RNA–Protein interactions for RNA: ENST00000581335.1

NUP85-217, Transcript of nucleoporin 85, humanhuman

TSL 3

Gene NUP85, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-217ENST00000581335 PUS3Q9BZE2 481 aaKnown RBP11.05□□□□□ -0.64
NUP85-217ENST00000581335 FZD1Q9UP38 647 aa11.05□□□□□ -0.64
NUP85-217ENST00000581335 JAG2Q9Y219 1238 aa11.05□□□□□ -0.64
NUP85-217ENST00000581335 RIPOR2Q9Y4F9 1068 aa11.05□□□□□ -0.64
NUP85-217ENST00000581335 LAMB1P07942 1786 aa11.05□□□□□ -0.64
NUP85-217ENST00000581335 ZNF521Q96K83 1311 aa11.05□□□□□ -0.64
NUP85-217ENST00000581335 UNCXA6NJT0 531 aa11.04□□□□□ -0.64
NUP85-217ENST00000581335 GYG1P46976 350 aa11.04□□□□□ -0.64
NUP85-217ENST00000581335 INHBEP58166 350 aa11.04□□□□□ -0.64
NUP85-217ENST00000581335 MRPL50Q8N5N7 158 aaKnown RBP11.04□□□□□ -0.64
NUP85-217ENST00000581335 FAM84BQ96KN1 310 aaPredicted RBP11.04□□□□□ -0.64
NUP85-217ENST00000581335 VEZTQ9HBM0 779 aa11.04□□□□□ -0.64
NUP85-217ENST00000581335 MROH5Q6ZUA9 1318 aa11.04□□□□□ -0.64
NUP85-217ENST00000581335 TNRC18O15417 2968 aaPredicted RBP11.04□□□□□ -0.64
NUP85-217ENST00000581335 ARAP2Q8WZ64 1704 aa11.04□□□□□ -0.64
NUP85-217ENST00000581335 SSC5DA1L4H1 1573 aa11.03□□□□□ -0.64
NUP85-217ENST00000581335 MANSC4A6NHS7 340 aaPredicted RBP11.03□□□□□ -0.64
NUP85-217ENST00000581335 ALDH1A1P00352 501 aa11.03□□□□□ -0.64
NUP85-217ENST00000581335 RABL6Q3YEC7 729 aaPredicted RBP11.03□□□□□ -0.64
NUP85-217ENST00000581335 MFSD14BQ5SR56 506 aa11.03□□□□□ -0.64
NUP85-217ENST00000581335 NBPF12Q5TAG4 269 aaPredicted RBP11.03□□□□□ -0.64
NUP85-217ENST00000581335 PARP9Q8IXQ6 854 aa11.03□□□□□ -0.64
NUP85-217ENST00000581335 WNK4Q96J92 1243 aa11.03□□□□□ -0.64
NUP85-217ENST00000581335 BICC1Q9H694 974 aaKnown RBP11.03□□□□□ -0.64
NUP85-217ENST00000581335 TTF2Q9UNY4 1162 aaKnown RBP11.03□□□□□ -0.64
NUP85-217ENST00000581335 HPS5Q9UPZ3 1129 aa11.03□□□□□ -0.64
NUP85-217ENST00000581335 AOX1Q06278 1338 aa11.03□□□□□ -0.64
NUP85-217ENST00000581335 FKTNO75072 461 aa11.02□□□□□ -0.65
NUP85-217ENST00000581335 USP2O75604 605 aaPredicted RBP11.02□□□□□ -0.65
NUP85-217ENST00000581335 ZBTB48P10074 688 aaPredicted RBP11.02□□□□□ -0.65
NUP85-217ENST00000581335 IREB2P48200 963 aaKnown RBP11.02□□□□□ -0.65
NUP85-217ENST00000581335 SOX10P56693 466 aa11.02□□□□□ -0.65
NUP85-217ENST00000581335 HIC1Q14526 733 aa11.02□□□□□ -0.65
NUP85-217ENST00000581335 RASA3Q14644 834 aa11.02□□□□□ -0.65
NUP85-217ENST00000581335 LRRC24Q50LG9 513 aa11.02□□□□□ -0.65
NUP85-217ENST00000581335 FBXO33Q7Z6M2 555 aa11.02□□□□□ -0.65
NUP85-217ENST00000581335 CLMNQ96JQ2 1002 aa11.02□□□□□ -0.65
NUP85-217ENST00000581335 R3HDMLQ9H3Y0 253 aa11.02□□□□□ -0.65
NUP85-217ENST00000581335 ZNF70Q9UC06 446 aaPredicted RBP11.02□□□□□ -0.65
NUP85-217ENST00000581335 SERPINA10Q9UK55 444 aa11.02□□□□□ -0.65
NUP85-217ENST00000581335 PTPRCP08575 1304 aa11.02□□□□□ -0.65
NUP85-217ENST00000581335 E9PSI1 815 aa11.01□□□□□ -0.65
NUP85-217ENST00000581335 TNFAIP1Q13829 316 aa11.01□□□□□ -0.65
NUP85-217ENST00000581335 CAVIN4Q5BKX8 364 aa11.01□□□□□ -0.65
NUP85-217ENST00000581335 VPS37DQ86XT2 251 aa11.01□□□□□ -0.65
NUP85-217ENST00000581335 DZIP1LQ8IYY4 767 aaKnown RBP11.01□□□□□ -0.65
NUP85-217ENST00000581335 ANKRD13AQ8IZ07 590 aa11.01□□□□□ -0.65
NUP85-217ENST00000581335 ANKRD44Q8N8A2 993 aa11.01□□□□□ -0.65
NUP85-217ENST00000581335 TDRD3Q9H7E2 651 aaKnown RBP11.01□□□□□ -0.65
NUP85-217ENST00000581335 HAX1O00165 279 aa11□□□□□ -0.65
NUP85-217ENST00000581335 PDE8BO95263 885 aa11□□□□□ -0.65
NUP85-217ENST00000581335 PLCG2P16885 1265 aa11□□□□□ -0.65
NUP85-217ENST00000581335 CRKP46108 304 aa11□□□□□ -0.65
NUP85-217ENST00000581335 METTL24Q5JXM2 366 aa11□□□□□ -0.65
NUP85-217ENST00000581335 FBXO46Q6PJ61 603 aaPredicted RBP11□□□□□ -0.65
NUP85-217ENST00000581335 SSH1Q8WYL5 1049 aa11□□□□□ -0.65
NUP85-217ENST00000581335 DDX12PQ92771 950 aa11□□□□□ -0.65
NUP85-217ENST00000581335 ZMYND15Q9H091 742 aa11□□□□□ -0.65
NUP85-217ENST00000581335 USP44Q9H0E7 712 aa11□□□□□ -0.65
NUP85-217ENST00000581335 OTOFQ9HC10 1997 aa10.99□□□□□ -0.65
NUP85-217ENST00000581335 IGF2BP3O00425 579 aaKnown RBP eCLIP10.99□□□□□ -0.65
NUP85-217ENST00000581335 FRAT2O75474 233 aaPredicted RBP10.99□□□□□ -0.65
NUP85-217ENST00000581335 GJA5P36382 358 aa10.99□□□□□ -0.65
NUP85-217ENST00000581335 TNNI2P48788 182 aa10.99□□□□□ -0.65
NUP85-217ENST00000581335 HDLBPQ00341 1268 aaKnown RBP10.99□□□□□ -0.65
NUP85-217ENST00000581335 SLFN5Q08AF3 891 aa10.99□□□□□ -0.65
NUP85-217ENST00000581335 PTGDRQ13258 359 aa10.99□□□□□ -0.65
NUP85-217ENST00000581335 OTUD7BQ6GQQ9 843 aa10.99□□□□□ -0.65
NUP85-217ENST00000581335 VGLL2Q8N8G2 317 aa10.99□□□□□ -0.65
NUP85-217ENST00000581335 KLHDC4Q8TBB5 520 aa10.99□□□□□ -0.65
NUP85-217ENST00000581335 TBC1D22AQ8WUA7 517 aa10.99□□□□□ -0.65
NUP85-217ENST00000581335 TEPSINQ96N21 525 aa10.99□□□□□ -0.65
NUP85-217ENST00000581335 IQSEC3Q9UPP2 1182 aaPredicted RBP10.99□□□□□ -0.65
NUP85-217ENST00000581335 COLQQ9Y215 455 aaPredicted RBP10.99□□□□□ -0.65
NUP85-217ENST00000581335 TCP10L2B9ZVM9 353 aa10.98□□□□□ -0.65
NUP85-217ENST00000581335 BCAMP50895 628 aa10.98□□□□□ -0.65
NUP85-217ENST00000581335 CHAF1AQ13111 956 aaPredicted RBP10.98□□□□□ -0.65
NUP85-217ENST00000581335 GRIK5Q16478 980 aa10.98□□□□□ -0.65
NUP85-217ENST00000581335 ALDH1L2Q3SY69 923 aa10.98□□□□□ -0.65
NUP85-217ENST00000581335 MRIQ9BWK5 157 aa10.98□□□□□ -0.65
NUP85-217ENST00000581335 MYH13Q9UKX3 1938 aa10.97□□□□□ -0.65
NUP85-217ENST00000581335 EVI5O60447 810 aa10.97□□□□□ -0.65
NUP85-217ENST00000581335 SLC34A2O95436 690 aa10.97□□□□□ -0.65
NUP85-217ENST00000581335 IFIT1P09914 478 aaKnown RBP10.97□□□□□ -0.65
NUP85-217ENST00000581335 FGFR2P21802 821 aa10.97□□□□□ -0.65
NUP85-217ENST00000581335 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.97□□□□□ -0.65
NUP85-217ENST00000581335 CDAN1Q8IWY9 1227 aa10.97□□□□□ -0.65
NUP85-217ENST00000581335 PTCD2Q8WV60 388 aaKnown RBP10.97□□□□□ -0.65
NUP85-217ENST00000581335 TEKT1Q969V4 418 aa10.97□□□□□ -0.65
NUP85-217ENST00000581335 OPTNQ96CV9 577 aa10.97□□□□□ -0.65
NUP85-217ENST00000581335 DDRGK1Q96HY6 314 aa10.97□□□□□ -0.65
NUP85-217ENST00000581335 PTPN18Q99952 460 aa10.97□□□□□ -0.65
NUP85-217ENST00000581335 TMEM39BQ9GZU3 492 aa10.97□□□□□ -0.65
NUP85-217ENST00000581335 ELP3Q9H9T3 547 aa10.97□□□□□ -0.65
NUP85-217ENST00000581335 SUGT1Q9Y2Z0 365 aa10.97□□□□□ -0.65
NUP85-217ENST00000581335 KIF16BQ96L93 1317 aa10.97□□□□□ -0.65
NUP85-217ENST00000581335 POTEFA5A3E0 1075 aa10.96□□□□□ -0.65
NUP85-217ENST00000581335 EYA2O00167 538 aa10.96□□□□□ -0.65
NUP85-217ENST00000581335 RFX5P48382 616 aaPredicted RBP10.96□□□□□ -0.65
NUP85-217ENST00000581335 PUM3Q15397 648 aaKnown RBP10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms