RNA–Protein interactions for RNA: ENST00000393119.6

MKS1-202, Transcript of Meckel syndrome, type 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MKS1, Length 2,397 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-202ENST00000393119 OR5AU1Q8NGC0 362 aa11.72□□□□□ -0.53
MKS1-202ENST00000393119 C20orf144Q9BQM9 153 aa11.72□□□□□ -0.53
MKS1-202ENST00000393119 KCNIP2Q9NS61 270 aa11.72□□□□□ -0.53
MKS1-202ENST00000393119 NAGKQ9UJ70 344 aa11.72□□□□□ -0.53
MKS1-202ENST00000393119 HNF1AP20823 631 aa11.72□□□□□ -0.53
MKS1-202ENST00000393119 LYZP61626 148 aa11.72□□□□□ -0.53
MKS1-202ENST00000393119 TMEM249Q2WGJ8 235 aa11.72□□□□□ -0.53
MKS1-202ENST00000393119 ETFRF1Q6IPR1 90 aa11.72□□□□□ -0.53
MKS1-202ENST00000393119 MEGF9Q9H1U4 602 aa11.72□□□□□ -0.53
MKS1-202ENST00000393119 MANBALQ9NQG1 85 aa11.72□□□□□ -0.53
MKS1-202ENST00000393119 C1RLQ9NZP8 487 aa11.72□□□□□ -0.53
MKS1-202ENST00000393119 UNC79Q9P2D8 2635 aa11.72□□□□□ -0.53
MKS1-202ENST00000393119 CR1P17927 2039 aa11.72□□□□□ -0.53
MKS1-202ENST00000393119 A0A1W2PPQ1 181 aa11.71□□□□□ -0.53
MKS1-202ENST00000393119 RPLP1P05386 114 aaKnown RBP11.71□□□□□ -0.53
MKS1-202ENST00000393119 DEFB112Q30KQ8 113 aa11.71□□□□□ -0.53
MKS1-202ENST00000393119 ANKRD39Q53RE8 183 aa11.71□□□□□ -0.53
MKS1-202ENST00000393119 SONP18583 2426 aaKnown RBP11.71□□□□□ -0.53
MKS1-202ENST00000393119 OR2T8A6NH00 312 aa11.71□□□□□ -0.54
MKS1-202ENST00000393119 NPIPB5A8MRT5 1133 aa11.71□□□□□ -0.54
MKS1-202ENST00000393119 SMAD7O15105 426 aaKnown RBP11.71□□□□□ -0.54
MKS1-202ENST00000393119 IL17RELQ6ZVW7 336 aa11.71□□□□□ -0.54
MKS1-202ENST00000393119 TRGV9Q99603 122 aa11.71□□□□□ -0.54
MKS1-202ENST00000393119 FASNP49327 2511 aaKnown RBP11.71□□□□□ -0.54
MKS1-202ENST00000393119 CORTO00230 105 aa11.7□□□□□ -0.54
MKS1-202ENST00000393119 C8orf88P0DMB2 117 aa11.7□□□□□ -0.54
MKS1-202ENST00000393119 TEX43Q6ZNM6 134 aa11.7□□□□□ -0.54
MKS1-202ENST00000393119 LCNL1Q6ZST4 164 aa11.7□□□□□ -0.54
MKS1-202ENST00000393119 SGMS2Q8NHU3 365 aa11.7□□□□□ -0.54
MKS1-202ENST00000393119 TECRQ9NZ01 308 aaKnown RBP11.7□□□□□ -0.54
MKS1-202ENST00000393119 NUPR1O60356 82 aa11.7□□□□□ -0.54
MKS1-202ENST00000393119 IGHV4-59P01825 116 aa11.7□□□□□ -0.54
MKS1-202ENST00000393119 SRSF8Q9BRL6 282 aaKnown RBP11.7□□□□□ -0.54
MKS1-202ENST00000393119 FBXL7Q9UJT9 491 aa11.7□□□□□ -0.54
MKS1-202ENST00000393119 ACANP16112 2415 aa11.69□□□□□ -0.54
MKS1-202ENST00000393119 TRBV20OR9-2A0A075B6H5 130 aa11.69□□□□□ -0.54
MKS1-202ENST00000393119 GGTLC3B5MD39 225 aa11.69□□□□□ -0.54
MKS1-202ENST00000393119 LOXL1Q08397 574 aaPredicted RBP11.69□□□□□ -0.54
MKS1-202ENST00000393119 TMEM95Q3KNT9 176 aa11.69□□□□□ -0.54
MKS1-202ENST00000393119 TMEM256Q8N2U0 113 aa11.69□□□□□ -0.54
MKS1-202ENST00000393119 BLNKQ8WV28 456 aa11.69□□□□□ -0.54
MKS1-202ENST00000393119 CHRDL1Q9BU40 450 aa11.69□□□□□ -0.54
MKS1-202ENST00000393119 BEX4Q9NWD9 120 aaPredicted RBP11.69□□□□□ -0.54
MKS1-202ENST00000393119 FLNAP21333 2647 aaKnown RBP11.69□□□□□ -0.54
MKS1-202ENST00000393119 CD99P14209 185 aa11.69□□□□□ -0.54
MKS1-202ENST00000393119 Q56UQ5 140 aa11.69□□□□□ -0.54
MKS1-202ENST00000393119 MOB4Q9Y3A3 225 aa11.69□□□□□ -0.54
MKS1-202ENST00000393119 ESDP10768 282 aa11.68□□□□□ -0.54
MKS1-202ENST00000393119 SUMO1P63165 101 aaKnown RBP11.68□□□□□ -0.54
MKS1-202ENST00000393119 UBE2L3P68036 154 aaKnown RBP11.68□□□□□ -0.54
MKS1-202ENST00000393119 LINC00479Q96M42 142 aa11.68□□□□□ -0.54
MKS1-202ENST00000393119 DUX5Q96PT3 197 aa11.68□□□□□ -0.54
MKS1-202ENST00000393119 A6NDX4 124 aa11.68□□□□□ -0.54
MKS1-202ENST00000393119 SCGB1D1O95968 90 aa11.68□□□□□ -0.54
MKS1-202ENST00000393119 CRYBB3P26998 211 aa11.68□□□□□ -0.54
MKS1-202ENST00000393119 LINC00310P59036 64 aa11.68□□□□□ -0.54
MKS1-202ENST00000393119 C21orf62-AS1Q17RA5 79 aa11.68□□□□□ -0.54
MKS1-202ENST00000393119 C15orf32Q32M92 178 aa11.68□□□□□ -0.54
MKS1-202ENST00000393119 MIEN1Q9BRT3 115 aa11.68□□□□□ -0.54
MKS1-202ENST00000393119 TP53TG3Q9ULZ0 132 aa11.68□□□□□ -0.54
MKS1-202ENST00000393119 A0A1B0GUS0 222 aa11.67□□□□□ -0.54
MKS1-202ENST00000393119 GNG7O60262 68 aa11.67□□□□□ -0.54
MKS1-202ENST00000393119 HYPMO75409 117 aa11.67□□□□□ -0.54
MKS1-202ENST00000393119 SELENOTP62341 195 aa11.67□□□□□ -0.54
MKS1-202ENST00000393119 RHOGP84095 191 aa11.67□□□□□ -0.54
MKS1-202ENST00000393119 FXYD5Q96DB9 178 aa11.67□□□□□ -0.54
MKS1-202ENST00000393119 PAXXQ9BUH6 204 aa11.67□□□□□ -0.54
MKS1-202ENST00000393119 C21orf62Q9NYP8 219 aa11.67□□□□□ -0.54
MKS1-202ENST00000393119 IL4P05112 153 aa11.67□□□□□ -0.54
MKS1-202ENST00000393119 ADMP35318 185 aa11.67□□□□□ -0.54
MKS1-202ENST00000393119 ZNF414Q96IQ9 312 aa11.67□□□□□ -0.54
MKS1-202ENST00000393119 SGK494Q96LW2 274 aa11.67□□□□□ -0.54
MKS1-202ENST00000393119 PCP4P48539 62 aa11.66□□□□□ -0.54
MKS1-202ENST00000393119 YPEL3P61236 119 aaPredicted RBP11.66□□□□□ -0.54
MKS1-202ENST00000393119 RANP62826 216 aaKnown RBP11.66□□□□□ -0.54
MKS1-202ENST00000393119 FOXL1Q12952 345 aa11.66□□□□□ -0.54
MKS1-202ENST00000393119 ZNF491Q8N8L2 437 aa11.66□□□□□ -0.54
MKS1-202ENST00000393119 OR1L4Q8NGR5 311 aa11.66□□□□□ -0.54
MKS1-202ENST00000393119 C17orf77Q96MU5 243 aa11.66□□□□□ -0.54
MKS1-202ENST00000393119 ZNF48Q96MX3 618 aaPredicted RBP11.66□□□□□ -0.54
MKS1-202ENST00000393119 CTSGP08311 255 aa11.65□□□□□ -0.54
MKS1-202ENST00000393119 GPR183P32249 361 aa11.65□□□□□ -0.54
MKS1-202ENST00000393119 BPIFB3P59826 476 aa11.65□□□□□ -0.54
MKS1-202ENST00000393119 KCNIP4Q6PIL6 250 aa11.65□□□□□ -0.54
MKS1-202ENST00000393119 PQLC2Q6ZP29 291 aa11.65□□□□□ -0.54
MKS1-202ENST00000393119 Q6ZWC4 215 aa11.65□□□□□ -0.54
MKS1-202ENST00000393119 LINC01551Q86U37 167 aa11.65□□□□□ -0.54
MKS1-202ENST00000393119 FAM110DQ8TAY7 271 aaPredicted RBP11.65□□□□□ -0.54
MKS1-202ENST00000393119 BTF3L4Q96K17 158 aa11.65□□□□□ -0.54
MKS1-202ENST00000393119 MFAP4P55083 255 aa11.65□□□□□ -0.54
MKS1-202ENST00000393119 TAS2R45P59539 299 aa11.65□□□□□ -0.54
MKS1-202ENST00000393119 GNG5P63218 68 aa11.65□□□□□ -0.54
MKS1-202ENST00000393119 TDRG1Q3Y452 100 aa11.65□□□□□ -0.54
MKS1-202ENST00000393119 C10orf99Q6UWK7 81 aa11.65□□□□□ -0.54
MKS1-202ENST00000393119 SLC25A39Q9BZJ4 359 aaPredicted RBP11.65□□□□□ -0.54
MKS1-202ENST00000393119 NOTCH2Q04721 2471 aa11.65□□□□□ -0.55
MKS1-202ENST00000393119 CLEC3BP05452 202 aa11.64□□□□□ -0.55
MKS1-202ENST00000393119 CLEC19AQ6UXS0 136 aa11.64□□□□□ -0.55
MKS1-202ENST00000393119 LRRC75A-AS1Q8N1F1 130 aa11.64□□□□□ -0.55
MKS1-202ENST00000393119 MRPL32Q9BYC8 188 aaKnown RBP11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms