RNA–Protein interactions for RNA: ENST00000320081.9

CLIP4-201, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIP4, Length 4,293 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-201ENST00000320081 FOXC2Q99958 501 aa13.39□□□□□ -0.27
CLIP4-201ENST00000320081 ATP5IP56385 69 aaPredicted RBP13.38□□□□□ -0.27
CLIP4-201ENST00000320081 SLC25A48Q6ZT89 311 aaKnown RBP13.38□□□□□ -0.27
CLIP4-201ENST00000320081 EEF1AKMT3Q96AZ1 226 aa13.38□□□□□ -0.27
CLIP4-201ENST00000320081 LAMTOR2Q9Y2Q5 125 aa13.38□□□□□ -0.27
CLIP4-201ENST00000320081 FAM215AQ9Y5M1 114 aa13.38□□□□□ -0.27
CLIP4-201ENST00000320081 PSG9Q00887 426 aa13.38□□□□□ -0.27
CLIP4-201ENST00000320081 TMEM30BQ3MIR4 351 aa13.38□□□□□ -0.27
CLIP4-201ENST00000320081 SAPCD1Q5SSQ6 148 aa13.38□□□□□ -0.27
CLIP4-201ENST00000320081 C12orf54Q6X4T0 127 aa13.38□□□□□ -0.27
CLIP4-201ENST00000320081 CENPVQ7Z7K6 275 aaPredicted RBP13.38□□□□□ -0.27
CLIP4-201ENST00000320081 BEX4Q9NWD9 120 aaPredicted RBP13.38□□□□□ -0.27
CLIP4-201ENST00000320081 SMKR1H3BMG3 65 aa13.37□□□□□ -0.27
CLIP4-201ENST00000320081 NDUFS7O75251 213 aa13.37□□□□□ -0.27
CLIP4-201ENST00000320081 GRNP28799 593 aaKnown RBP13.37□□□□□ -0.27
CLIP4-201ENST00000320081 FAM168AQ92567 244 aa13.37□□□□□ -0.27
CLIP4-201ENST00000320081 VKORC1Q9BQB6 163 aa13.37□□□□□ -0.27
CLIP4-201ENST00000320081 SLC25A39Q9BZJ4 359 aaPredicted RBP13.37□□□□□ -0.27
CLIP4-201ENST00000320081 ZNF256Q9Y2P7 627 aaPredicted RBP13.37□□□□□ -0.27
CLIP4-201ENST00000320081 PFN1P07737 140 aaKnown RBP13.37□□□□□ -0.27
CLIP4-201ENST00000320081 SIGLEC9Q9Y336 463 aa13.37□□□□□ -0.27
CLIP4-201ENST00000320081 WDFY4Q6ZS81 3184 aa13.37□□□□□ -0.27
CLIP4-201ENST00000320081 hDV102S1A0JD36 115 aa13.37□□□□□ -0.27
CLIP4-201ENST00000320081 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.36□□□□□ -0.27
CLIP4-201ENST00000320081 THBDP07204 575 aa13.36□□□□□ -0.27
CLIP4-201ENST00000320081 CACNG7P62955 275 aa13.36□□□□□ -0.27
CLIP4-201ENST00000320081 NUP35Q8NFH5 326 aa13.36□□□□□ -0.27
CLIP4-201ENST00000320081 PIMREGQ9BSJ6 248 aa13.36□□□□□ -0.27
CLIP4-201ENST00000320081 RNASE4P34096 147 aaKnown RBP13.36□□□□□ -0.27
CLIP4-201ENST00000320081 FAM159AQ6UWV7 190 aa13.36□□□□□ -0.27
CLIP4-201ENST00000320081 TMEM242Q9NWH2 141 aa13.36□□□□□ -0.27
CLIP4-201ENST00000320081 LINC00614P0C842 121 aa13.36□□□□□ -0.27
CLIP4-201ENST00000320081 FAM106AQ4KMX7 169 aa13.36□□□□□ -0.27
CLIP4-201ENST00000320081 TMEM170BQ5T4T1 132 aa13.36□□□□□ -0.27
CLIP4-201ENST00000320081 ZNF257Q9Y2Q1 563 aa13.36□□□□□ -0.27
CLIP4-201ENST00000320081 NDUFA3O95167 84 aa13.35□□□□□ -0.27
CLIP4-201ENST00000320081 ID1P41134 155 aa13.35□□□□□ -0.27
CLIP4-201ENST00000320081 ORMDL3Q8N138 153 aa13.35□□□□□ -0.27
CLIP4-201ENST00000320081 A0A1W2PS18 150 aa13.35□□□□□ -0.27
CLIP4-201ENST00000320081 C19orf67A6NJJ6 358 aa13.35□□□□□ -0.27
CLIP4-201ENST00000320081 NUTF2P61970 127 aaKnown RBP13.35□□□□□ -0.27
CLIP4-201ENST00000320081 WT1-ASQ06250 92 aa13.35□□□□□ -0.27
CLIP4-201ENST00000320081 C17orf58Q2M2W7 97 aa13.35□□□□□ -0.27
CLIP4-201ENST00000320081 FMC1Q96HJ9 113 aa13.35□□□□□ -0.27
CLIP4-201ENST00000320081 MIEN1Q9BRT3 115 aa13.35□□□□□ -0.27
CLIP4-201ENST00000320081 EPG5Q9HCE0 2579 aa13.35□□□□□ -0.27
CLIP4-201ENST00000320081 TCRAP04437 139 aa13.35□□□□□ -0.27
CLIP4-201ENST00000320081 C3orf79P0CE67 100 aa13.35□□□□□ -0.27
CLIP4-201ENST00000320081 TMEM167AQ8TBQ9 72 aa13.35□□□□□ -0.27
CLIP4-201ENST00000320081 SSC4DQ8WTU2 575 aa13.35□□□□□ -0.27
CLIP4-201ENST00000320081 LMO1P25800 156 aa13.34□□□□□ -0.27
CLIP4-201ENST00000320081 GGTLC3B5MD39 225 aa13.34□□□□□ -0.27
CLIP4-201ENST00000320081 C8orf46Q8TAG6 207 aa13.34□□□□□ -0.27
CLIP4-201ENST00000320081 TSKUQ8WUA8 353 aa13.34□□□□□ -0.27
CLIP4-201ENST00000320081 COX6B1P14854 86 aa13.34□□□□□ -0.27
CLIP4-201ENST00000320081 JMJD8Q96S16 334 aa13.34□□□□□ -0.27
CLIP4-201ENST00000320081 OTORQ9NRC9 128 aa13.34□□□□□ -0.27
CLIP4-201ENST00000320081 A0A1B0GW64 132 aa13.33□□□□□ -0.27
CLIP4-201ENST00000320081 BPESC1Q9GZL8 116 aa13.33□□□□□ -0.27
CLIP4-201ENST00000320081 VMO1Q7Z5L0 202 aa13.33□□□□□ -0.28
CLIP4-201ENST00000320081 C11orf53Q8IXP5 236 aa13.33□□□□□ -0.28
CLIP4-201ENST00000320081 C15orf65H3BRN8 121 aa13.33□□□□□ -0.28
CLIP4-201ENST00000320081 HERVK_113P61574 105 aa13.33□□□□□ -0.28
CLIP4-201ENST00000320081 SSBP2P81877 361 aaPredicted RBP13.33□□□□□ -0.28
CLIP4-201ENST00000320081 IGKV3D-20A0A0C4DH25 116 aa13.33□□□□□ -0.28
CLIP4-201ENST00000320081 TYMSP04818 313 aa13.33□□□□□ -0.28
CLIP4-201ENST00000320081 DDB2Q92466 427 aa13.33□□□□□ -0.28
CLIP4-201ENST00000320081 BUB1B-PAK6H3BSN5 160 aa13.32□□□□□ -0.28
CLIP4-201ENST00000320081 F2Z2F3 143 aa13.32□□□□□ -0.28
CLIP4-201ENST00000320081 GNB1LQ9BYB4 327 aa13.32□□□□□ -0.28
CLIP4-201ENST00000320081 NUP210Q8TEM1 1887 aaPredicted RBP13.32□□□□□ -0.28
CLIP4-201ENST00000320081 D6R8Y8 96 aa13.32□□□□□ -0.28
CLIP4-201ENST00000320081 VDAC2P45880 294 aaPredicted RBP13.32□□□□□ -0.28
CLIP4-201ENST00000320081 NEU4Q8WWR8 484 aaPredicted RBP13.32□□□□□ -0.28
CLIP4-201ENST00000320081 IGLV3-9A0A075B6K5 115 aa13.31□□□□□ -0.28
CLIP4-201ENST00000320081 FABP5P3A8MUU1 101 aa13.31□□□□□ -0.28
CLIP4-201ENST00000320081 LEPP41159 167 aa13.31□□□□□ -0.28
CLIP4-201ENST00000320081 PLP1P60201 277 aa13.31□□□□□ -0.28
CLIP4-201ENST00000320081 ACTL10Q5JWF8 245 aa13.31□□□□□ -0.28
CLIP4-201ENST00000320081 GNLYP22749 145 aa13.31□□□□□ -0.28
CLIP4-201ENST00000320081 OBSL1O75147 1896 aa13.31□□□□□ -0.28
CLIP4-201ENST00000320081 A0A1B0GWJ7 208 aa13.31□□□□□ -0.28
CLIP4-201ENST00000320081 G3V318 75 aa13.31□□□□□ -0.28
CLIP4-201ENST00000320081 CEACAM4O75871 244 aa13.31□□□□□ -0.28
CLIP4-201ENST00000320081 APOMO95445 188 aa13.31□□□□□ -0.28
CLIP4-201ENST00000320081 LYZL1Q6UWQ5 148 aa13.31□□□□□ -0.28
CLIP4-201ENST00000320081 K7ERU9 68 aa13.3□□□□□ -0.28
CLIP4-201ENST00000320081 CIDEAO60543 219 aa13.3□□□□□ -0.28
CLIP4-201ENST00000320081 FABP2P12104 132 aa13.3□□□□□ -0.28
CLIP4-201ENST00000320081 Q6ZPA2 131 aa13.3□□□□□ -0.28
CLIP4-201ENST00000320081 AMN1Q8IY45 258 aa13.3□□□□□ -0.28
CLIP4-201ENST00000320081 C2orf88Q9BSF0 95 aa13.3□□□□□ -0.28
CLIP4-201ENST00000320081 COL25A1Q9BXS0 654 aaPredicted RBP13.3□□□□□ -0.28
CLIP4-201ENST00000320081 TMEM14BQ9NUH8 114 aa13.3□□□□□ -0.28
CLIP4-201ENST00000320081 H3BUT2 72 aa13.3□□□□□ -0.28
CLIP4-201ENST00000320081 PLA2G2CQ5R387 149 aa13.3□□□□□ -0.28
CLIP4-201ENST00000320081 ITLN2Q8WWU7 325 aaPredicted RBP13.3□□□□□ -0.28
CLIP4-201ENST00000320081 A8MWP6 167 aa13.3□□□□□ -0.28
CLIP4-201ENST00000320081 OR11H12B2RN74 326 aa13.3□□□□□ -0.28
CLIP4-201ENST00000320081 SFTPCP11686 197 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms