RNA–Protein interactions for RNA: ENST00000406757.2

GPC3-203, Transcript of glypican 3, humanhuman

TSL 2

Gene GPC3, Length 836 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-203ENST00000406757 M6PRP20645 277 aa6.33□□□□□ -1.4
GPC3-203ENST00000406757 NPPCP23582 126 aa6.33□□□□□ -1.4
GPC3-203ENST00000406757 FGF8P55075 233 aaPredicted RBP6.33□□□□□ -1.4
GPC3-203ENST00000406757 PLP1P60201 277 aa6.33□□□□□ -1.4
GPC3-203ENST00000406757 SERF2P84101 59 aa6.33□□□□□ -1.4
GPC3-203ENST00000406757 ZNF726P1Q15940 193 aa6.33□□□□□ -1.4
GPC3-203ENST00000406757 TMEM41BQ5BJD5 291 aa6.33□□□□□ -1.4
GPC3-203ENST00000406757 TEX261Q6UWH6 196 aa6.33□□□□□ -1.4
GPC3-203ENST00000406757 LCN15Q6UWW0 184 aa6.33□□□□□ -1.4
GPC3-203ENST00000406757 IL34Q6ZMJ4 242 aa6.33□□□□□ -1.4
GPC3-203ENST00000406757 KRTAP19-1Q8IUB9 90 aa6.33□□□□□ -1.4
GPC3-203ENST00000406757 RPP25LQ8N5L8 163 aaKnown RBP6.33□□□□□ -1.4
GPC3-203ENST00000406757 ZNF680Q8NEM1 530 aa6.33□□□□□ -1.4
GPC3-203ENST00000406757 OR4F17Q8NGA8 305 aa6.33□□□□□ -1.4
GPC3-203ENST00000406757 OR9G4Q8NGQ1 327 aa6.33□□□□□ -1.4
GPC3-203ENST00000406757 OR1L4Q8NGR5 311 aa6.33□□□□□ -1.4
GPC3-203ENST00000406757 OR4F4Q96R69 305 aa6.33□□□□□ -1.4
GPC3-203ENST00000406757 METTL26Q96S19 204 aa6.33□□□□□ -1.4
GPC3-203ENST00000406757 SLC25A39Q9BZJ4 359 aaPredicted RBP6.33□□□□□ -1.4
GPC3-203ENST00000406757 KCNIP2Q9NS61 270 aa6.33□□□□□ -1.4
GPC3-203ENST00000406757 UFC1Q9Y3C8 167 aa6.33□□□□□ -1.4
GPC3-203ENST00000406757 NBEAL2Q6ZNJ1 2754 aa6.32□□□□□ -1.4
GPC3-203ENST00000406757 IGHV7-4-1A0A0J9YVY3 117 aa6.32□□□□□ -1.4
GPC3-203ENST00000406757 A0A1W2PPV4 95 aa6.32□□□□□ -1.4
GPC3-203ENST00000406757 ZNF98A6NK75 572 aa6.32□□□□□ -1.4
GPC3-203ENST00000406757 FAM229AH3BQW9 127 aa6.32□□□□□ -1.4
GPC3-203ENST00000406757 H3BRN7 92 aa6.32□□□□□ -1.4
GPC3-203ENST00000406757 LGALS9O00182 355 aa6.32□□□□□ -1.4
GPC3-203ENST00000406757 CHEK1O14757 476 aa6.32□□□□□ -1.4
GPC3-203ENST00000406757 H2AFB1P0C5Y9 115 aa6.32□□□□□ -1.4
GPC3-203ENST00000406757 PYYP10082 97 aa6.32□□□□□ -1.4
GPC3-203ENST00000406757 PRB4P10163 310 aaPredicted RBP6.32□□□□□ -1.4
GPC3-203ENST00000406757 FOLR2P14207 255 aa6.32□□□□□ -1.4
GPC3-203ENST00000406757 IGLL1P15814 213 aa6.32□□□□□ -1.4
GPC3-203ENST00000406757 CBLN1P23435 193 aa6.32□□□□□ -1.4
GPC3-203ENST00000406757 LINC00482Q8N8I6 264 aa6.32□□□□□ -1.4
GPC3-203ENST00000406757 GATAD1Q8WUU5 269 aa6.32□□□□□ -1.4
GPC3-203ENST00000406757 RAB24Q969Q5 203 aa6.32□□□□□ -1.4
GPC3-203ENST00000406757 SHANK2-AS3Q9BTD1 123 aa6.32□□□□□ -1.4
GPC3-203ENST00000406757 ELOVL1Q9BW60 279 aa6.32□□□□□ -1.4
GPC3-203ENST00000406757 RHPN1-AS1Q9BWJ2 59 aa6.32□□□□□ -1.4
GPC3-203ENST00000406757 SLC25A2Q9BXI2 301 aa6.32□□□□□ -1.4
GPC3-203ENST00000406757 ACTR3CQ9C0K3 210 aaPredicted RBP6.32□□□□□ -1.4
GPC3-203ENST00000406757 TMPRSS5Q9H3S3 457 aa6.32□□□□□ -1.4
GPC3-203ENST00000406757 SMPXQ9UHP9 88 aa6.32□□□□□ -1.4
GPC3-203ENST00000406757 FUT9Q9Y231 359 aa6.32□□□□□ -1.4
GPC3-203ENST00000406757 U3KQE9 123 aa6.32□□□□□ -1.4
GPC3-203ENST00000406757 ZNF705EA8MWA4 302 aaPredicted RBP6.31□□□□□ -1.4
GPC3-203ENST00000406757 TEX46H3BTG2 121 aa6.31□□□□□ -1.4
GPC3-203ENST00000406757 K7EMT4 169 aa6.31□□□□□ -1.4
GPC3-203ENST00000406757 BUB3O43684 328 aa6.31□□□□□ -1.4
GPC3-203ENST00000406757 MBP02144 154 aa6.31□□□□□ -1.4
GPC3-203ENST00000406757 CRYBB3P26998 211 aa6.31□□□□□ -1.4
GPC3-203ENST00000406757 CDC34P49427 236 aaPredicted RBP6.31□□□□□ -1.4
GPC3-203ENST00000406757 SULT1A2P50226 295 aa6.31□□□□□ -1.4
GPC3-203ENST00000406757 RHOBP62745 196 aa6.31□□□□□ -1.4
GPC3-203ENST00000406757 CCL20P78556 96 aa6.31□□□□□ -1.4
GPC3-203ENST00000406757 PXDC1Q5TGL8 231 aa6.31□□□□□ -1.4
GPC3-203ENST00000406757 EIF5AL1Q6IS14 154 aaKnown RBP6.31□□□□□ -1.4
GPC3-203ENST00000406757 WFDC3Q8IUB2 231 aa6.31□□□□□ -1.4
GPC3-203ENST00000406757 IQCF2Q8IXL9 164 aa6.31□□□□□ -1.4
GPC3-203ENST00000406757 GBGT1Q8N5D6 347 aa6.31□□□□□ -1.4
GPC3-203ENST00000406757 ZNF503Q96F45 646 aa6.31□□□□□ -1.4
GPC3-203ENST00000406757 FAM167A-AS1Q96KT0 104 aa6.31□□□□□ -1.4
GPC3-203ENST00000406757 C17orf77Q96MU5 243 aa6.31□□□□□ -1.4
GPC3-203ENST00000406757 PFDN5Q99471 154 aa6.31□□□□□ -1.4
GPC3-203ENST00000406757 RNF2Q99496 336 aa6.31□□□□□ -1.4
GPC3-203ENST00000406757 DAZ1Q9NQZ3 744 aaKnown RBP6.31□□□□□ -1.4
GPC3-203ENST00000406757 PEMTQ9UBM1 199 aa6.31□□□□□ -1.4
GPC3-203ENST00000406757 MLXQ9UH92 298 aa6.31□□□□□ -1.4
GPC3-203ENST00000406757 SMAD5-AS1Q9Y6J3 95 aa6.31□□□□□ -1.4
GPC3-203ENST00000406757 TMEM238LA0A1B0GVL6 79 aa6.3□□□□□ -1.4
GPC3-203ENST00000406757 A8MWP6 167 aa6.3□□□□□ -1.4
GPC3-203ENST00000406757 K7EIL1 84 aa6.3□□□□□ -1.4
GPC3-203ENST00000406757 SAP30O75446 220 aa6.3□□□□□ -1.4
GPC3-203ENST00000406757 IFNA7P01567 189 aa6.3□□□□□ -1.4
GPC3-203ENST00000406757 OR10J4P0C629 311 aa6.3□□□□□ -1.4
GPC3-203ENST00000406757 C8orf88P0DMB2 117 aa6.3□□□□□ -1.4
GPC3-203ENST00000406757 TFPI2P48307 235 aa6.3□□□□□ -1.4
GPC3-203ENST00000406757 RPL11P62913 178 aaKnown RBP6.3□□□□□ -1.4
GPC3-203ENST00000406757 IGFL4Q6B9Z1 124 aa6.3□□□□□ -1.4
GPC3-203ENST00000406757 C16orf54Q6UWD8 224 aa6.3□□□□□ -1.4
GPC3-203ENST00000406757 OR8I2Q8N0Y5 310 aa6.3□□□□□ -1.4
GPC3-203ENST00000406757 SFT2D1Q8WV19 159 aa6.3□□□□□ -1.4
GPC3-203ENST00000406757 RNF141Q8WVD5 230 aa6.3□□□□□ -1.4
GPC3-203ENST00000406757 PHYHIPLQ96FC7 376 aa6.3□□□□□ -1.4
GPC3-203ENST00000406757 TECRQ9NZ01 308 aaKnown RBP6.3□□□□□ -1.4
GPC3-203ENST00000406757 UBQLN2Q9UHD9 624 aa6.3□□□□□ -1.4
GPC3-203ENST00000406757 CTXND1A0A1B0GTU2 59 aa6.29□□□□□ -1.4
GPC3-203ENST00000406757 MAP1LC3B2A6NCE7 125 aa6.29□□□□□ -1.4
GPC3-203ENST00000406757 IZUMO1RA6ND01 250 aa6.29□□□□□ -1.4
GPC3-203ENST00000406757 ZNF785A8K8V0 405 aa6.29□□□□□ -1.4
GPC3-203ENST00000406757 SEC14L6B5MCN3 397 aa6.29□□□□□ -1.4
GPC3-203ENST00000406757 UMAD1C9J7I0 102 aa6.29□□□□□ -1.4
GPC3-203ENST00000406757 H3BQ15 152 aa6.29□□□□□ -1.4
GPC3-203ENST00000406757 OR7C2O60412 319 aa6.29□□□□□ -1.4
GPC3-203ENST00000406757 ARL14EPLP0DKL9 152 aa6.29□□□□□ -1.4
GPC3-203ENST00000406757 COL7A1Q02388 2944 aa6.29□□□□□ -1.4
GPC3-203ENST00000406757 DEFB114Q30KQ6 69 aa6.29□□□□□ -1.4
GPC3-203ENST00000406757 DEFB121Q5J5C9 76 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms