-204ENST00000486023 ALMS1Q8TCU4 4167 aa12.81□□□□□ -0.36
COL6A1-204ENST00000486023 HYDINQ4G0P3 5121 aa12.8□□□□□ -0.36
COL6A1-204ENST00000486023 FAM24AA6NFZ4 105 aa12.8□□□□□ -0.36
COL6A1-204ENST00000486023 ISLRO14498 428 aa12.8□□□□□ -0.36
COL6A1-204ENST00000486023 GOSR2O14653 212 aa12.8□□□□□ -0.36
COL6A1-204ENST00000486023 MIFP14174 115 aa12.8□□□□□ -0.36
COL6A1-204ENST00000486023 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.8□□□□□ -0.36
COL6A1-204ENST00000486023 FOXI2Q6ZQN5 318 aa12.8□□□□□ -0.36
COL6A1-204ENST00000486023 LINC00299Q6ZSB3 139 aa12.8□□□□□ -0.36
COL6A1-204ENST00000486023 CSNK1G2-AS1Q8NCQ2 148 aa12.8□□□□□ -0.36
COL6A1-204ENST00000486023 RPRMQ9NS64 109 aa12.8□□□□□ -0.36
COL6A1-204ENST00000486023 ZNF705EA8MWA4 302 aaPredicted RBP12.79□□□□□ -0.36
COL6A1-204ENST00000486023 PVALBP20472 110 aaPredicted RBP12.79□□□□□ -0.36
COL6A1-204ENST00000486023 MEOX2P50222 304 aa12.79□□□□□ -0.36
COL6A1-204ENST00000486023 SELENOTP62341 195 aa12.79□□□□□ -0.36
COL6A1-204ENST00000486023 ASAH1Q13510 395 aa12.79□□□□□ -0.36
COL6A1-204ENST00000486023 FAM78BQ5VT40 261 aa12.79□□□□□ -0.36
COL6A1-204ENST00000486023 LRRC20Q8TCA0 184 aa12.79□□□□□ -0.36
COL6A1-204ENST00000486023 SHANK2-AS3Q9BTD1 123 aa12.79□□□□□ -0.36
COL6A1-204ENST00000486023 SLC35B3Q9H1N7 401 aa12.79□□□□□ -0.36
COL6A1-204ENST00000486023 H3BRN7 92 aa12.78□□□□□ -0.36
COL6A1-204ENST00000486023 AGPAT2O15120 278 aa12.78□□□□□ -0.36
COL6A1-204ENST00000486023 DEDDO75618 318 aa12.78□□□□□ -0.36
COL6A1-204ENST00000486023 UPK1BO75841 260 aa12.78□□□□□ -0.36
COL6A1-204ENST00000486023 SNRPCP09234 159 aaKnown RBP12.78□□□□□ -0.36
COL6A1-204ENST00000486023 PRB4P10163 310 aaPredicted RBP12.78□□□□□ -0.36
COL6A1-204ENST00000486023 EMP1P54849 157 aa12.78□□□□□ -0.36
COL6A1-204ENST00000486023 ZNF767PQ75MW2 155 aa12.78□□□□□ -0.36
COL6A1-204ENST00000486023 RNF182Q8N6D2 247 aa12.78□□□□□ -0.36
COL6A1-204ENST00000486023 LINC00476Q8WZB0 136 aa12.78□□□□□ -0.36
COL6A1-204ENST00000486023 C17orf77Q96MU5 243 aa12.78□□□□□ -0.36
COL6A1-204ENST00000486023 GPR82Q96P67 336 aa12.78□□□□□ -0.36
COL6A1-204ENST00000486023 ELOA3CA0A087WX78 387 aaPredicted RBP12.77□□□□□ -0.37
COL6A1-204ENST00000486023 SIX6O95475 246 aa12.77□□□□□ -0.37
COL6A1-204ENST00000486023 ZNF705DP0CH99 300 aaPredicted RBP12.77□□□□□ -0.37
COL6A1-204ENST00000486023 ZNF705BP0CI00 300 aaPredicted RBP12.77□□□□□ -0.37
COL6A1-204ENST00000486023 HLA-DMBP28068 263 aa12.77□□□□□ -0.37
COL6A1-204ENST00000486023 PSG9Q00887 426 aa12.77□□□□□ -0.37
COL6A1-204ENST00000486023 RAB32Q13637 225 aa12.77□□□□□ -0.37
COL6A1-204ENST00000486023 SAMD13Q5VXD3 122 aa12.77□□□□□ -0.37
COL6A1-204ENST00000486023 PATE2Q6UY27 113 aa12.77□□□□□ -0.37
COL6A1-204ENST00000486023 ARV1Q9H2C2 271 aa12.77□□□□□ -0.37
COL6A1-204ENST00000486023 PTTG2Q9NZH5 202 aa12.77□□□□□ -0.37
COL6A1-204ENST00000486023 IGLL5B9A064 214 aa12.76□□□□□ -0.37
COL6A1-204ENST00000486023 FNDC10F2Z333 226 aa12.76□□□□□ -0.37
COL6A1-204ENST00000486023 COX7A2P2O60397 106 aa12.76□□□□□ -0.37
COL6A1-204ENST00000486023 RPL7P18124 248 aaKnown RBP12.76□□□□□ -0.37
COL6A1-204ENST00000486023 S100A7AQ86SG5 101 aa12.76□□□□□ -0.37
COL6A1-204ENST00000486023 ZNF546Q86UE3 836 aa12.76□□□□□ -0.37
COL6A1-204ENST00000486023 MGST2Q99735 147 aa12.76□□□□□ -0.37
COL6A1-204ENST00000486023 GGACTQ9BVM4 153 aa12.76□□□□□ -0.37
COL6A1-204ENST00000486023 GPN1Q9HCN4 374 aaPredicted RBP12.76□□□□□ -0.37
COL6A1-204ENST00000486023 TRAV8-2A0A0B4J237 113 aa12.75□□□□□ -0.37
COL6A1-204ENST00000486023 A0A0J9YX75 114 aa12.75□□□□□ -0.37
COL6A1-204ENST00000486023 CAMLGP49069 296 aa12.75□□□□□ -0.37
COL6A1-204ENST00000486023 IFITM3Q01628 133 aa12.75□□□□□ -0.37
COL6A1-204ENST00000486023 LINC00305Q7Z4B0 112 aa12.75□□□□□ -0.37
COL6A1-204ENST00000486023 NRARPQ7Z6K4 114 aa12.75□□□□□ -0.37
COL6A1-204ENST00000486023 ZNF738Q8NE65 137 aa12.75□□□□□ -0.37
COL6A1-204ENST00000486023 C2CD4CQ8TF44 421 aa12.75□□□□□ -0.37
COL6A1-204ENST00000486023 PLP1P60201 277 aa12.74□□□□□ -0.37
COL6A1-204ENST00000486023 RAB31Q13636 194 aa12.74□□□□□ -0.37
COL6A1-204ENST00000486023 SPATA31B1PQ5VZV4 182 aa12.74□□□□□ -0.37
COL6A1-204ENST00000486023 Q6ZTC4 211 aa12.74□□□□□ -0.37
COL6A1-204ENST00000486023 ZNF709Q8N972 641 aa12.74□□□□□ -0.37
COL6A1-204ENST00000486023 UQCC1Q9NVA1 299 aa12.74□□□□□ -0.37
COL6A1-204ENST00000486023 CELA1Q9UNI1 258 aa12.74□□□□□ -0.37
COL6A1-204ENST00000486023 UBE2L5PA0A1B0GUS4 154 aa12.73□□□□□ -0.37
COL6A1-204ENST00000486023 IGSF23A1L1A6 192 aa12.73□□□□□ -0.37
COL6A1-204ENST00000486023 INMT-MINDY4F8WBC2 141 aa12.73□□□□□ -0.37
COL6A1-204ENST00000486023 H3BTX0 84 aa12.73□□□□□ -0.37
COL6A1-204ENST00000486023 BAXQ07812 192 aa12.73□□□□□ -0.37
COL6A1-204ENST00000486023 LRRC37A5PQ49AS3 106 aa12.73□□□□□ -0.37
COL6A1-204ENST00000486023 MIC13Q5XKP0 118 aa12.73□□□□□ -0.37
COL6A1-204ENST00000486023 Q6ZRG5 221 aa12.73□□□□□ -0.37
COL6A1-204ENST00000486023 STX12Q86Y82 276 aa12.73□□□□□ -0.37
COL6A1-204ENST00000486023 TMEM252Q8N6L7 170 aa12.73□□□□□ -0.37
COL6A1-204ENST00000486023 TMEM208Q9BTX3 173 aa12.73□□□□□ -0.37
COL6A1-204ENST00000486023 SULT1A1P50225 295 aa12.72□□□□□ -0.37
COL6A1-204ENST00000486023 CNN1P51911 297 aaKnown RBP12.72□□□□□ -0.37
COL6A1-204ENST00000486023 RHOBP62745 196 aa12.72□□□□□ -0.37
COL6A1-204ENST00000486023 C10orf113Q5VZT2 155 aa12.72□□□□□ -0.37
COL6A1-204ENST00000486023 TMEM37Q8WXS4 190 aa12.72□□□□□ -0.37
COL6A1-204ENST00000486023 HRH4Q9H3N8 390 aa12.72□□□□□ -0.37
COL6A1-204ENST00000486023 C11orf1Q9H5F2 150 aa12.72□□□□□ -0.37
COL6A1-204ENST00000486023 LYRM2Q9NU23 88 aaPredicted RBP12.72□□□□□ -0.37
COL6A1-204ENST00000486023 PPP1R14DQ9NXH3 145 aa12.72□□□□□ -0.37
COL6A1-204ENST00000486023 GOLT1BQ9Y3E0 138 aa12.72□□□□□ -0.37
COL6A1-204ENST00000486023 DUSP14O95147 198 aaKnown RBP12.71□□□□□ -0.37
COL6A1-204ENST00000486023 S100A11P31949 105 aa12.71□□□□□ -0.37
COL6A1-204ENST00000486023 HIST1H1AQ02539 215 aaPredicted RBP12.71□□□□□ -0.37
COL6A1-204ENST00000486023 IL15RAQ13261 267 aa12.71□□□□□ -0.37
COL6A1-204ENST00000486023 SPINK13Q1W4C9 94 aa12.71□□□□□ -0.37
COL6A1-204ENST00000486023 PXDC1Q5TGL8 231 aa12.71□□□□□ -0.37
COL6A1-204ENST00000486023 TRAV10A0A0B4J240 114 aa12.7□□□□□ -0.38
COL6A1-204ENST00000486023 TRAV5A0A0B4J249 113 aa12.7□□□□□ -0.38
COL6A1-204ENST00000486023 C11orf94C9JXX5 98 aa12.7□□□□□ -0.38
COL6A1-204ENST00000486023 M0R2Z0 102 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 99.8 ms