RNA–Protein interactions for RNA: ENST00000442232.1

TTC28-203, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 2

Gene TTC28, Length 499 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-203ENST00000442232 PRSS46E5RG02 174 aa8.42□□□□□ -1.06
TTC28-203ENST00000442232 SSSCA1O60232 199 aa8.42□□□□□ -1.06
TTC28-203ENST00000442232 SCGB1D2O95969 90 aa8.42□□□□□ -1.06
TTC28-203ENST00000442232 RPL7P18124 248 aaKnown RBP8.42□□□□□ -1.06
TTC28-203ENST00000442232 GATA2P23769 480 aaPredicted RBP8.42□□□□□ -1.06
TTC28-203ENST00000442232 SELENOTP62341 195 aa8.42□□□□□ -1.06
TTC28-203ENST00000442232 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.42□□□□□ -1.06
TTC28-203ENST00000442232 CYP2G1PQ6ZSU1 146 aa8.42□□□□□ -1.06
TTC28-203ENST00000442232 TMEM144Q7Z5S9 345 aa8.42□□□□□ -1.06
TTC28-203ENST00000442232 ZNF738Q8NE65 137 aa8.42□□□□□ -1.06
TTC28-203ENST00000442232 LRRC20Q8TCA0 184 aa8.42□□□□□ -1.06
TTC28-203ENST00000442232 IGF2BP2-AS1Q96M15 143 aa8.42□□□□□ -1.06
TTC28-203ENST00000442232 PPP1R14DQ9NXH3 145 aa8.42□□□□□ -1.06
TTC28-203ENST00000442232 MGAT4CQ9UBM8 478 aa8.42□□□□□ -1.06
TTC28-203ENST00000442232 RNF24Q9Y225 148 aa8.42□□□□□ -1.06
TTC28-203ENST00000442232 YTHDF2Q9Y5A9 579 aaKnown RBP8.42□□□□□ -1.06
TTC28-203ENST00000442232 H3BRN7 92 aa8.41□□□□□ -1.06
TTC28-203ENST00000442232 HYPMO75409 117 aa8.41□□□□□ -1.06
TTC28-203ENST00000442232 ADAP1O75689 374 aa8.41□□□□□ -1.06
TTC28-203ENST00000442232 OR5G3P0C626 314 aa8.41□□□□□ -1.06
TTC28-203ENST00000442232 B2MP61769 119 aa8.41□□□□□ -1.06
TTC28-203ENST00000442232 POLR2GP62487 172 aaKnown RBP eCLIP8.41□□□□□ -1.06
TTC28-203ENST00000442232 OXA1LQ15070 435 aa8.41□□□□□ -1.06
TTC28-203ENST00000442232 C4orf46Q504U0 113 aa8.41□□□□□ -1.06
TTC28-203ENST00000442232 C20orf173Q96LM9 149 aa8.41□□□□□ -1.06
TTC28-203ENST00000442232 SCRT1Q9BWW7 348 aa8.41□□□□□ -1.06
TTC28-203ENST00000442232 SLC25A39Q9BZJ4 359 aaPredicted RBP8.41□□□□□ -1.06
TTC28-203ENST00000442232 M0R2N4 97 aa8.4□□□□□ -1.06
TTC28-203ENST00000442232 NDUFB6O95139 128 aa8.4□□□□□ -1.06
TTC28-203ENST00000442232 LINC00869P0C866 280 aa8.4□□□□□ -1.06
TTC28-203ENST00000442232 CNN1P51911 297 aaKnown RBP8.4□□□□□ -1.06
TTC28-203ENST00000442232 RRAS2P62070 204 aaPredicted RBP8.4□□□□□ -1.06
TTC28-203ENST00000442232 RHOBP62745 196 aa8.4□□□□□ -1.06
TTC28-203ENST00000442232 DLK1P80370 383 aa8.4□□□□□ -1.06
TTC28-203ENST00000442232 GSG1LQ6UXU4 331 aa8.4□□□□□ -1.06
TTC28-203ENST00000442232 C1orf158Q8N1D5 194 aa8.4□□□□□ -1.06
TTC28-203ENST00000442232 SHANK2-AS3Q9BTD1 123 aa8.4□□□□□ -1.06
TTC28-203ENST00000442232 SRRQ9GZT4 340 aa8.4□□□□□ -1.06
TTC28-203ENST00000442232 LINC00854A0A1B0GVQ3 168 aa8.39□□□□□ -1.07
TTC28-203ENST00000442232 A8MTW9 85 aa8.39□□□□□ -1.07
TTC28-203ENST00000442232 M0R2Z0 102 aa8.39□□□□□ -1.07
TTC28-203ENST00000442232 OR4E1P0C645 316 aa8.39□□□□□ -1.07
TTC28-203ENST00000442232 METTL15P1P0C7V9 234 aa8.39□□□□□ -1.07
TTC28-203ENST00000442232 ID3Q02535 119 aa8.39□□□□□ -1.07
TTC28-203ENST00000442232 HIST1H1AQ02539 215 aaPredicted RBP8.39□□□□□ -1.07
TTC28-203ENST00000442232 SPINK13Q1W4C9 94 aa8.39□□□□□ -1.07
TTC28-203ENST00000442232 IAH1Q2TAA2 248 aaPredicted RBP8.39□□□□□ -1.07
TTC28-203ENST00000442232 SOHLH1Q5JUK2 328 aa8.39□□□□□ -1.07
TTC28-203ENST00000442232 RNF182Q8N6D2 247 aa8.39□□□□□ -1.07
TTC28-203ENST00000442232 OR11H7Q8NGC8 314 aa8.39□□□□□ -1.07
TTC28-203ENST00000442232 OR10P1Q8NGE3 313 aa8.39□□□□□ -1.07
TTC28-203ENST00000442232 SMIM8Q96KF7 97 aa8.39□□□□□ -1.07
TTC28-203ENST00000442232 NPVFQ9HCQ7 196 aa8.39□□□□□ -1.07
TTC28-203ENST00000442232 PRSS29PA6NIE9 313 aa8.38□□□□□ -1.07
TTC28-203ENST00000442232 LYRM9A8MSI8 78 aa8.38□□□□□ -1.07
TTC28-203ENST00000442232 FNDC10F2Z333 226 aa8.38□□□□□ -1.07
TTC28-203ENST00000442232 BOLA2-SMG1P6H3BVE0 249 aa8.38□□□□□ -1.07
TTC28-203ENST00000442232 ZNF701M0R085 212 aaPredicted RBP8.38□□□□□ -1.07
TTC28-203ENST00000442232 GOSR2O14653 212 aa8.38□□□□□ -1.07
TTC28-203ENST00000442232 ANXA7P20073 488 aaKnown RBP8.38□□□□□ -1.07
TTC28-203ENST00000442232 CNPY1Q3B7I2 92 aa8.38□□□□□ -1.07
TTC28-203ENST00000442232 LGALS9BQ3B8N2 356 aa8.38□□□□□ -1.07
TTC28-203ENST00000442232 RNF212Q495C1 297 aa8.38□□□□□ -1.07
TTC28-203ENST00000442232 PXDC1Q5TGL8 231 aa8.38□□□□□ -1.07
TTC28-203ENST00000442232 TMEM88Q6PEY1 159 aa8.38□□□□□ -1.07
TTC28-203ENST00000442232 TEPPQ6URK8 271 aa8.38□□□□□ -1.07
TTC28-203ENST00000442232 AMTNQ6UX39 209 aa8.38□□□□□ -1.07
TTC28-203ENST00000442232 TMEM182Q6ZP80 229 aaPredicted RBP8.38□□□□□ -1.07
TTC28-203ENST00000442232 ZNF546Q86UE3 836 aa8.38□□□□□ -1.07
TTC28-203ENST00000442232 C15orf53Q8NAA6 179 aa8.38□□□□□ -1.07
TTC28-203ENST00000442232 ARL6Q9H0F7 186 aa8.38□□□□□ -1.07
TTC28-203ENST00000442232 GSKIPQ9P0R6 139 aa8.38□□□□□ -1.07
TTC28-203ENST00000442232 FLVCR2Q9UPI3 526 aa8.38□□□□□ -1.07
TTC28-203ENST00000442232 IGLV2-18A0A075B6J9 118 aa8.37□□□□□ -1.07
TTC28-203ENST00000442232 ZNF705GA8MUZ8 300 aaPredicted RBP8.37□□□□□ -1.07
TTC28-203ENST00000442232 L7N2F9 121 aa8.37□□□□□ -1.07
TTC28-203ENST00000442232 TSC22D2O75157 780 aa8.37□□□□□ -1.07
TTC28-203ENST00000442232 TAS2R30P59541 319 aa8.37□□□□□ -1.07
TTC28-203ENST00000442232 PLP1P60201 277 aa8.37□□□□□ -1.07
TTC28-203ENST00000442232 VAMP2P63027 116 aa8.37□□□□□ -1.07
TTC28-203ENST00000442232 ZNF846Q147U1 533 aa8.37□□□□□ -1.07
TTC28-203ENST00000442232 IGFL4Q6B9Z1 124 aa8.37□□□□□ -1.07
TTC28-203ENST00000442232 BAP18Q8IXM2 172 aa8.37□□□□□ -1.07
TTC28-203ENST00000442232 TMEM256Q8N2U0 113 aa8.37□□□□□ -1.07
TTC28-203ENST00000442232 UHRF2Q96PU4 802 aa8.37□□□□□ -1.07
TTC28-203ENST00000442232 ATG101Q9BSB4 218 aa8.37□□□□□ -1.07
TTC28-203ENST00000442232 A0A087X0K7 114 aa8.36□□□□□ -1.07
TTC28-203ENST00000442232 TRAV8-2A0A0B4J237 113 aa8.36□□□□□ -1.07
TTC28-203ENST00000442232 COX7A2P2O60397 106 aa8.36□□□□□ -1.07
TTC28-203ENST00000442232 DEFB130BP0DP73 79 aa8.36□□□□□ -1.07
TTC28-203ENST00000442232 DEFB130AP0DP74 79 aa8.36□□□□□ -1.07
TTC28-203ENST00000442232 CXCL2P19875 107 aa8.36□□□□□ -1.07
TTC28-203ENST00000442232 SLC38A11Q08AI6 406 aa8.36□□□□□ -1.07
TTC28-203ENST00000442232 PSG3Q16557 428 aa8.36□□□□□ -1.07
TTC28-203ENST00000442232 BAK1Q16611 211 aa8.36□□□□□ -1.07
TTC28-203ENST00000442232 LCN15Q6UWW0 184 aa8.36□□□□□ -1.07
TTC28-203ENST00000442232 TMEM14EPQ6UXP3 125 aa8.36□□□□□ -1.07
TTC28-203ENST00000442232 ZBTB8BQ8NAP8 495 aaPredicted RBP8.36□□□□□ -1.07
TTC28-203ENST00000442232 OR8A1Q8NGG7 326 aa8.36□□□□□ -1.07
TTC28-203ENST00000442232 LINC01587Q99440 93 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms