RNA–Protein interactions for RNA: ENST00000466591.1

COL7A1-206, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 2

Gene COL7A1, Length 778 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-206ENST00000466591 ZNF738Q8NE65 137 aa12.58□□□□□ -0.4
COL7A1-206ENST00000466591 CLUHP3Q96NS8 147 aa12.58□□□□□ -0.4
COL7A1-206ENST00000466591 SCRT1Q9BWW7 348 aa12.58□□□□□ -0.4
COL7A1-206ENST00000466591 SRRQ9GZT4 340 aa12.58□□□□□ -0.4
COL7A1-206ENST00000466591 GSKIPQ9P0R6 139 aa12.58□□□□□ -0.4
COL7A1-206ENST00000466591 RNF24Q9Y225 148 aa12.58□□□□□ -0.4
COL7A1-206ENST00000466591 HYPMO75409 117 aa12.57□□□□□ -0.4
COL7A1-206ENST00000466591 OR4E1P0C645 316 aa12.57□□□□□ -0.4
COL7A1-206ENST00000466591 LINC00869P0C866 280 aa12.57□□□□□ -0.4
COL7A1-206ENST00000466591 RPL7P18124 248 aaKnown RBP12.57□□□□□ -0.4
COL7A1-206ENST00000466591 ANXA7P20073 488 aaKnown RBP12.57□□□□□ -0.4
COL7A1-206ENST00000466591 FAM222AQ5U5X8 452 aa12.57□□□□□ -0.4
COL7A1-206ENST00000466591 TMEM144Q7Z5S9 345 aa12.57□□□□□ -0.4
COL7A1-206ENST00000466591 ZNF709Q8N972 641 aa12.57□□□□□ -0.4
COL7A1-206ENST00000466591 OR10P1Q8NGE3 313 aa12.57□□□□□ -0.4
COL7A1-206ENST00000466591 INSP01308 110 aa12.56□□□□□ -0.4
COL7A1-206ENST00000466591 DAD1P61803 113 aa12.56□□□□□ -0.4
COL7A1-206ENST00000466591 SELENOTP62341 195 aa12.56□□□□□ -0.4
COL7A1-206ENST00000466591 RHOBP62745 196 aa12.56□□□□□ -0.4
COL7A1-206ENST00000466591 ZNF846Q147U1 533 aa12.56□□□□□ -0.4
COL7A1-206ENST00000466591 IAH1Q2TAA2 248 aaPredicted RBP12.56□□□□□ -0.4
COL7A1-206ENST00000466591 POM121L12Q8N7R1 296 aa12.56□□□□□ -0.4
COL7A1-206ENST00000466591 SLC25A39Q9BZJ4 359 aaPredicted RBP12.56□□□□□ -0.4
COL7A1-206ENST00000466591 FLVCR2Q9UPI3 526 aa12.56□□□□□ -0.4
COL7A1-206ENST00000466591 YTHDF2Q9Y5A9 579 aaKnown RBP12.56□□□□□ -0.4
COL7A1-206ENST00000466591 PRSS46E5RG02 174 aa12.55□□□□□ -0.4
COL7A1-206ENST00000466591 L7N2F9 121 aa12.55□□□□□ -0.4
COL7A1-206ENST00000466591 ZNF701M0R085 212 aaPredicted RBP12.55□□□□□ -0.4
COL7A1-206ENST00000466591 METTL15P1P0C7V9 234 aa12.55□□□□□ -0.4
COL7A1-206ENST00000466591 CNN1P51911 297 aaKnown RBP12.55□□□□□ -0.4
COL7A1-206ENST00000466591 VAMP2P63027 116 aa12.55□□□□□ -0.4
COL7A1-206ENST00000466591 ID3Q02535 119 aa12.55□□□□□ -0.4
COL7A1-206ENST00000466591 IGFL4Q6B9Z1 124 aa12.55□□□□□ -0.4
COL7A1-206ENST00000466591 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.55□□□□□ -0.4
COL7A1-206ENST00000466591 C20orf173Q96LM9 149 aa12.55□□□□□ -0.4
COL7A1-206ENST00000466591 IGF2BP2-AS1Q96M15 143 aa12.55□□□□□ -0.4
COL7A1-206ENST00000466591 ARL6Q9H0F7 186 aa12.55□□□□□ -0.4
COL7A1-206ENST00000466591 DKK2Q9UBU2 259 aa12.55□□□□□ -0.4
COL7A1-206ENST00000466591 H3BRN7 92 aa12.54□□□□□ -0.4
COL7A1-206ENST00000466591 M0R2N4 97 aa12.54□□□□□ -0.4
COL7A1-206ENST00000466591 GOSR2O14653 212 aa12.54□□□□□ -0.4
COL7A1-206ENST00000466591 BAK1Q16611 211 aa12.54□□□□□ -0.4
COL7A1-206ENST00000466591 SPINK13Q1W4C9 94 aa12.54□□□□□ -0.4
COL7A1-206ENST00000466591 TMEM182Q6ZP80 229 aaPredicted RBP12.54□□□□□ -0.4
COL7A1-206ENST00000466591 RNF182Q8N6D2 247 aa12.54□□□□□ -0.4
COL7A1-206ENST00000466591 SMIM8Q96KF7 97 aa12.54□□□□□ -0.4
COL7A1-206ENST00000466591 SHANK2-AS3Q9BTD1 123 aa12.54□□□□□ -0.4
COL7A1-206ENST00000466591 NPVFQ9HCQ7 196 aa12.54□□□□□ -0.4
COL7A1-206ENST00000466591 DLK1P80370 383 aa12.53□□□□□ -0.4
COL7A1-206ENST00000466591 HIST1H1AQ02539 215 aaPredicted RBP12.53□□□□□ -0.4
COL7A1-206ENST00000466591 TEPPQ6URK8 271 aa12.53□□□□□ -0.4
COL7A1-206ENST00000466591 LINC00336Q6ZUF6 198 aa12.53□□□□□ -0.4
COL7A1-206ENST00000466591 FAM210BQ96KR6 192 aa12.53□□□□□ -0.4
COL7A1-206ENST00000466591 KMT2AQ03164 3969 aa12.53□□□□□ -0.4
COL7A1-206ENST00000466591 FAM25EA8MYX2 175 aa12.52□□□□□ -0.41
COL7A1-206ENST00000466591 M0R2Z0 102 aa12.52□□□□□ -0.41
COL7A1-206ENST00000466591 BCAP31P51572 246 aa12.52□□□□□ -0.41
COL7A1-206ENST00000466591 B2MP61769 119 aa12.52□□□□□ -0.41
COL7A1-206ENST00000466591 CNPY1Q3B7I2 92 aa12.52□□□□□ -0.41
COL7A1-206ENST00000466591 ZNF546Q86UE3 836 aa12.52□□□□□ -0.41
COL7A1-206ENST00000466591 C1orf158Q8N1D5 194 aa12.52□□□□□ -0.41
COL7A1-206ENST00000466591 UHRF2Q96PU4 802 aa12.52□□□□□ -0.41
COL7A1-206ENST00000466591 COX7A2P2O60397 106 aa12.51□□□□□ -0.41
COL7A1-206ENST00000466591 HTN1P15515 57 aa12.51□□□□□ -0.41
COL7A1-206ENST00000466591 SLC38A11Q08AI6 406 aa12.51□□□□□ -0.41
COL7A1-206ENST00000466591 OR11H7Q8NGC8 314 aa12.51□□□□□ -0.41
COL7A1-206ENST00000466591 RBM38Q9H0Z9 239 aaKnown RBP12.51□□□□□ -0.41
COL7A1-206ENST00000466591 PLA2G2EQ9NZK7 142 aa12.51□□□□□ -0.41
COL7A1-206ENST00000466591 ZNF705GA8MUZ8 300 aaPredicted RBP12.5□□□□□ -0.41
COL7A1-206ENST00000466591 BOLA2-SMG1P6H3BVE0 249 aa12.5□□□□□ -0.41
COL7A1-206ENST00000466591 TSC22D2O75157 780 aa12.5□□□□□ -0.41
COL7A1-206ENST00000466591 RAB31Q13636 194 aa12.5□□□□□ -0.41
COL7A1-206ENST00000466591 ZBTB8BQ8NAP8 495 aaPredicted RBP12.5□□□□□ -0.41
COL7A1-206ENST00000466591 LINC01587Q99440 93 aa12.5□□□□□ -0.41
COL7A1-206ENST00000466591 ATG101Q9BSB4 218 aa12.5□□□□□ -0.41
COL7A1-206ENST00000466591 C20orf85Q9H1P6 137 aa12.5□□□□□ -0.41
COL7A1-206ENST00000466591 ARV1Q9H2C2 271 aa12.5□□□□□ -0.41
COL7A1-206ENST00000466591 IGLV2-18A0A075B6J9 118 aa12.49□□□□□ -0.41
COL7A1-206ENST00000466591 TRAV12-2A0A075B6T6 113 aa12.49□□□□□ -0.41
COL7A1-206ENST00000466591 C5orf51A6NDU8 294 aa12.49□□□□□ -0.41
COL7A1-206ENST00000466591 CCNKO75909 580 aa12.49□□□□□ -0.41
COL7A1-206ENST00000466591 DEFB130BP0DP73 79 aa12.49□□□□□ -0.41
COL7A1-206ENST00000466591 DEFB130AP0DP74 79 aa12.49□□□□□ -0.41
COL7A1-206ENST00000466591 IL7P13232 177 aa12.49□□□□□ -0.41
COL7A1-206ENST00000466591 TAS2R30P59541 319 aa12.49□□□□□ -0.41
COL7A1-206ENST00000466591 OXA1LQ15070 435 aa12.49□□□□□ -0.41
COL7A1-206ENST00000466591 PXDC1Q5TGL8 231 aa12.49□□□□□ -0.41
COL7A1-206ENST00000466591 TMEM14EPQ6UXP3 125 aa12.49□□□□□ -0.41
COL7A1-206ENST00000466591 BAP18Q8IXM2 172 aa12.49□□□□□ -0.41
COL7A1-206ENST00000466591 LSM5Q9Y4Y9 91 aaKnown RBP12.49□□□□□ -0.41
COL7A1-206ENST00000466591 TRAV8-2A0A0B4J237 113 aa12.48□□□□□ -0.41
COL7A1-206ENST00000466591 FNDC10F2Z333 226 aa12.48□□□□□ -0.41
COL7A1-206ENST00000466591 PVALBP20472 110 aaPredicted RBP12.48□□□□□ -0.41
COL7A1-206ENST00000466591 CAV2P51636 162 aa12.48□□□□□ -0.41
COL7A1-206ENST00000466591 SOHLH1Q5JUK2 328 aa12.48□□□□□ -0.41
COL7A1-206ENST00000466591 TMEM88Q6PEY1 159 aa12.48□□□□□ -0.41
COL7A1-206ENST00000466591 LINC00305Q7Z4B0 112 aa12.48□□□□□ -0.41
COL7A1-206ENST00000466591 OR8A1Q8NGG7 326 aa12.48□□□□□ -0.41
COL7A1-206ENST00000466591 MITD1Q8WV92 249 aa12.48□□□□□ -0.41
COL7A1-206ENST00000466591 RCL1Q9Y2P8 373 aaKnown RBP12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms