RNA–Protein interactions for RNA: ENST00000482558.5

SNX13-208, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 1,139 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-208ENST00000482558 C11orf71Q6IPW1 123 aa6.1□□□□□ -1.43
SNX13-208ENST00000482558 ZNF562Q6V9R5 426 aa6.1□□□□□ -1.43
SNX13-208ENST00000482558 KLHDC1Q8N7A1 406 aa6.1□□□□□ -1.43
SNX13-208ENST00000482558 OR10G8Q8NGN5 311 aa6.1□□□□□ -1.43
SNX13-208ENST00000482558 SIGLEC9Q9Y336 463 aa6.1□□□□□ -1.43
SNX13-208ENST00000482558 MINOS1-NBL1R4GNA1 71 aa6.1□□□□□ -1.43
SNX13-208ENST00000482558 ARFGEF3Q5TH69 2177 aa6.1□□□□□ -1.43
SNX13-208ENST00000482558 A0A1W2PPI3 338 aa6.09□□□□□ -1.43
SNX13-208ENST00000482558 IGLC7A0M8Q6 106 aa6.09□□□□□ -1.43
SNX13-208ENST00000482558 TRGC1P0CF51 173 aa6.09□□□□□ -1.43
SNX13-208ENST00000482558 NPPCP23582 126 aa6.09□□□□□ -1.43
SNX13-208ENST00000482558 RPL13AP40429 203 aaKnown RBP6.09□□□□□ -1.43
SNX13-208ENST00000482558 GNG4P50150 75 aa6.09□□□□□ -1.43
SNX13-208ENST00000482558 KLF5Q13887 457 aaPredicted RBP6.09□□□□□ -1.43
SNX13-208ENST00000482558 TNXAQ16473 311 aa6.09□□□□□ -1.43
SNX13-208ENST00000482558 TPTE2P1Q5T6R2 138 aa6.09□□□□□ -1.43
SNX13-208ENST00000482558 MIR17HGQ75NE6 70 aa6.09□□□□□ -1.43
SNX13-208ENST00000482558 NPBQ8NG41 125 aa6.09□□□□□ -1.43
SNX13-208ENST00000482558 OR10W1Q8NGF6 305 aa6.09□□□□□ -1.43
SNX13-208ENST00000482558 PRORYQ9H606 182 aa6.09□□□□□ -1.43
SNX13-208ENST00000482558 OSTCQ9NRP0 149 aa6.09□□□□□ -1.43
SNX13-208ENST00000482558 YTHDF2Q9Y5A9 579 aaKnown RBP6.09□□□□□ -1.43
SNX13-208ENST00000482558 F11RQ9Y624 299 aaKnown RBP6.09□□□□□ -1.43
SNX13-208ENST00000482558 TLN1Q9Y490 2541 aaKnown RBP6.09□□□□□ -1.43
SNX13-208ENST00000482558 ANKHD1Q8IWZ3 2542 aaKnown RBP6.08□□□□□ -1.44
SNX13-208ENST00000482558 AKAP13Q12802 2813 aa6.08□□□□□ -1.44
SNX13-208ENST00000482558 DMXL1Q9Y485 3027 aa6.08□□□□□ -1.44
SNX13-208ENST00000482558 IGKV1OR2-108A0A075B7D4 117 aa6.08□□□□□ -1.44
SNX13-208ENST00000482558 TRAV30A0A087WSZ9 112 aa6.08□□□□□ -1.44
SNX13-208ENST00000482558 PSMB11A5LHX3 300 aa6.08□□□□□ -1.44
SNX13-208ENST00000482558 ISLRO14498 428 aa6.08□□□□□ -1.44
SNX13-208ENST00000482558 PHOX2AO14813 284 aa6.08□□□□□ -1.44
SNX13-208ENST00000482558 HYPMO75409 117 aa6.08□□□□□ -1.44
SNX13-208ENST00000482558 MOSP00540 346 aa6.08□□□□□ -1.44
SNX13-208ENST00000482558 MT-ND6P03923 174 aa6.08□□□□□ -1.44
SNX13-208ENST00000482558 IGF1P05019 195 aa6.08□□□□□ -1.44
SNX13-208ENST00000482558 MYOD1P15172 320 aa6.08□□□□□ -1.44
SNX13-208ENST00000482558 UBE2L3P68036 154 aaKnown RBP6.08□□□□□ -1.44
SNX13-208ENST00000482558 PLGLAQ15195 96 aa6.08□□□□□ -1.44
SNX13-208ENST00000482558 ACTL10Q5JWF8 245 aa6.08□□□□□ -1.44
SNX13-208ENST00000482558 PRIMA1Q86XR5 153 aa6.08□□□□□ -1.44
SNX13-208ENST00000482558 TMEM183AQ8IXX5 376 aa6.08□□□□□ -1.44
SNX13-208ENST00000482558 OR4X1Q8NH49 305 aa6.08□□□□□ -1.44
SNX13-208ENST00000482558 SGMS2Q8NHU3 365 aa6.08□□□□□ -1.44
SNX13-208ENST00000482558 FRZBQ92765 325 aa6.08□□□□□ -1.44
SNX13-208ENST00000482558 PAXXQ9BUH6 204 aa6.08□□□□□ -1.44
SNX13-208ENST00000482558 OR51M1Q9H341 326 aa6.08□□□□□ -1.44
SNX13-208ENST00000482558 TNFRSF19Q9NS68 423 aa6.08□□□□□ -1.44
SNX13-208ENST00000482558 CLEC5AQ9NY25 188 aa6.08□□□□□ -1.44
SNX13-208ENST00000482558 IL36BQ9NZH7 164 aa6.08□□□□□ -1.44
SNX13-208ENST00000482558 ZNRD1Q9P1U0 126 aa6.08□□□□□ -1.44
SNX13-208ENST00000482558 PCNX1Q96RV3 2341 aa6.08□□□□□ -1.44
SNX13-208ENST00000482558 CEP295Q9C0D2 2601 aa6.07□□□□□ -1.44
SNX13-208ENST00000482558 ZFHX4Q86UP3 3567 aa6.07□□□□□ -1.44
SNX13-208ENST00000482558 ODF3BA8MYP8 253 aa6.07□□□□□ -1.44
SNX13-208ENST00000482558 TIMM23O14925 209 aa6.07□□□□□ -1.44
SNX13-208ENST00000482558 NDUFA3O95167 84 aa6.07□□□□□ -1.44
SNX13-208ENST00000482558 GCGP01275 180 aa6.07□□□□□ -1.44
SNX13-208ENST00000482558 PDLIM4P50479 330 aa6.07□□□□□ -1.44
SNX13-208ENST00000482558 YPEL3P61236 119 aaPredicted RBP6.07□□□□□ -1.44
SNX13-208ENST00000482558 DIAPH2-AS1Q14236 149 aa6.07□□□□□ -1.44
SNX13-208ENST00000482558 RPEL1Q2QD12 228 aa6.07□□□□□ -1.44
SNX13-208ENST00000482558 SPATA31B1PQ5VZV4 182 aa6.07□□□□□ -1.44
SNX13-208ENST00000482558 RASL11AQ6T310 242 aa6.07□□□□□ -1.44
SNX13-208ENST00000482558 HIST3H2BBQ8N257 126 aa6.07□□□□□ -1.44
SNX13-208ENST00000482558 OR2T6Q8NHC8 308 aa6.07□□□□□ -1.44
SNX13-208ENST00000482558 SRSF12Q8WXF0 261 aaKnown RBP6.07□□□□□ -1.44
SNX13-208ENST00000482558 FAM167A-AS1Q96KT0 104 aa6.07□□□□□ -1.44
SNX13-208ENST00000482558 BBC3Q96PG8 261 aaPredicted RBP6.07□□□□□ -1.44
SNX13-208ENST00000482558 SLC25A2Q9BXI2 301 aa6.07□□□□□ -1.44
SNX13-208ENST00000482558 THYN1Q9P016 225 aa6.07□□□□□ -1.44
SNX13-208ENST00000482558 TMEM14CQ9P0S9 112 aa6.07□□□□□ -1.44
SNX13-208ENST00000482558 TBL2Q9Y4P3 447 aaKnown RBP6.07□□□□□ -1.44
SNX13-208ENST00000482558 SPTA1P02549 2419 aa6.07□□□□□ -1.44
SNX13-208ENST00000482558 TNCP24821 2201 aa6.06□□□□□ -1.44
SNX13-208ENST00000482558 CELSR3Q9NYQ7 3312 aa6.06□□□□□ -1.44
SNX13-208ENST00000482558 LOC400499M0QZD8 3231 aa6.06□□□□□ -1.44
SNX13-208ENST00000482558 IGKV1D-37A0A075B6S9 117 aa6.06□□□□□ -1.44
SNX13-208ENST00000482558 FOXH1O75593 365 aa6.06□□□□□ -1.44
SNX13-208ENST00000482558 CNIH1O95406 144 aa6.06□□□□□ -1.44
SNX13-208ENST00000482558 DEFA4P12838 97 aa6.06□□□□□ -1.44
SNX13-208ENST00000482558 COX7A1P24310 79 aa6.06□□□□□ -1.44
SNX13-208ENST00000482558 EFNA4P52798 201 aa6.06□□□□□ -1.44
SNX13-208ENST00000482558 ATP5J2P56134 94 aa6.06□□□□□ -1.44
SNX13-208ENST00000482558 KRTAP10-11P60412 298 aa6.06□□□□□ -1.44
SNX13-208ENST00000482558 ERVFC1-1P60608 527 aa6.06□□□□□ -1.44
SNX13-208ENST00000482558 ZNF90Q03938 601 aa6.06□□□□□ -1.44
SNX13-208ENST00000482558 MRGPRG-AS1Q2M3A8 158 aa6.06□□□□□ -1.44
SNX13-208ENST00000482558 FAM231DQ6ZW35 169 aa6.06□□□□□ -1.44
SNX13-208ENST00000482558 LINC00305Q7Z4B0 112 aa6.06□□□□□ -1.44
SNX13-208ENST00000482558 NECAP1Q8NC96 275 aa6.06□□□□□ -1.44
SNX13-208ENST00000482558 OR5T1Q8NG75 326 aa6.06□□□□□ -1.44
SNX13-208ENST00000482558 FNDC4Q9H6D8 234 aaPredicted RBP6.06□□□□□ -1.44
SNX13-208ENST00000482558 ZNF355PQ9NSJ1 428 aa6.06□□□□□ -1.44
SNX13-208ENST00000482558 TRAPPC1Q9Y5R8 145 aa6.06□□□□□ -1.44
SNX13-208ENST00000482558 DSPP15924 2871 aaKnown RBP6.06□□□□□ -1.44
SNX13-208ENST00000482558 FRYQ5TBA9 3013 aa6.06□□□□□ -1.44
SNX13-208ENST00000482558 ROS1P08922 2347 aa6.05□□□□□ -1.44
SNX13-208ENST00000482558 PIEZO2Q9H5I5 2752 aa6.05□□□□□ -1.44
SNX13-208ENST00000482558 TRBV20OR9-2A0A075B6H5 130 aa6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms