RNA–Protein interactions for RNA: ENST00000468267.1

SSBP1-207, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 800 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-207ENST00000468267 LINC00869P0C866 280 aa12.38□□□□□ -0.43
SSBP1-207ENST00000468267 VAMP2P63027 116 aa12.38□□□□□ -0.43
SSBP1-207ENST00000468267 SPATA31B1PQ5VZV4 182 aa12.38□□□□□ -0.43
SSBP1-207ENST00000468267 TEPPQ6URK8 271 aa12.38□□□□□ -0.43
SSBP1-207ENST00000468267 LINC00476Q8WZB0 136 aa12.38□□□□□ -0.43
SSBP1-207ENST00000468267 C16orf92Q96LL3 132 aa12.38□□□□□ -0.43
SSBP1-207ENST00000468267 C2orf50Q96LR7 162 aa12.38□□□□□ -0.43
SSBP1-207ENST00000468267 SHANK2-AS3Q9BTD1 123 aa12.38□□□□□ -0.43
SSBP1-207ENST00000468267 SCRT1Q9BWW7 348 aa12.38□□□□□ -0.43
SSBP1-207ENST00000468267 SLC25A39Q9BZJ4 359 aaPredicted RBP12.38□□□□□ -0.43
SSBP1-207ENST00000468267 HIGD1AQ9Y241 93 aa12.38□□□□□ -0.43
SSBP1-207ENST00000468267 LSM5Q9Y4Y9 91 aaKnown RBP12.38□□□□□ -0.43
SSBP1-207ENST00000468267 H3BRN7 92 aa12.37□□□□□ -0.43
SSBP1-207ENST00000468267 RAP2BP61225 183 aa12.37□□□□□ -0.43
SSBP1-207ENST00000468267 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.37□□□□□ -0.43
SSBP1-207ENST00000468267 C20orf173Q96LM9 149 aa12.37□□□□□ -0.43
SSBP1-207ENST00000468267 HRH4Q9H3N8 390 aa12.37□□□□□ -0.43
SSBP1-207ENST00000468267 RPRMQ9NS64 109 aa12.37□□□□□ -0.43
SSBP1-207ENST00000468267 VPS13DQ5THJ4 4388 aa12.37□□□□□ -0.43
SSBP1-207ENST00000468267 UPK1BO75841 260 aa12.36□□□□□ -0.43
SSBP1-207ENST00000468267 IGKV3-20P01619 116 aa12.36□□□□□ -0.43
SSBP1-207ENST00000468267 EBLN2Q6P2I7 272 aa12.36□□□□□ -0.43
SSBP1-207ENST00000468267 C11orf1Q9H5F2 150 aa12.36□□□□□ -0.43
SSBP1-207ENST00000468267 PTTG2Q9NZH5 202 aa12.36□□□□□ -0.43
SSBP1-207ENST00000468267 ELOA3CA0A087WX78 387 aaPredicted RBP12.35□□□□□ -0.43
SSBP1-207ENST00000468267 A0A0J9YX75 114 aa12.35□□□□□ -0.43
SSBP1-207ENST00000468267 F6UB75 175 aa12.35□□□□□ -0.43
SSBP1-207ENST00000468267 OR5G3P0C626 314 aa12.35□□□□□ -0.43
SSBP1-207ENST00000468267 BCAP31P51572 246 aa12.35□□□□□ -0.43
SSBP1-207ENST00000468267 SLC38A11Q08AI6 406 aa12.35□□□□□ -0.43
SSBP1-207ENST00000468267 IL15RAQ13261 267 aa12.35□□□□□ -0.43
SSBP1-207ENST00000468267 PATE2Q6UY27 113 aa12.35□□□□□ -0.43
SSBP1-207ENST00000468267 S100A7AQ86SG5 101 aa12.35□□□□□ -0.43
SSBP1-207ENST00000468267 OR4B1Q8NGF8 309 aa12.35□□□□□ -0.43
SSBP1-207ENST00000468267 ARL6Q9H0F7 186 aa12.35□□□□□ -0.43
SSBP1-207ENST00000468267 GOSR2O14653 212 aa12.34□□□□□ -0.43
SSBP1-207ENST00000468267 AGPAT2O15120 278 aa12.34□□□□□ -0.43
SSBP1-207ENST00000468267 LY6G6CO95867 125 aa12.34□□□□□ -0.43
SSBP1-207ENST00000468267 RPL7P18124 248 aaKnown RBP12.34□□□□□ -0.43
SSBP1-207ENST00000468267 FXYD7P58549 80 aa12.34□□□□□ -0.43
SSBP1-207ENST00000468267 PSG9Q00887 426 aa12.34□□□□□ -0.43
SSBP1-207ENST00000468267 PXDC1Q5TGL8 231 aa12.34□□□□□ -0.43
SSBP1-207ENST00000468267 FAM78BQ5VT40 261 aa12.34□□□□□ -0.43
SSBP1-207ENST00000468267 ZNF546Q86UE3 836 aa12.34□□□□□ -0.43
SSBP1-207ENST00000468267 ZNF709Q8N972 641 aa12.34□□□□□ -0.43
SSBP1-207ENST00000468267 UHRF2Q96PU4 802 aa12.34□□□□□ -0.43
SSBP1-207ENST00000468267 EPPK1P58107 5090 aaKnown RBP12.33□□□□□ -0.44
SSBP1-207ENST00000468267 TRAV8-2A0A0B4J237 113 aa12.33□□□□□ -0.44
SSBP1-207ENST00000468267 FAM24AA6NFZ4 105 aa12.33□□□□□ -0.44
SSBP1-207ENST00000468267 CST7O76096 145 aa12.33□□□□□ -0.44
SSBP1-207ENST00000468267 PVALBP20472 110 aaPredicted RBP12.33□□□□□ -0.44
SSBP1-207ENST00000468267 CAV2P51636 162 aa12.33□□□□□ -0.44
SSBP1-207ENST00000468267 IFITM3Q01628 133 aa12.33□□□□□ -0.44
SSBP1-207ENST00000468267 ZNF705AQ6ZN79 300 aaPredicted RBP12.33□□□□□ -0.44
SSBP1-207ENST00000468267 ENKURQ8TC29 256 aa12.33□□□□□ -0.44
SSBP1-207ENST00000468267 MGST2Q99735 147 aa12.33□□□□□ -0.44
SSBP1-207ENST00000468267 SLC35B3Q9H1N7 401 aa12.33□□□□□ -0.44
SSBP1-207ENST00000468267 A8MTW9 85 aa12.32□□□□□ -0.44
SSBP1-207ENST00000468267 HLA-DMBP28068 263 aa12.32□□□□□ -0.44
SSBP1-207ENST00000468267 S100A10P60903 97 aa12.32□□□□□ -0.44
SSBP1-207ENST00000468267 FGL1Q08830 312 aa12.32□□□□□ -0.44
SSBP1-207ENST00000468267 RAB32Q13637 225 aa12.32□□□□□ -0.44
SSBP1-207ENST00000468267 IGFL4Q6B9Z1 124 aa12.32□□□□□ -0.44
SSBP1-207ENST00000468267 C2CD4CQ8TF44 421 aa12.32□□□□□ -0.44
SSBP1-207ENST00000468267 NEU1Q99519 415 aa12.32□□□□□ -0.44
SSBP1-207ENST00000468267 ARV1Q9H2C2 271 aa12.32□□□□□ -0.44
SSBP1-207ENST00000468267 GPN1Q9HCN4 374 aaPredicted RBP12.32□□□□□ -0.44
SSBP1-207ENST00000468267 LYRM2Q9NU23 88 aaPredicted RBP12.32□□□□□ -0.44
SSBP1-207ENST00000468267 RNF24Q9Y225 148 aa12.32□□□□□ -0.44
SSBP1-207ENST00000468267 DNAH6Q9C0G6 4158 aa12.31□□□□□ -0.44
SSBP1-207ENST00000468267 A0A087X0K7 114 aa12.31□□□□□ -0.44
SSBP1-207ENST00000468267 ZNF705FA8MVS1 300 aaPredicted RBP12.31□□□□□ -0.44
SSBP1-207ENST00000468267 C11orf94C9JXX5 98 aa12.31□□□□□ -0.44
SSBP1-207ENST00000468267 ZNF705DP0CH99 300 aaPredicted RBP12.31□□□□□ -0.44
SSBP1-207ENST00000468267 ZNF705BP0CI00 300 aaPredicted RBP12.31□□□□□ -0.44
SSBP1-207ENST00000468267 RNF182Q8N6D2 247 aa12.31□□□□□ -0.44
SSBP1-207ENST00000468267 SMIM9A6NGZ8 99 aa12.3□□□□□ -0.44
SSBP1-207ENST00000468267 CAMLGP49069 296 aa12.3□□□□□ -0.44
SSBP1-207ENST00000468267 SULT1A1P50225 295 aa12.3□□□□□ -0.44
SSBP1-207ENST00000468267 RAB31Q13636 194 aa12.3□□□□□ -0.44
SSBP1-207ENST00000468267 AMTNQ6UX39 209 aa12.3□□□□□ -0.44
SSBP1-207ENST00000468267 LINC00305Q7Z4B0 112 aa12.3□□□□□ -0.44
SSBP1-207ENST00000468267 NRARPQ7Z6K4 114 aa12.3□□□□□ -0.44
SSBP1-207ENST00000468267 UQCC1Q9NVA1 299 aa12.3□□□□□ -0.44
SSBP1-207ENST00000468267 CELA1Q9UNI1 258 aa12.3□□□□□ -0.44
SSBP1-207ENST00000468267 IGSF23A1L1A6 192 aa12.29□□□□□ -0.44
SSBP1-207ENST00000468267 MRPS12O15235 138 aaKnown RBP12.29□□□□□ -0.44
SSBP1-207ENST00000468267 COX7A2P2O60397 106 aa12.29□□□□□ -0.44
SSBP1-207ENST00000468267 DUSP14O95147 198 aaKnown RBP12.29□□□□□ -0.44
SSBP1-207ENST00000468267 S100A11P31949 105 aa12.29□□□□□ -0.44
SSBP1-207ENST00000468267 VWC2Q2TAL6 325 aa12.29□□□□□ -0.44
SSBP1-207ENST00000468267 Q6ZTC4 211 aa12.29□□□□□ -0.44
SSBP1-207ENST00000468267 TMEM252Q8N6L7 170 aa12.29□□□□□ -0.44
SSBP1-207ENST00000468267 TMEM37Q8WXS4 190 aa12.29□□□□□ -0.44
SSBP1-207ENST00000468267 WDR83OSQ9Y284 106 aa12.29□□□□□ -0.44
SSBP1-207ENST00000468267 FRAS1Q86XX4 4008 aa12.28□□□□□ -0.44
SSBP1-207ENST00000468267 IGHV3OR16-12A0A075B7B8 117 aa12.28□□□□□ -0.44
SSBP1-207ENST00000468267 CNN1P51911 297 aaKnown RBP12.28□□□□□ -0.44
SSBP1-207ENST00000468267 TCTAP57738 103 aa12.28□□□□□ -0.44
SSBP1-207ENST00000468267 C12orf74Q32Q52 190 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms