RNA–Protein interactions for RNA: ENST00000411464.3

MRPL55-220, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 767 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-220ENST00000411464 SCP2D1Q9UJQ7 156 aa11.76□□□□□ -0.53
MRPL55-220ENST00000411464 PAIP2BQ9ULR5 123 aaKnown RBP11.76□□□□□ -0.53
MRPL55-220ENST00000411464 RABL2BQ9UNT1 228 aa11.76□□□□□ -0.53
MRPL55-220ENST00000411464 PRM2P04554 102 aa11.75□□□□□ -0.53
MRPL55-220ENST00000411464 ANXA3P12429 323 aa11.75□□□□□ -0.53
MRPL55-220ENST00000411464 CNN1P51911 297 aaKnown RBP11.75□□□□□ -0.53
MRPL55-220ENST00000411464 SRPXP78539 464 aa11.75□□□□□ -0.53
MRPL55-220ENST00000411464 SPINK13Q1W4C9 94 aa11.75□□□□□ -0.53
MRPL55-220ENST00000411464 ZNRF2Q8NHG8 242 aa11.75□□□□□ -0.53
MRPL55-220ENST00000411464 SLC25A32Q9H2D1 315 aa11.75□□□□□ -0.53
MRPL55-220ENST00000411464 PIGBOS1A0A0B4J2F0 54 aa11.74□□□□□ -0.53
MRPL55-220ENST00000411464 ZNF98A6NK75 572 aa11.74□□□□□ -0.53
MRPL55-220ENST00000411464 M0R2Z0 102 aa11.74□□□□□ -0.53
MRPL55-220ENST00000411464 CTDSPLO15194 276 aa11.74□□□□□ -0.53
MRPL55-220ENST00000411464 TSPOP30536 169 aa11.74□□□□□ -0.53
MRPL55-220ENST00000411464 S100A7P31151 101 aa11.74□□□□□ -0.53
MRPL55-220ENST00000411464 PYDC2Q56P42 97 aa11.74□□□□□ -0.53
MRPL55-220ENST00000411464 LINC00299Q6ZSB3 139 aa11.74□□□□□ -0.53
MRPL55-220ENST00000411464 OR4D5Q8NGN0 318 aa11.74□□□□□ -0.53
MRPL55-220ENST00000411464 OR1B1Q8NGR6 318 aa11.74□□□□□ -0.53
MRPL55-220ENST00000411464 SLC45A2Q9UMX9 530 aa11.74□□□□□ -0.53
MRPL55-220ENST00000411464 IGKV1OR2-108A0A075B7D4 117 aa11.73□□□□□ -0.53
MRPL55-220ENST00000411464 ATP5G1P05496 136 aa11.73□□□□□ -0.53
MRPL55-220ENST00000411464 ORM2P19652 201 aa11.73□□□□□ -0.53
MRPL55-220ENST00000411464 ATP5G3P48201 142 aa11.73□□□□□ -0.53
MRPL55-220ENST00000411464 THAP8Q8NA92 274 aa11.73□□□□□ -0.53
MRPL55-220ENST00000411464 OR11H7Q8NGC8 314 aa11.73□□□□□ -0.53
MRPL55-220ENST00000411464 GPR82Q96P67 336 aa11.73□□□□□ -0.53
MRPL55-220ENST00000411464 ANKRD20A5PA0PJZ0 165 aa11.72□□□□□ -0.53
MRPL55-220ENST00000411464 CRXO43186 299 aaPredicted RBP11.72□□□□□ -0.53
MRPL55-220ENST00000411464 IAPPP10997 89 aa11.72□□□□□ -0.53
MRPL55-220ENST00000411464 RPP30P78346 268 aaKnown RBP11.72□□□□□ -0.53
MRPL55-220ENST00000411464 FGL1Q08830 312 aa11.72□□□□□ -0.53
MRPL55-220ENST00000411464 FCN2Q15485 313 aa11.72□□□□□ -0.53
MRPL55-220ENST00000411464 IGFL4Q6B9Z1 124 aa11.72□□□□□ -0.53
MRPL55-220ENST00000411464 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.72□□□□□ -0.53
MRPL55-220ENST00000411464 BPIFCQ8NFQ6 507 aa11.72□□□□□ -0.53
MRPL55-220ENST00000411464 TMEM147Q9BVK8 224 aa11.72□□□□□ -0.53
MRPL55-220ENST00000411464 SRRQ9GZT4 340 aa11.72□□□□□ -0.53
MRPL55-220ENST00000411464 MCUBQ9NWR8 336 aa11.72□□□□□ -0.53
MRPL55-220ENST00000411464 CBY3A6NI87 242 aa11.71□□□□□ -0.53
MRPL55-220ENST00000411464 AZU1P20160 251 aa11.71□□□□□ -0.53
MRPL55-220ENST00000411464 CLINT1Q14677 625 aa11.71□□□□□ -0.53
MRPL55-220ENST00000411464 BAP18Q8IXM2 172 aa11.71□□□□□ -0.53
MRPL55-220ENST00000411464 S100ZQ8WXG8 99 aa11.71□□□□□ -0.53
MRPL55-220ENST00000411464 C17orf77Q96MU5 243 aa11.71□□□□□ -0.53
MRPL55-220ENST00000411464 LINC01587Q99440 93 aa11.71□□□□□ -0.53
MRPL55-220ENST00000411464 TRAV12-2A0A075B6T6 113 aa11.7□□□□□ -0.54
MRPL55-220ENST00000411464 PITX3O75364 302 aa11.7□□□□□ -0.54
MRPL55-220ENST00000411464 MED6O75586 246 aa11.7□□□□□ -0.54
MRPL55-220ENST00000411464 RNF182Q8N6D2 247 aa11.7□□□□□ -0.54
MRPL55-220ENST00000411464 ZNF738Q8NE65 137 aa11.7□□□□□ -0.54
MRPL55-220ENST00000411464 CIB3Q96Q77 187 aaPredicted RBP11.7□□□□□ -0.54
MRPL55-220ENST00000411464 SDHCQ99643 169 aaPredicted RBP11.7□□□□□ -0.54
MRPL55-220ENST00000411464 PPP1R14DQ9NXH3 145 aa11.7□□□□□ -0.54
MRPL55-220ENST00000411464 LINC00588Q9Y4M8 146 aa11.7□□□□□ -0.54
MRPL55-220ENST00000411464 TRAV8-2A0A0B4J237 113 aa11.69□□□□□ -0.54
MRPL55-220ENST00000411464 DUXBA0A1W2PPF3 345 aa11.69□□□□□ -0.54
MRPL55-220ENST00000411464 BOLA2-SMG1P6H3BVE0 249 aa11.69□□□□□ -0.54
MRPL55-220ENST00000411464 HTN1P15515 57 aa11.69□□□□□ -0.54
MRPL55-220ENST00000411464 GATA2P23769 480 aaPredicted RBP11.69□□□□□ -0.54
MRPL55-220ENST00000411464 RHOBP62745 196 aa11.69□□□□□ -0.54
MRPL55-220ENST00000411464 Q8N1X5 172 aa11.69□□□□□ -0.54
MRPL55-220ENST00000411464 TMEM256Q8N2U0 113 aa11.69□□□□□ -0.54
MRPL55-220ENST00000411464 SLC25A39Q9BZJ4 359 aaPredicted RBP11.69□□□□□ -0.54
MRPL55-220ENST00000411464 HSPG2P98160 4391 aa11.69□□□□□ -0.54
MRPL55-220ENST00000411464 NACAE9PAV3 2078 aa11.68□□□□□ -0.54
MRPL55-220ENST00000411464 PLAC8L1A1L4L8 177 aa11.68□□□□□ -0.54
MRPL55-220ENST00000411464 TAS2R60P59551 318 aa11.68□□□□□ -0.54
MRPL55-220ENST00000411464 AKR1C1Q04828 323 aa11.68□□□□□ -0.54
MRPL55-220ENST00000411464 ZNF846Q147U1 533 aa11.68□□□□□ -0.54
MRPL55-220ENST00000411464 TMEM182Q6ZP80 229 aaPredicted RBP11.68□□□□□ -0.54
MRPL55-220ENST00000411464 SSX7Q7RTT5 188 aa11.68□□□□□ -0.54
MRPL55-220ENST00000411464 SPATA12Q7Z6I5 190 aa11.68□□□□□ -0.54
MRPL55-220ENST00000411464 RNF141Q8WVD5 230 aa11.68□□□□□ -0.54
MRPL55-220ENST00000411464 TRIM63Q969Q1 353 aa11.68□□□□□ -0.54
MRPL55-220ENST00000411464 Q9H8V8 135 aa11.68□□□□□ -0.54
MRPL55-220ENST00000411464 TIMM8BQ9Y5J9 83 aaPredicted RBP11.68□□□□□ -0.54
MRPL55-220ENST00000411464 WRBO00258 174 aa11.67□□□□□ -0.54
MRPL55-220ENST00000411464 SLC25A6P12236 298 aa11.67□□□□□ -0.54
MRPL55-220ENST00000411464 HIST1H1AQ02539 215 aaPredicted RBP11.67□□□□□ -0.54
MRPL55-220ENST00000411464 BAK1Q16611 211 aa11.67□□□□□ -0.54
MRPL55-220ENST00000411464 TMED4Q7Z7H5 227 aa11.67□□□□□ -0.54
MRPL55-220ENST00000411464 C16orf74Q96GX8 76 aa11.67□□□□□ -0.54
MRPL55-220ENST00000411464 SCRT2Q9NQ03 307 aa11.67□□□□□ -0.54
MRPL55-220ENST00000411464 PRSS46E5RG02 174 aa11.66□□□□□ -0.54
MRPL55-220ENST00000411464 SYNGR2O43760 224 aa11.66□□□□□ -0.54
MRPL55-220ENST00000411464 RPL7P18124 248 aaKnown RBP11.66□□□□□ -0.54
MRPL55-220ENST00000411464 RAP2BP61225 183 aa11.66□□□□□ -0.54
MRPL55-220ENST00000411464 TMEM128Q5BJH2 165 aa11.66□□□□□ -0.54
MRPL55-220ENST00000411464 SPANXN5Q5MJ07 72 aa11.66□□□□□ -0.54
MRPL55-220ENST00000411464 TRIQKQ629K1 86 aa11.66□□□□□ -0.54
MRPL55-220ENST00000411464 TMEM144Q7Z5S9 345 aa11.66□□□□□ -0.54
MRPL55-220ENST00000411464 LRRC20Q8TCA0 184 aa11.66□□□□□ -0.54
MRPL55-220ENST00000411464 IL5P05113 134 aa11.65□□□□□ -0.54
MRPL55-220ENST00000411464 IL7P13232 177 aa11.65□□□□□ -0.54
MRPL55-220ENST00000411464 VAMP1P23763 118 aa11.65□□□□□ -0.54
MRPL55-220ENST00000411464 TTC32Q5I0X7 151 aa11.65□□□□□ -0.54
MRPL55-220ENST00000411464 ZNF493Q6ZR52 646 aa11.65□□□□□ -0.54
MRPL55-220ENST00000411464 TOMM5Q8N4H5 51 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms