RNA–Protein interactions for RNA: ENST00000502588.5

TNFRSF25-216, Transcript of TNF receptor superfamily member 25, humanhuman

TSL 1 (best)

Gene TNFRSF25, Length 952 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF25-216ENST00000502588 POLA2Q14181 598 aa28.13■■■□□ 2.09
TNFRSF25-216ENST00000502588 FKBP1CQ5VVH2 108 aa28.13■■■□□ 2.09
TNFRSF25-216ENST00000502588 PI16Q6UXB8 463 aa28.13■■■□□ 2.09
TNFRSF25-216ENST00000502588 IFNL1Q8IU54 200 aa28.13■■■□□ 2.09
TNFRSF25-216ENST00000502588 OPTNQ96CV9 577 aa28.13■■■□□ 2.09
TNFRSF25-216ENST00000502588 ZBTB22O15209 634 aa28.12■■■□□ 2.09
TNFRSF25-216ENST00000502588 RPAP1Q9BWH6 1393 aaPredicted RBP28.11■■■□□ 2.09
TNFRSF25-216ENST00000502588 GPR25O00155 361 aa28.11■■■□□ 2.09
TNFRSF25-216ENST00000502588 ZBTB7BO15156 539 aaPredicted RBP28.11■■■□□ 2.09
TNFRSF25-216ENST00000502588 TCP10Q12799 353 aa28.11■■■□□ 2.09
TNFRSF25-216ENST00000502588 G3BP1Q13283 466 aaKnown RBP eCLIP28.11■■■□□ 2.09
TNFRSF25-216ENST00000502588 MVPQ14764 893 aaKnown RBP28.11■■■□□ 2.09
TNFRSF25-216ENST00000502588 PANK1Q8TE04 598 aa28.11■■■□□ 2.09
TNFRSF25-216ENST00000502588 ABCF2Q9UG63 623 aa28.11■■■□□ 2.09
TNFRSF25-216ENST00000502588 MAP3K9P80192 1104 aa28.1■■■□□ 2.09
TNFRSF25-216ENST00000502588 SSH3Q8TE77 659 aa28.1■■■□□ 2.09
TNFRSF25-216ENST00000502588 PTPN18Q99952 460 aa28.1■■■□□ 2.09
TNFRSF25-216ENST00000502588 FAM198AQ9UFP1 575 aa28.1■■■□□ 2.09
TNFRSF25-216ENST00000502588 PDS5AQ29RF7 1337 aaKnown RBP28.1■■■□□ 2.09
TNFRSF25-216ENST00000502588 ATP8B2P98198 1209 aa28.09■■■□□ 2.09
TNFRSF25-216ENST00000502588 CTU1Q7Z7A3 348 aaKnown RBP28.09■■■□□ 2.09
TNFRSF25-216ENST00000502588 ZFPM1Q8IX07 1006 aa28.09■■■□□ 2.09
TNFRSF25-216ENST00000502588 ZNF384Q8TF68 577 aa28.09■■■□□ 2.09
TNFRSF25-216ENST00000502588 CFHR5Q9BXR6 569 aa28.09■■■□□ 2.09
TNFRSF25-216ENST00000502588 USP40Q9NVE5 1235 aa28.09■■■□□ 2.09
TNFRSF25-216ENST00000502588 HMG20BQ9P0W2 317 aa28.09■■■□□ 2.09
TNFRSF25-216ENST00000502588 SNCAIPQ9Y6H5 919 aa28.09■■■□□ 2.09
TNFRSF25-216ENST00000502588 MIGA2Q7L4E1 593 aa28.08■■■□□ 2.09
TNFRSF25-216ENST00000502588 FAM151AQ8WW52 585 aa28.08■■■□□ 2.09
TNFRSF25-216ENST00000502588 ZKSCAN4Q969J2 545 aaPredicted RBP28.08■■■□□ 2.09
TNFRSF25-216ENST00000502588 WRNIP1Q96S55 665 aa28.08■■■□□ 2.09
TNFRSF25-216ENST00000502588 GAKO14976 1311 aa28.08■■■□□ 2.09
TNFRSF25-216ENST00000502588 RFX7Q2KHR2 1363 aa28.08■■■□□ 2.09
TNFRSF25-216ENST00000502588 DZIP1Q86YF9 867 aaKnown RBP28.07■■■□□ 2.08
TNFRSF25-216ENST00000502588 OTUD5Q96G74 571 aa28.07■■■□□ 2.08
TNFRSF25-216ENST00000502588 MS4A4AQ96JQ5 239 aa28.07■■■□□ 2.08
TNFRSF25-216ENST00000502588 MAST2Q6P0Q8 1798 aa28.06■■■□□ 2.08
TNFRSF25-216ENST00000502588 INHBEP58166 350 aa28.06■■■□□ 2.08
TNFRSF25-216ENST00000502588 TBC1D9Q6ZT07 1266 aa28.06■■■□□ 2.08
TNFRSF25-216ENST00000502588 ZGPATQ8N5A5 531 aaKnown RBP28.06■■■□□ 2.08
TNFRSF25-216ENST00000502588 CSADQ9Y600 493 aa28.06■■■□□ 2.08
TNFRSF25-216ENST00000502588 TESPA1A2RU30 521 aaPredicted RBP28.05■■■□□ 2.08
TNFRSF25-216ENST00000502588 ARID4AP29374 1257 aaPredicted RBP28.05■■■□□ 2.08
TNFRSF25-216ENST00000502588 MCAMP43121 646 aa28.05■■■□□ 2.08
TNFRSF25-216ENST00000502588 GORABQ5T7V8 394 aa28.05■■■□□ 2.08
TNFRSF25-216ENST00000502588 SURF6O75683 361 aaKnown RBP28.04■■■□□ 2.08
TNFRSF25-216ENST00000502588 ALDH1A1P00352 501 aa28.04■■■□□ 2.08
TNFRSF25-216ENST00000502588 INPP5BP32019 993 aa28.04■■■□□ 2.08
TNFRSF25-216ENST00000502588 MECOMQ03112 1051 aa28.04■■■□□ 2.08
TNFRSF25-216ENST00000502588 NOM1Q5C9Z4 860 aaKnown RBP28.04■■■□□ 2.08
TNFRSF25-216ENST00000502588 SPATA5Q8NB90 893 aa28.04■■■□□ 2.08
TNFRSF25-216ENST00000502588 BRI3BPQ8WY22 251 aa28.04■■■□□ 2.08
TNFRSF25-216ENST00000502588 DBNDD2Q9BQY9 259 aa28.04■■■□□ 2.08
TNFRSF25-216ENST00000502588 CDK5RAP2Q96SN8 1893 aa28.04■■■□□ 2.08
TNFRSF25-216ENST00000502588 SPDYE5A6NIY4 337 aa28.03■■■□□ 2.08
TNFRSF25-216ENST00000502588 CRHR2Q13324 411 aa28.03■■■□□ 2.08
TNFRSF25-216ENST00000502588 TNNI3KQ59H18 835 aa28.03■■■□□ 2.08
TNFRSF25-216ENST00000502588 FPGT-TNNI3KV9GXZ4 949 aa28.03■■■□□ 2.08
TNFRSF25-216ENST00000502588 MROH7-TTC4A0A0A0MT08 1334 aa28.02■■■□□ 2.08
TNFRSF25-216ENST00000502588 FKTNO75072 461 aa28.02■■■□□ 2.08
TNFRSF25-216ENST00000502588 SLURP2P0DP57 97 aa28.02■■■□□ 2.08
TNFRSF25-216ENST00000502588 BTDP43251 543 aa28.02■■■□□ 2.08
TNFRSF25-216ENST00000502588 RGS3P49796 1198 aa28.02■■■□□ 2.08
TNFRSF25-216ENST00000502588 OS9Q13438 667 aaPredicted RBP28.02■■■□□ 2.08
TNFRSF25-216ENST00000502588 CEP85Q6P2H3 762 aa28.02■■■□□ 2.08
TNFRSF25-216ENST00000502588 ZNF341Q9BYN7 854 aa28.02■■■□□ 2.08
TNFRSF25-216ENST00000502588 DDX4Q9NQI0 724 aaKnown RBP28.02■■■□□ 2.08
TNFRSF25-216ENST00000502588 ZSWIM8A7E2V4 1837 aa28.02■■■□□ 2.08
TNFRSF25-216ENST00000502588 ATRNL1Q5VV63 1379 aa28.01■■■□□ 2.07
TNFRSF25-216ENST00000502588 DCAF15Q66K64 600 aa28.01■■■□□ 2.07
TNFRSF25-216ENST00000502588 ERICH6Q7L0X2 663 aa28.01■■■□□ 2.07
TNFRSF25-216ENST00000502588 SH3BP5LQ7L8J4 393 aa28.01■■■□□ 2.07
TNFRSF25-216ENST00000502588 SNRKQ9NRH2 765 aa28.01■■■□□ 2.07
TNFRSF25-216ENST00000502588 CCL15-CCL14A0A0B4J2E2 113 aa28■■■□□ 2.07
TNFRSF25-216ENST00000502588 WDHD1O75717 1129 aaPredicted RBP28■■■□□ 2.07
TNFRSF25-216ENST00000502588 CCL15Q16663 113 aa28■■■□□ 2.07
TNFRSF25-216ENST00000502588 SPTY2D1Q68D10 685 aaPredicted RBP28■■■□□ 2.07
TNFRSF25-216ENST00000502588 HOOK2Q96ED9 719 aa28■■■□□ 2.07
TNFRSF25-216ENST00000502588 FAM163AQ96GL9 167 aaPredicted RBP28■■■□□ 2.07
TNFRSF25-216ENST00000502588 GPR108Q9NPR9 543 aa28■■■□□ 2.07
TNFRSF25-216ENST00000502588 TLR7Q9NYK1 1049 aaKnown RBP28■■■□□ 2.07
TNFRSF25-216ENST00000502588 NOP58Q9Y2X3 529 aaKnown RBP28■■■□□ 2.07
TNFRSF25-216ENST00000502588 IDI2Q9BXS1 227 aa27.99■■■□□ 2.07
TNFRSF25-216ENST00000502588 DOCK1Q14185 1865 aa27.98■■■□□ 2.07
TNFRSF25-216ENST00000502588 PHIPQ8WWQ0 1821 aa27.98■■■□□ 2.07
TNFRSF25-216ENST00000502588 RHBDL3P58872 404 aa27.98■■■□□ 2.07
TNFRSF25-216ENST00000502588 CAP1Q01518 475 aa27.98■■■□□ 2.07
TNFRSF25-216ENST00000502588 ERO1BQ86YB8 467 aa27.98■■■□□ 2.07
TNFRSF25-216ENST00000502588 FAM43AQ8N2R8 423 aa27.98■■■□□ 2.07
TNFRSF25-216ENST00000502588 NSUN4Q96CB9 384 aaKnown RBP27.98■■■□□ 2.07
TNFRSF25-216ENST00000502588 ZNF112Q9UJU3 913 aa27.98■■■□□ 2.07
TNFRSF25-216ENST00000502588 HPS5Q9UPZ3 1129 aa27.98■■■□□ 2.07
TNFRSF25-216ENST00000502588 FOCADQ5VW36 1801 aa27.97■■■□□ 2.07
TNFRSF25-216ENST00000502588 IRF6O14896 467 aa27.97■■■□□ 2.07
TNFRSF25-216ENST00000502588 UQCRFS1P1P0C7P4 283 aa27.97■■■□□ 2.07
TNFRSF25-216ENST00000502588 GTF2A2P52657 109 aa27.97■■■□□ 2.07
TNFRSF25-216ENST00000502588 PICALMQ13492 652 aa27.97■■■□□ 2.07
TNFRSF25-216ENST00000502588 DBNLQ9UJU6 430 aaKnown RBP27.97■■■□□ 2.07
TNFRSF25-216ENST00000502588 GPR75-ASB3A0A0A6YYF3 556 aa27.96■■■□□ 2.07
TNFRSF25-216ENST00000502588 DDTLA6NHG4 134 aaPredicted RBP27.96■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms