RNA–Protein interactions for RNA: ENST00000574788.5

USP6-205, Transcript of ubiquitin specific peptidase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP6, Length 8,464 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6-205ENST00000574788 ISM2Q6H9L7 571 aa11.18□□□□□ -0.62
USP6-205ENST00000574788 NUCKS1Q9H1E3 243 aaKnown RBP11.18□□□□□ -0.62
USP6-205ENST00000574788 A0A1B0GUL7 405 aa11.18□□□□□ -0.62
USP6-205ENST00000574788 ERCC3P19447 782 aa11.18□□□□□ -0.62
USP6-205ENST00000574788 ZSCAN23Q3MJ62 389 aa11.18□□□□□ -0.62
USP6-205ENST00000574788 SV2BQ7L1I2 683 aa11.18□□□□□ -0.62
USP6-205ENST00000574788 WHAMMQ8TF30 809 aa11.18□□□□□ -0.62
USP6-205ENST00000574788 CCDC124Q96CT7 223 aaKnown RBP11.18□□□□□ -0.62
USP6-205ENST00000574788 THEGQ9P2T0 379 aa11.18□□□□□ -0.62
USP6-205ENST00000574788 CYP7A1P22680 504 aa11.18□□□□□ -0.62
USP6-205ENST00000574788 PDCD2Q16342 344 aaPredicted RBP11.18□□□□□ -0.62
USP6-205ENST00000574788 MIS12Q9H081 205 aa11.18□□□□□ -0.62
USP6-205ENST00000574788 RARSP54136 660 aaKnown RBP11.17□□□□□ -0.62
USP6-205ENST00000574788 WHAMMP3Q1A5X7 153 aa11.17□□□□□ -0.62
USP6-205ENST00000574788 EIF2AQ9BY44 585 aaKnown RBP11.17□□□□□ -0.62
USP6-205ENST00000574788 CCDC122Q5T0U0 273 aa11.17□□□□□ -0.62
USP6-205ENST00000574788 AFAP1L1Q8TED9 768 aa11.17□□□□□ -0.62
USP6-205ENST00000574788 EYA3Q99504 573 aa11.17□□□□□ -0.62
USP6-205ENST00000574788 PPP1R12CQ9BZL4 782 aa11.17□□□□□ -0.62
USP6-205ENST00000574788 HSPA8P11142 646 aaKnown RBP11.17□□□□□ -0.62
USP6-205ENST00000574788 TBC1D9Q6ZT07 1266 aa11.17□□□□□ -0.62
USP6-205ENST00000574788 MYH10P35580 1976 aa11.17□□□□□ -0.62
USP6-205ENST00000574788 IL16Q14005 1332 aa11.17□□□□□ -0.62
USP6-205ENST00000574788 UTP14CQ5TAP6 766 aaKnown RBP11.17□□□□□ -0.62
USP6-205ENST00000574788 ANKRD20A3Q5VUR7 823 aa11.17□□□□□ -0.62
USP6-205ENST00000574788 PPP1R21Q6ZMI0 780 aa11.17□□□□□ -0.62
USP6-205ENST00000574788 AFAP1Q8N556 730 aa11.17□□□□□ -0.62
USP6-205ENST00000574788 ZC3H12CQ9C0D7 883 aaKnown RBP11.17□□□□□ -0.62
USP6-205ENST00000574788 PICK1Q9NRD5 415 aa11.17□□□□□ -0.62
USP6-205ENST00000574788 SLC4A4Q9Y6R1 1079 aa11.17□□□□□ -0.62
USP6-205ENST00000574788 DCAF17Q5H9S7 520 aaPredicted RBP11.17□□□□□ -0.62
USP6-205ENST00000574788 DDX27Q96GQ7 796 aaKnown RBP11.17□□□□□ -0.62
USP6-205ENST00000574788 TRIML1Q8N9V2 468 aa11.17□□□□□ -0.62
USP6-205ENST00000574788 NAIPQ13075 1403 aa11.17□□□□□ -0.62
USP6-205ENST00000574788 SMIM23A6NLE4 172 aa11.17□□□□□ -0.62
USP6-205ENST00000574788 AKR1B15C9JRZ8 316 aaPredicted RBP11.17□□□□□ -0.62
USP6-205ENST00000574788 M0QZ92 97 aa11.17□□□□□ -0.62
USP6-205ENST00000574788 FLOT1O75955 427 aa11.17□□□□□ -0.62
USP6-205ENST00000574788 ZNF131P52739 623 aa11.17□□□□□ -0.62
USP6-205ENST00000574788 ATP2B3Q16720 1220 aa11.17□□□□□ -0.62
USP6-205ENST00000574788 CLEC11AQ9Y240 323 aa11.17□□□□□ -0.62
USP6-205ENST00000574788 NCAPD3P42695 1498 aa11.17□□□□□ -0.62
USP6-205ENST00000574788 NDUFAB1O14561 156 aa11.16□□□□□ -0.62
USP6-205ENST00000574788 IL15P40933 162 aaPredicted RBP11.16□□□□□ -0.62
USP6-205ENST00000574788 HAND2P61296 217 aa11.16□□□□□ -0.62
USP6-205ENST00000574788 DBN1Q16643 649 aa11.16□□□□□ -0.62
USP6-205ENST00000574788 PHLDB3Q6NSJ2 640 aa11.16□□□□□ -0.62
USP6-205ENST00000574788 C8orf74Q6P047 294 aa11.16□□□□□ -0.62
USP6-205ENST00000574788 NPHP3Q7Z494 1330 aa11.16□□□□□ -0.62
USP6-205ENST00000574788 PHBP35232 272 aa11.16□□□□□ -0.62
USP6-205ENST00000574788 BIN2Q9UBW5 565 aaPredicted RBP11.16□□□□□ -0.62
USP6-205ENST00000574788 IPO11Q9UI26 975 aaKnown RBP11.16□□□□□ -0.62
USP6-205ENST00000574788 TTF2Q9UNY4 1162 aaKnown RBP11.16□□□□□ -0.62
USP6-205ENST00000574788 RALGAPBQ86X10 1494 aa11.16□□□□□ -0.62
USP6-205ENST00000574788 RAB17Q9H0T7 212 aa11.16□□□□□ -0.62
USP6-205ENST00000574788 ARHGEF10LQ9HCE6 1279 aa11.16□□□□□ -0.62
USP6-205ENST00000574788 RBBP5Q15291 538 aaKnown RBP11.16□□□□□ -0.62
USP6-205ENST00000574788 MIER3Q7Z3K6 550 aa11.16□□□□□ -0.62
USP6-205ENST00000574788 ZC3H15Q8WU90 426 aaKnown RBP11.16□□□□□ -0.62
USP6-205ENST00000574788 CAPZA3Q96KX2 299 aa11.16□□□□□ -0.62
USP6-205ENST00000574788 ANKRD2Q9GZV1 360 aa11.16□□□□□ -0.62
USP6-205ENST00000574788 MAGEB6P1A0A0J9YX57 407 aa11.16□□□□□ -0.62
USP6-205ENST00000574788 NOP56O00567 594 aaKnown RBP11.16□□□□□ -0.62
USP6-205ENST00000574788 GPTP24298 496 aa11.16□□□□□ -0.62
USP6-205ENST00000574788 PSMD6Q15008 389 aa11.16□□□□□ -0.62
USP6-205ENST00000574788 DENND2CQ68D51 928 aa11.16□□□□□ -0.62
USP6-205ENST00000574788 ANKRD13DQ6ZTN6 518 aa11.16□□□□□ -0.62
USP6-205ENST00000574788 ELP1O95163 1332 aa11.16□□□□□ -0.62
USP6-205ENST00000574788 MCM7P33993 719 aa11.16□□□□□ -0.62
USP6-205ENST00000574788 SSFA2P28290 1259 aa11.16□□□□□ -0.62
USP6-205ENST00000574788 POLD1P28340 1107 aa11.16□□□□□ -0.62
USP6-205ENST00000574788 ZNF569Q5MCW4 686 aa11.16□□□□□ -0.62
USP6-205ENST00000574788 CYP26C1Q6V0L0 522 aa11.16□□□□□ -0.62
USP6-205ENST00000574788 DRC3Q9H069 523 aa11.16□□□□□ -0.62
USP6-205ENST00000574788 HHATQ5VTY9 493 aa11.15□□□□□ -0.62
USP6-205ENST00000574788 DCUN1D2Q6PH85 259 aa11.15□□□□□ -0.62
USP6-205ENST00000574788 IWS1Q96ST2 819 aa11.15□□□□□ -0.62
USP6-205ENST00000574788 BEGAINQ9BUH8 593 aa11.15□□□□□ -0.62
USP6-205ENST00000574788 DNM2P50570 870 aa11.15□□□□□ -0.62
USP6-205ENST00000574788 VSIG1Q86XK7 387 aa11.15□□□□□ -0.62
USP6-205ENST00000574788 AOPEPQ8N6M6 819 aa11.15□□□□□ -0.62
USP6-205ENST00000574788 TTC22Q5TAA0 569 aa11.15□□□□□ -0.62
USP6-205ENST00000574788 SMARCA5O60264 1052 aaPredicted RBP11.15□□□□□ -0.62
USP6-205ENST00000574788 CASC4Q6P4E1 433 aa11.15□□□□□ -0.62
USP6-205ENST00000574788 TRIM35Q9UPQ4 493 aa11.15□□□□□ -0.62
USP6-205ENST00000574788 CFTRP13569 1480 aa11.15□□□□□ -0.62
USP6-205ENST00000574788 NR1I2O75469 434 aa11.15□□□□□ -0.62
USP6-205ENST00000574788 RAPGEF1Q13905 1077 aa11.15□□□□□ -0.62
USP6-205ENST00000574788 SLC9C1Q4G0N8 1177 aa11.15□□□□□ -0.62
USP6-205ENST00000574788 RPGRIP1Q96KN7 1286 aa11.15□□□□□ -0.62
USP6-205ENST00000574788 ITSN2Q9NZM3 1697 aa11.15□□□□□ -0.62
USP6-205ENST00000574788 PDZD4Q76G19 769 aaPredicted RBP11.15□□□□□ -0.63
USP6-205ENST00000574788 CADPS2Q86UW7 1296 aa11.15□□□□□ -0.63
USP6-205ENST00000574788 DACT3Q96B18 629 aaPredicted RBP11.15□□□□□ -0.63
USP6-205ENST00000574788 BAG1Q99933 345 aaPredicted RBP11.15□□□□□ -0.63
USP6-205ENST00000574788 ORC6Q9Y5N6 252 aa11.15□□□□□ -0.63
USP6-205ENST00000574788 ZNF644Q9H582 1327 aaPredicted RBP11.15□□□□□ -0.63
USP6-205ENST00000574788 GIMAP6Q6P9H5 292 aa11.14□□□□□ -0.63
USP6-205ENST00000574788 CCDC84Q86UT8 332 aaPredicted RBP11.14□□□□□ -0.63
USP6-205ENST00000574788 IVNS1ABPQ9Y6Y0 642 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms