RNA–Protein interactions for RNA: ENST00000319854.7

SHROOM1-201, Transcript of shroom family member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SHROOM1, Length 3,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-201ENST00000319854 POU2AF1Q16633 256 aa12.44□□□□□ -0.42
SHROOM1-201ENST00000319854 NDUFA4L2Q9NRX3 87 aa12.44□□□□□ -0.42
SHROOM1-201ENST00000319854 ZNF257Q9Y2Q1 563 aa12.44□□□□□ -0.42
SHROOM1-201ENST00000319854 PKD1L2Q7Z442 2459 aa12.44□□□□□ -0.42
SHROOM1-201ENST00000319854 IGHV1-24A0A0C4DH33 117 aa12.44□□□□□ -0.42
SHROOM1-201ENST00000319854 H0Y8G0 127 aa12.44□□□□□ -0.42
SHROOM1-201ENST00000319854 PYYP10082 97 aa12.44□□□□□ -0.42
SHROOM1-201ENST00000319854 CRXO43186 299 aaPredicted RBP12.44□□□□□ -0.42
SHROOM1-201ENST00000319854 ORM2P19652 201 aa12.44□□□□□ -0.42
SHROOM1-201ENST00000319854 TMEM155Q4W5P6 130 aa12.44□□□□□ -0.42
SHROOM1-201ENST00000319854 Q5PR19 223 aa12.44□□□□□ -0.42
SHROOM1-201ENST00000319854 CGB1A6NKQ9 187 aa12.43□□□□□ -0.42
SHROOM1-201ENST00000319854 OR2J3O76001 311 aa12.43□□□□□ -0.42
SHROOM1-201ENST00000319854 ZNF138P52744 262 aa12.43□□□□□ -0.42
SHROOM1-201ENST00000319854 CD69Q07108 199 aa12.43□□□□□ -0.42
SHROOM1-201ENST00000319854 CRYBG3Q68DQ2 2970 aa12.43□□□□□ -0.42
SHROOM1-201ENST00000319854 TCF24Q7RTU0 167 aa12.43□□□□□ -0.42
SHROOM1-201ENST00000319854 TMEM133Q9H2Q1 129 aa12.43□□□□□ -0.42
SHROOM1-201ENST00000319854 SCRT2Q9NQ03 307 aa12.43□□□□□ -0.42
SHROOM1-201ENST00000319854 HILPDAQ9Y5L2 63 aa12.43□□□□□ -0.42
SHROOM1-201ENST00000319854 INSIG2Q9Y5U4 225 aa12.43□□□□□ -0.42
SHROOM1-201ENST00000319854 A0A1W2PPI3 338 aa12.42□□□□□ -0.42
SHROOM1-201ENST00000319854 B9A039 149 aa12.42□□□□□ -0.42
SHROOM1-201ENST00000319854 ARF6P62330 175 aa12.42□□□□□ -0.42
SHROOM1-201ENST00000319854 LY6DQ14210 128 aa12.42□□□□□ -0.42
SHROOM1-201ENST00000319854 PLGLAQ15195 96 aa12.42□□□□□ -0.42
SHROOM1-201ENST00000319854 SSX8Q7RTT4 187 aa12.42□□□□□ -0.42
SHROOM1-201ENST00000319854 S100A7AQ86SG5 101 aa12.42□□□□□ -0.42
SHROOM1-201ENST00000319854 TMEM186Q96B77 213 aa12.42□□□□□ -0.42
SHROOM1-201ENST00000319854 TOX4O94842 621 aa12.42□□□□□ -0.42
SHROOM1-201ENST00000319854 FAM71F2Q6NXP2 309 aa12.42□□□□□ -0.42
SHROOM1-201ENST00000319854 GRAMD2BQ96HH9 432 aa12.42□□□□□ -0.42
SHROOM1-201ENST00000319854 FLNCQ14315 2725 aa12.42□□□□□ -0.42
SHROOM1-201ENST00000319854 ZFHX3Q15911 3703 aa12.42□□□□□ -0.42
SHROOM1-201ENST00000319854 A0A1W2PRE2 83 aa12.42□□□□□ -0.42
SHROOM1-201ENST00000319854 TMEM177Q53S58 311 aa12.42□□□□□ -0.42
SHROOM1-201ENST00000319854 C2orf83Q53S99 150 aa12.42□□□□□ -0.42
SHROOM1-201ENST00000319854 SLC25A33Q9BSK2 321 aa12.42□□□□□ -0.42
SHROOM1-201ENST00000319854 PPIAL4CA0A0B4J2A2 164 aa12.41□□□□□ -0.42
SHROOM1-201ENST00000319854 K7ERU9 68 aa12.41□□□□□ -0.42
SHROOM1-201ENST00000319854 CD5LO43866 347 aa12.41□□□□□ -0.42
SHROOM1-201ENST00000319854 IGLC1P0CG04 106 aa12.41□□□□□ -0.42
SHROOM1-201ENST00000319854 PPIAL4GP0DN37 164 aa12.41□□□□□ -0.42
SHROOM1-201ENST00000319854 UBE2L3P68036 154 aaKnown RBP12.41□□□□□ -0.42
SHROOM1-201ENST00000319854 VMA21Q3ZAQ7 101 aa12.41□□□□□ -0.42
SHROOM1-201ENST00000319854 RASL11AQ6T310 242 aa12.41□□□□□ -0.42
SHROOM1-201ENST00000319854 FAM167A-AS1Q96KT0 104 aa12.41□□□□□ -0.42
SHROOM1-201ENST00000319854 FBXL15Q9H469 300 aa12.41□□□□□ -0.42
SHROOM1-201ENST00000319854 DLL1O00548 723 aa12.41□□□□□ -0.42
SHROOM1-201ENST00000319854 COX7A2P2O60397 106 aa12.41□□□□□ -0.42
SHROOM1-201ENST00000319854 IGLV2-23P01705 113 aa12.41□□□□□ -0.42
SHROOM1-201ENST00000319854 ZNF672Q499Z4 452 aaPredicted RBP12.41□□□□□ -0.42
SHROOM1-201ENST00000319854 C12orf54Q6X4T0 127 aa12.41□□□□□ -0.42
SHROOM1-201ENST00000319854 BLNKQ8WV28 456 aa12.41□□□□□ -0.42
SHROOM1-201ENST00000319854 MYO18BQ8IUG5 2567 aa12.41□□□□□ -0.42
SHROOM1-201ENST00000319854 LEPROTL1O95214 131 aa12.4□□□□□ -0.42
SHROOM1-201ENST00000319854 DLX6P56179 175 aa12.4□□□□□ -0.42
SHROOM1-201ENST00000319854 PDPNQ86YL7 162 aa12.4□□□□□ -0.42
SHROOM1-201ENST00000319854 CLUHP3Q96NS8 147 aa12.4□□□□□ -0.42
SHROOM1-201ENST00000319854 SLC25A2Q9BXI2 301 aa12.4□□□□□ -0.42
SHROOM1-201ENST00000319854 AMMECR1Q9Y4X0 333 aaPredicted RBP12.4□□□□□ -0.42
SHROOM1-201ENST00000319854 TIMM8BQ9Y5J9 83 aaPredicted RBP12.4□□□□□ -0.42
SHROOM1-201ENST00000319854 S4R3C0 116 aa12.4□□□□□ -0.42
SHROOM1-201ENST00000319854 UTP20O75691 2785 aaKnown RBP12.4□□□□□ -0.42
SHROOM1-201ENST00000319854 CFAP46Q8IYW2 2715 aa12.4□□□□□ -0.42
SHROOM1-201ENST00000319854 A0A1B0GXF2 115 aa12.4□□□□□ -0.42
SHROOM1-201ENST00000319854 TNFRSF13BO14836 293 aaPredicted RBP12.4□□□□□ -0.42
SHROOM1-201ENST00000319854 GNG5P63218 68 aa12.4□□□□□ -0.42
SHROOM1-201ENST00000319854 NAA38Q9BRA0 125 aaKnown RBP12.4□□□□□ -0.42
SHROOM1-201ENST00000319854 MSRB2Q9Y3D2 182 aa12.4□□□□□ -0.42
SHROOM1-201ENST00000319854 C8orf88P0DMB2 117 aa12.4□□□□□ -0.42
SHROOM1-201ENST00000319854 KLRD1Q13241 179 aa12.4□□□□□ -0.42
SHROOM1-201ENST00000319854 LINC00322Q6ZN03 302 aaPredicted RBP12.4□□□□□ -0.42
SHROOM1-201ENST00000319854 OR1B1Q8NGR6 318 aa12.4□□□□□ -0.42
SHROOM1-201ENST00000319854 TMEM167AQ8TBQ9 72 aa12.4□□□□□ -0.42
SHROOM1-201ENST00000319854 RPEQ96AT9 228 aa12.4□□□□□ -0.42
SHROOM1-201ENST00000319854 FAM231BA6NCW3 169 aa12.39□□□□□ -0.43
SHROOM1-201ENST00000319854 VSTM2AQ8TAG5 236 aa12.39□□□□□ -0.43
SHROOM1-201ENST00000319854 SSUH2Q9Y2M2 353 aa12.39□□□□□ -0.43
SHROOM1-201ENST00000319854 ACACBO00763 2458 aa12.39□□□□□ -0.43
SHROOM1-201ENST00000319854 C2orf91Q6ZV80 131 aa12.39□□□□□ -0.43
SHROOM1-201ENST00000319854 FAM231DQ6ZW35 169 aa12.39□□□□□ -0.43
SHROOM1-201ENST00000319854 C7orf69Q9H7B7 122 aa12.39□□□□□ -0.43
SHROOM1-201ENST00000319854 C7orf71A4D174 169 aa12.38□□□□□ -0.43
SHROOM1-201ENST00000319854 ZNF137PP52743 207 aa12.38□□□□□ -0.43
SHROOM1-201ENST00000319854 UQCRFS1P47985 274 aa12.38□□□□□ -0.43
SHROOM1-201ENST00000319854 FER1L6-AS1Q8NA97 138 aa12.38□□□□□ -0.43
SHROOM1-201ENST00000319854 C1RLQ9NZP8 487 aa12.38□□□□□ -0.43
SHROOM1-201ENST00000319854 NDUFS7O75251 213 aa12.38□□□□□ -0.43
SHROOM1-201ENST00000319854 TMEM30BQ3MIR4 351 aa12.38□□□□□ -0.43
SHROOM1-201ENST00000319854 GPR183P32249 361 aa12.37□□□□□ -0.43
SHROOM1-201ENST00000319854 TAS2R45P59539 299 aa12.37□□□□□ -0.43
SHROOM1-201ENST00000319854 ADORA2A-AS1P86434 159 aa12.37□□□□□ -0.43
SHROOM1-201ENST00000319854 C10orf113Q5VZT2 155 aa12.37□□□□□ -0.43
SHROOM1-201ENST00000319854 ZNF329Q86UD4 541 aa12.37□□□□□ -0.43
SHROOM1-201ENST00000319854 CHRDL1Q9BU40 450 aa12.37□□□□□ -0.43
SHROOM1-201ENST00000319854 PEF1Q9UBV8 284 aaKnown RBP12.37□□□□□ -0.43
SHROOM1-201ENST00000319854 IGHV1-3A0A0C4DH29 117 aa12.37□□□□□ -0.43
SHROOM1-201ENST00000319854 C22orf46C9J442 243 aa12.37□□□□□ -0.43
SHROOM1-201ENST00000319854 PEX7O00628 323 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms