RNA–Protein interactions for RNA: ENST00000344726.9

HMGN3-202, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN3, Length 872 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-202ENST00000344726 ID1P41134 155 aa10.44□□□□□ -0.74
HMGN3-202ENST00000344726 PLP1P60201 277 aa10.44□□□□□ -0.74
HMGN3-202ENST00000344726 SLC38A11Q08AI6 406 aa10.44□□□□□ -0.74
HMGN3-202ENST00000344726 IL15RAQ13261 267 aa10.44□□□□□ -0.74
HMGN3-202ENST00000344726 ZNF846Q147U1 533 aa10.44□□□□□ -0.74
HMGN3-202ENST00000344726 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.44□□□□□ -0.74
HMGN3-202ENST00000344726 C11orf45Q8TAV5 145 aa10.44□□□□□ -0.74
HMGN3-202ENST00000344726 RSG1Q9BU20 258 aa10.44□□□□□ -0.74
HMGN3-202ENST00000344726 TMEM147Q9BVK8 224 aa10.44□□□□□ -0.74
HMGN3-202ENST00000344726 SLC25A39Q9BZJ4 359 aaPredicted RBP10.44□□□□□ -0.74
HMGN3-202ENST00000344726 NPVFQ9HCQ7 196 aa10.44□□□□□ -0.74
HMGN3-202ENST00000344726 PTTG2Q9NZH5 202 aa10.44□□□□□ -0.74
HMGN3-202ENST00000344726 XCL2Q9UBD3 114 aa10.44□□□□□ -0.74
HMGN3-202ENST00000344726 LSM5Q9Y4Y9 91 aaKnown RBP10.44□□□□□ -0.74
HMGN3-202ENST00000344726 UPK1BO75841 260 aa10.43□□□□□ -0.74
HMGN3-202ENST00000344726 IGKV3-20P01619 116 aa10.43□□□□□ -0.74
HMGN3-202ENST00000344726 GALR1P47211 349 aa10.43□□□□□ -0.74
HMGN3-202ENST00000344726 FXYD7P58549 80 aa10.43□□□□□ -0.74
HMGN3-202ENST00000344726 MZT2BQ6NZ67 158 aa10.43□□□□□ -0.74
HMGN3-202ENST00000344726 PATE2Q6UY27 113 aa10.43□□□□□ -0.74
HMGN3-202ENST00000344726 FOXI2Q6ZQN5 318 aa10.43□□□□□ -0.74
HMGN3-202ENST00000344726 C2orf50Q96LR7 162 aa10.43□□□□□ -0.74
HMGN3-202ENST00000344726 UHRF2Q96PU4 802 aa10.43□□□□□ -0.74
HMGN3-202ENST00000344726 SHANK2-AS3Q9BTD1 123 aa10.43□□□□□ -0.74
HMGN3-202ENST00000344726 MGAT4CQ9UBM8 478 aa10.43□□□□□ -0.74
HMGN3-202ENST00000344726 DNAH6Q9C0G6 4158 aa10.42□□□□□ -0.74
HMGN3-202ENST00000344726 ELOA3CA0A087WX78 387 aaPredicted RBP10.42□□□□□ -0.74
HMGN3-202ENST00000344726 L7N2F9 121 aa10.42□□□□□ -0.74
HMGN3-202ENST00000344726 HYPMO75409 117 aa10.42□□□□□ -0.74
HMGN3-202ENST00000344726 MIFP14174 115 aa10.42□□□□□ -0.74
HMGN3-202ENST00000344726 SELENOTP62341 195 aa10.42□□□□□ -0.74
HMGN3-202ENST00000344726 VAMP2P63027 116 aa10.42□□□□□ -0.74
HMGN3-202ENST00000344726 IGFL4Q6B9Z1 124 aa10.42□□□□□ -0.74
HMGN3-202ENST00000344726 TEPPQ6URK8 271 aa10.42□□□□□ -0.74
HMGN3-202ENST00000344726 ZNF709Q8N972 641 aa10.42□□□□□ -0.74
HMGN3-202ENST00000344726 C16orf92Q96LL3 132 aa10.42□□□□□ -0.74
HMGN3-202ENST00000344726 HIGD1AQ9Y241 93 aa10.42□□□□□ -0.74
HMGN3-202ENST00000344726 TRAV8-2A0A0B4J237 113 aa10.41□□□□□ -0.74
HMGN3-202ENST00000344726 A0A0J9YX75 114 aa10.41□□□□□ -0.74
HMGN3-202ENST00000344726 FAM24AA6NFZ4 105 aa10.41□□□□□ -0.74
HMGN3-202ENST00000344726 AGPAT2O15120 278 aa10.41□□□□□ -0.74
HMGN3-202ENST00000344726 DEDDO75618 318 aa10.41□□□□□ -0.74
HMGN3-202ENST00000344726 OR5G3P0C626 314 aa10.41□□□□□ -0.74
HMGN3-202ENST00000344726 MEOX2P50222 304 aa10.41□□□□□ -0.74
HMGN3-202ENST00000344726 RAP2BP61225 183 aa10.41□□□□□ -0.74
HMGN3-202ENST00000344726 NUTF2P61970 127 aaKnown RBP10.41□□□□□ -0.74
HMGN3-202ENST00000344726 GPR82Q96P67 336 aa10.41□□□□□ -0.74
HMGN3-202ENST00000344726 MGST2Q99735 147 aa10.41□□□□□ -0.74
HMGN3-202ENST00000344726 GGACTQ9BVM4 153 aa10.41□□□□□ -0.74
HMGN3-202ENST00000344726 ARL6Q9H0F7 186 aa10.41□□□□□ -0.74
HMGN3-202ENST00000344726 SLC35B3Q9H1N7 401 aa10.41□□□□□ -0.74
HMGN3-202ENST00000344726 KLK5Q9Y337 293 aaPredicted RBP10.41□□□□□ -0.74
HMGN3-202ENST00000344726 CST7O76096 145 aa10.4□□□□□ -0.74
HMGN3-202ENST00000344726 BCAP31P51572 246 aa10.4□□□□□ -0.74
HMGN3-202ENST00000344726 CAV2P51636 162 aa10.4□□□□□ -0.74
HMGN3-202ENST00000344726 RAB32Q13637 225 aa10.4□□□□□ -0.74
HMGN3-202ENST00000344726 FAM78BQ5VT40 261 aa10.4□□□□□ -0.74
HMGN3-202ENST00000344726 ZNF705AQ6ZN79 300 aaPredicted RBP10.4□□□□□ -0.74
HMGN3-202ENST00000344726 NRARPQ7Z6K4 114 aa10.4□□□□□ -0.74
HMGN3-202ENST00000344726 RPP25LQ8N5L8 163 aaKnown RBP10.4□□□□□ -0.74
HMGN3-202ENST00000344726 RNF182Q8N6D2 247 aa10.4□□□□□ -0.74
HMGN3-202ENST00000344726 OR4B1Q8NGF8 309 aa10.4□□□□□ -0.74
HMGN3-202ENST00000344726 ENKURQ8TC29 256 aa10.4□□□□□ -0.74
HMGN3-202ENST00000344726 CLUHP3Q96NS8 147 aa10.4□□□□□ -0.74
HMGN3-202ENST00000344726 C1QTNF4Q9BXJ3 329 aa10.4□□□□□ -0.74
HMGN3-202ENST00000344726 MFFQ9GZY8 342 aa10.4□□□□□ -0.74
HMGN3-202ENST00000344726 IGSF23A1L1A6 192 aa10.39□□□□□ -0.75
HMGN3-202ENST00000344726 MRPS12O15235 138 aaKnown RBP10.39□□□□□ -0.75
HMGN3-202ENST00000344726 S100A10P60903 97 aa10.39□□□□□ -0.75
HMGN3-202ENST00000344726 SAMD13Q5VXD3 122 aa10.39□□□□□ -0.75
HMGN3-202ENST00000344726 ZNF546Q86UE3 836 aa10.39□□□□□ -0.75
HMGN3-202ENST00000344726 ARV1Q9H2C2 271 aa10.39□□□□□ -0.75
HMGN3-202ENST00000344726 HRH4Q9H3N8 390 aa10.39□□□□□ -0.75
HMGN3-202ENST00000344726 RPRMQ9NS64 109 aa10.39□□□□□ -0.75
HMGN3-202ENST00000344726 LYRM2Q9NU23 88 aaPredicted RBP10.39□□□□□ -0.75
HMGN3-202ENST00000344726 CELA1Q9UNI1 258 aa10.39□□□□□ -0.75
HMGN3-202ENST00000344726 A8MTW9 85 aa10.38□□□□□ -0.75
HMGN3-202ENST00000344726 ZNF705FA8MVS1 300 aaPredicted RBP10.38□□□□□ -0.75
HMGN3-202ENST00000344726 GOSR2O14653 212 aa10.38□□□□□ -0.75
HMGN3-202ENST00000344726 SIX6O95475 246 aa10.38□□□□□ -0.75
HMGN3-202ENST00000344726 ZNF705DP0CH99 300 aaPredicted RBP10.38□□□□□ -0.75
HMGN3-202ENST00000344726 ZNF705BP0CI00 300 aaPredicted RBP10.38□□□□□ -0.75
HMGN3-202ENST00000344726 RPL7P18124 248 aaKnown RBP10.38□□□□□ -0.75
HMGN3-202ENST00000344726 HLA-DMBP28068 263 aa10.38□□□□□ -0.75
HMGN3-202ENST00000344726 S100A7P31151 101 aa10.38□□□□□ -0.75
HMGN3-202ENST00000344726 FGL1Q08830 312 aa10.38□□□□□ -0.75
HMGN3-202ENST00000344726 MORN5Q5VZ52 161 aa10.38□□□□□ -0.75
HMGN3-202ENST00000344726 SPATA31B1PQ5VZV4 182 aa10.38□□□□□ -0.75
HMGN3-202ENST00000344726 EBLN2Q6P2I7 272 aa10.38□□□□□ -0.75
HMGN3-202ENST00000344726 AMTNQ6UX39 209 aa10.38□□□□□ -0.75
HMGN3-202ENST00000344726 TMEM37Q8WXS4 190 aa10.38□□□□□ -0.75
HMGN3-202ENST00000344726 A0A087X0K7 114 aa10.37□□□□□ -0.75
HMGN3-202ENST00000344726 PRB4P10163 310 aaPredicted RBP10.37□□□□□ -0.75
HMGN3-202ENST00000344726 PSG9Q00887 426 aa10.37□□□□□ -0.75
HMGN3-202ENST00000344726 VWC2Q2TAL6 325 aa10.37□□□□□ -0.75
HMGN3-202ENST00000344726 Q6ZTC4 211 aa10.37□□□□□ -0.75
HMGN3-202ENST00000344726 LINC00305Q7Z4B0 112 aa10.37□□□□□ -0.75
HMGN3-202ENST00000344726 TMEM252Q8N6L7 170 aa10.37□□□□□ -0.75
HMGN3-202ENST00000344726 WDR83OSQ9Y284 106 aa10.37□□□□□ -0.75
HMGN3-202ENST00000344726 IGHV3OR16-12A0A075B7B8 117 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 110.5 ms