RNA–Protein interactions for RNA: ENST00000417122.6

ITGB1-204, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-204ENST00000417122 SCRT1Q9BWW7 348 aa11.33□□□□□ -0.6
ITGB1-204ENST00000417122 DNAH1Q9P2D7 4330 aa11.32□□□□□ -0.6
ITGB1-204ENST00000417122 DEDDO75618 318 aa11.32□□□□□ -0.6
ITGB1-204ENST00000417122 UPK1BO75841 260 aa11.32□□□□□ -0.6
ITGB1-204ENST00000417122 OR5G3P0C626 314 aa11.32□□□□□ -0.6
ITGB1-204ENST00000417122 BCAP31P51572 246 aa11.32□□□□□ -0.6
ITGB1-204ENST00000417122 SLC38A11Q08AI6 406 aa11.32□□□□□ -0.6
ITGB1-204ENST00000417122 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.32□□□□□ -0.6
ITGB1-204ENST00000417122 OR4B1Q8NGF8 309 aa11.32□□□□□ -0.6
ITGB1-204ENST00000417122 ENKURQ8TC29 256 aa11.32□□□□□ -0.6
ITGB1-204ENST00000417122 LINC00476Q8WZB0 136 aa11.32□□□□□ -0.6
ITGB1-204ENST00000417122 RPRMQ9NS64 109 aa11.32□□□□□ -0.6
ITGB1-204ENST00000417122 PTTG2Q9NZH5 202 aa11.32□□□□□ -0.6
ITGB1-204ENST00000417122 CAV2P51636 162 aa11.31□□□□□ -0.6
ITGB1-204ENST00000417122 FXYD7P58549 80 aa11.31□□□□□ -0.6
ITGB1-204ENST00000417122 SPATA31B1PQ5VZV4 182 aa11.31□□□□□ -0.6
ITGB1-204ENST00000417122 EBLN2Q6P2I7 272 aa11.31□□□□□ -0.6
ITGB1-204ENST00000417122 S100A7AQ86SG5 101 aa11.31□□□□□ -0.6
ITGB1-204ENST00000417122 C20orf173Q96LM9 149 aa11.31□□□□□ -0.6
ITGB1-204ENST00000417122 CLUHP3Q96NS8 147 aa11.31□□□□□ -0.6
ITGB1-204ENST00000417122 ARL6Q9H0F7 186 aa11.31□□□□□ -0.6
ITGB1-204ENST00000417122 HRH4Q9H3N8 390 aa11.31□□□□□ -0.6
ITGB1-204ENST00000417122 C11orf1Q9H5F2 150 aa11.31□□□□□ -0.6
ITGB1-204ENST00000417122 A0A0J9YX75 114 aa11.3□□□□□ -0.6
ITGB1-204ENST00000417122 FAM24AA6NFZ4 105 aa11.3□□□□□ -0.6
ITGB1-204ENST00000417122 F6UB75 175 aa11.3□□□□□ -0.6
ITGB1-204ENST00000417122 GOSR2O14653 212 aa11.3□□□□□ -0.6
ITGB1-204ENST00000417122 AGPAT2O15120 278 aa11.3□□□□□ -0.6
ITGB1-204ENST00000417122 LY6G6CO95867 125 aa11.3□□□□□ -0.6
ITGB1-204ENST00000417122 RPL7P18124 248 aaKnown RBP11.3□□□□□ -0.6
ITGB1-204ENST00000417122 PVALBP20472 110 aaPredicted RBP11.3□□□□□ -0.6
ITGB1-204ENST00000417122 S100A10P60903 97 aa11.3□□□□□ -0.6
ITGB1-204ENST00000417122 FGL1Q08830 312 aa11.3□□□□□ -0.6
ITGB1-204ENST00000417122 ZNF546Q86UE3 836 aa11.3□□□□□ -0.6
ITGB1-204ENST00000417122 UHRF2Q96PU4 802 aa11.3□□□□□ -0.6
ITGB1-204ENST00000417122 ALMS1Q8TCU4 4167 aa11.3□□□□□ -0.6
ITGB1-204ENST00000417122 ELOA3CA0A087WX78 387 aaPredicted RBP11.29□□□□□ -0.6
ITGB1-204ENST00000417122 IFITM3Q01628 133 aa11.29□□□□□ -0.6
ITGB1-204ENST00000417122 IL15RAQ13261 267 aa11.29□□□□□ -0.6
ITGB1-204ENST00000417122 PXDC1Q5TGL8 231 aa11.29□□□□□ -0.6
ITGB1-204ENST00000417122 FAM78BQ5VT40 261 aa11.29□□□□□ -0.6
ITGB1-204ENST00000417122 PATE2Q6UY27 113 aa11.29□□□□□ -0.6
ITGB1-204ENST00000417122 ZNF709Q8N972 641 aa11.29□□□□□ -0.6
ITGB1-204ENST00000417122 ARV1Q9H2C2 271 aa11.29□□□□□ -0.6
ITGB1-204ENST00000417122 GPN1Q9HCN4 374 aaPredicted RBP11.29□□□□□ -0.6
ITGB1-204ENST00000417122 TRAV8-2A0A0B4J237 113 aa11.28□□□□□ -0.6
ITGB1-204ENST00000417122 CST7O76096 145 aa11.28□□□□□ -0.6
ITGB1-204ENST00000417122 PSG9Q00887 426 aa11.28□□□□□ -0.6
ITGB1-204ENST00000417122 RAB32Q13637 225 aa11.28□□□□□ -0.6
ITGB1-204ENST00000417122 IGFL4Q6B9Z1 124 aa11.28□□□□□ -0.6
ITGB1-204ENST00000417122 ZNF705AQ6ZN79 300 aaPredicted RBP11.28□□□□□ -0.6
ITGB1-204ENST00000417122 MGST2Q99735 147 aa11.28□□□□□ -0.6
ITGB1-204ENST00000417122 SLC35B3Q9H1N7 401 aa11.28□□□□□ -0.6
ITGB1-204ENST00000417122 LYRM2Q9NU23 88 aaPredicted RBP11.28□□□□□ -0.6
ITGB1-204ENST00000417122 RNF24Q9Y225 148 aa11.28□□□□□ -0.6
ITGB1-204ENST00000417122 C11orf94C9JXX5 98 aa11.27□□□□□ -0.61
ITGB1-204ENST00000417122 HLA-DMBP28068 263 aa11.27□□□□□ -0.61
ITGB1-204ENST00000417122 RAB31Q13636 194 aa11.27□□□□□ -0.61
ITGB1-204ENST00000417122 LINC00305Q7Z4B0 112 aa11.27□□□□□ -0.61
ITGB1-204ENST00000417122 C2CD4CQ8TF44 421 aa11.27□□□□□ -0.61
ITGB1-204ENST00000417122 NEU1Q99519 415 aa11.27□□□□□ -0.61
ITGB1-204ENST00000417122 IGHV3OR16-12A0A075B7B8 117 aa11.26□□□□□ -0.61
ITGB1-204ENST00000417122 A0A087X0K7 114 aa11.26□□□□□ -0.61
ITGB1-204ENST00000417122 ZNF705FA8MVS1 300 aaPredicted RBP11.26□□□□□ -0.61
ITGB1-204ENST00000417122 COX7A2P2O60397 106 aa11.26□□□□□ -0.61
ITGB1-204ENST00000417122 ZNF705DP0CH99 300 aaPredicted RBP11.26□□□□□ -0.61
ITGB1-204ENST00000417122 ZNF705BP0CI00 300 aaPredicted RBP11.26□□□□□ -0.61
ITGB1-204ENST00000417122 CAMLGP49069 296 aa11.26□□□□□ -0.61
ITGB1-204ENST00000417122 SULT1A1P50225 295 aa11.26□□□□□ -0.61
ITGB1-204ENST00000417122 NRARPQ7Z6K4 114 aa11.26□□□□□ -0.61
ITGB1-204ENST00000417122 RNF182Q8N6D2 247 aa11.26□□□□□ -0.61
ITGB1-204ENST00000417122 TMEM252Q8N6L7 170 aa11.26□□□□□ -0.61
ITGB1-204ENST00000417122 UQCC1Q9NVA1 299 aa11.26□□□□□ -0.61
ITGB1-204ENST00000417122 IGSF23A1L1A6 192 aa11.25□□□□□ -0.61
ITGB1-204ENST00000417122 A8MTW9 85 aa11.25□□□□□ -0.61
ITGB1-204ENST00000417122 INMT-MINDY4F8WBC2 141 aa11.25□□□□□ -0.61
ITGB1-204ENST00000417122 PRAF2O60831 178 aa11.25□□□□□ -0.61
ITGB1-204ENST00000417122 S100A11P31949 105 aa11.25□□□□□ -0.61
ITGB1-204ENST00000417122 VWC2Q2TAL6 325 aa11.25□□□□□ -0.61
ITGB1-204ENST00000417122 Q6ZTC4 211 aa11.25□□□□□ -0.61
ITGB1-204ENST00000417122 STX12Q86Y82 276 aa11.25□□□□□ -0.61
ITGB1-204ENST00000417122 ZNF738Q8NE65 137 aa11.25□□□□□ -0.61
ITGB1-204ENST00000417122 LRRC20Q8TCA0 184 aa11.25□□□□□ -0.61
ITGB1-204ENST00000417122 TMEM37Q8WXS4 190 aa11.25□□□□□ -0.61
ITGB1-204ENST00000417122 CELA1Q9UNI1 258 aa11.25□□□□□ -0.61
ITGB1-204ENST00000417122 WDR83OSQ9Y284 106 aa11.25□□□□□ -0.61
ITGB1-204ENST00000417122 SMIM9A6NGZ8 99 aa11.24□□□□□ -0.61
ITGB1-204ENST00000417122 MRPS12O15235 138 aaKnown RBP11.24□□□□□ -0.61
ITGB1-204ENST00000417122 DUSP14O95147 198 aaKnown RBP11.24□□□□□ -0.61
ITGB1-204ENST00000417122 SIX6O95475 246 aa11.24□□□□□ -0.61
ITGB1-204ENST00000417122 CNN1P51911 297 aaKnown RBP11.24□□□□□ -0.61
ITGB1-204ENST00000417122 HBG1P69891 147 aa11.24□□□□□ -0.61
ITGB1-204ENST00000417122 HBG2P69892 147 aa11.24□□□□□ -0.61
ITGB1-204ENST00000417122 C10orf113Q5VZT2 155 aa11.24□□□□□ -0.61
ITGB1-204ENST00000417122 MIC13Q5XKP0 118 aa11.24□□□□□ -0.61
ITGB1-204ENST00000417122 AMTNQ6UX39 209 aa11.24□□□□□ -0.61
ITGB1-204ENST00000417122 Q6ZRG5 221 aa11.24□□□□□ -0.61
ITGB1-204ENST00000417122 GOLT1BQ9Y3E0 138 aa11.24□□□□□ -0.61
ITGB1-204ENST00000417122 TRAV10A0A0B4J240 114 aa11.23□□□□□ -0.61
ITGB1-204ENST00000417122 UBE2L5PA0A1B0GUS4 154 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms