RNA–Protein interactions for RNA: ENST00000477702.1

LINC00173-202, long intergenic non-protein coding RNA 173, humanhuman

TSL 3

Gene LINC00173, Length 314 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00173-202ENST00000477702 TTC5Q8N0Z6 440 aa8.32□□□□□ -1.08
LINC00173-202ENST00000477702 ZNF592Q92610 1267 aa8.32□□□□□ -1.08
LINC00173-202ENST00000477702 ZNF496Q96IT1 587 aaPredicted RBP8.32□□□□□ -1.08
LINC00173-202ENST00000477702 CSRNP1Q96S65 589 aa8.32□□□□□ -1.08
LINC00173-202ENST00000477702 HDAC9Q9UKV0 1011 aa8.32□□□□□ -1.08
LINC00173-202ENST00000477702 MKI67P46013 3256 aaKnown RBP8.32□□□□□ -1.08
LINC00173-202ENST00000477702 SNED1Q8TER0 1413 aa8.31□□□□□ -1.08
LINC00173-202ENST00000477702 USP17L5A8MUK1 530 aa8.31□□□□□ -1.08
LINC00173-202ENST00000477702 SCTRP47872 440 aa8.31□□□□□ -1.08
LINC00173-202ENST00000477702 CXCL9Q07325 125 aa8.31□□□□□ -1.08
LINC00173-202ENST00000477702 NNTQ13423 1086 aa8.31□□□□□ -1.08
LINC00173-202ENST00000477702 AOC3Q16853 763 aa8.31□□□□□ -1.08
LINC00173-202ENST00000477702 OXLD1Q5BKU9 147 aa8.31□□□□□ -1.08
LINC00173-202ENST00000477702 SLC17A8Q8NDX2 589 aa8.31□□□□□ -1.08
LINC00173-202ENST00000477702 GBA2Q9HCG7 927 aaPredicted RBP8.31□□□□□ -1.08
LINC00173-202ENST00000477702 PGAP2Q9UHJ9 254 aa8.31□□□□□ -1.08
LINC00173-202ENST00000477702 DOLKQ9UPQ8 538 aa8.31□□□□□ -1.08
LINC00173-202ENST00000477702 WASF2Q9Y6W5 498 aa8.31□□□□□ -1.08
LINC00173-202ENST00000477702 NPC1L1Q9UHC9 1359 aa8.31□□□□□ -1.08
LINC00173-202ENST00000477702 MRC1P22897 1456 aa8.31□□□□□ -1.08
LINC00173-202ENST00000477702 SZT2Q5T011 3432 aa8.3□□□□□ -1.08
LINC00173-202ENST00000477702 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.3□□□□□ -1.08
LINC00173-202ENST00000477702 USP17L3A6NCW0 530 aa8.3□□□□□ -1.08
LINC00173-202ENST00000477702 USP17L4A6NCW7 530 aa8.3□□□□□ -1.08
LINC00173-202ENST00000477702 PPIP5K2O43314 1243 aa8.3□□□□□ -1.08
LINC00173-202ENST00000477702 GTF2E1P29083 439 aaPredicted RBP8.3□□□□□ -1.08
LINC00173-202ENST00000477702 NCOA4Q13772 614 aa8.3□□□□□ -1.08
LINC00173-202ENST00000477702 PKN2Q16513 984 aaKnown RBP8.3□□□□□ -1.08
LINC00173-202ENST00000477702 PPP1R26Q5T8A7 1209 aaPredicted RBP8.3□□□□□ -1.08
LINC00173-202ENST00000477702 USP17L2Q6R6M4 530 aa8.3□□□□□ -1.08
LINC00173-202ENST00000477702 TPTE2Q6XPS3 522 aa8.3□□□□□ -1.08
LINC00173-202ENST00000477702 USP17L1Q7RTZ2 530 aa8.3□□□□□ -1.08
LINC00173-202ENST00000477702 CCDC116Q8IYX3 515 aa8.3□□□□□ -1.08
LINC00173-202ENST00000477702 ZNF296Q8WUU4 475 aaPredicted RBP8.3□□□□□ -1.08
LINC00173-202ENST00000477702 HPS1Q92902 700 aa8.3□□□□□ -1.08
LINC00173-202ENST00000477702 BCL2L13Q9BXK5 485 aa8.3□□□□□ -1.08
LINC00173-202ENST00000477702 NIP7Q9Y221 180 aaKnown RBP eCLIP8.3□□□□□ -1.08
LINC00173-202ENST00000477702 ADM5C9JUS6 153 aa8.29□□□□□ -1.08
LINC00173-202ENST00000477702 RAD17O75943 681 aa8.29□□□□□ -1.08
LINC00173-202ENST00000477702 TBC1D8O95759 1140 aa8.29□□□□□ -1.08
LINC00173-202ENST00000477702 NR5A1Q13285 461 aa8.29□□□□□ -1.08
LINC00173-202ENST00000477702 RNF20Q5VTR2 975 aa8.29□□□□□ -1.08
LINC00173-202ENST00000477702 KRT26Q7Z3Y9 468 aa8.29□□□□□ -1.08
LINC00173-202ENST00000477702 C2orf69Q8N8R5 385 aa8.29□□□□□ -1.08
LINC00173-202ENST00000477702 CYLDQ9NQC7 956 aa8.29□□□□□ -1.08
LINC00173-202ENST00000477702 ZNRF3Q9ULT6 936 aa8.29□□□□□ -1.08
LINC00173-202ENST00000477702 HEG1Q9ULI3 1381 aa8.29□□□□□ -1.08
LINC00173-202ENST00000477702 AKAP11Q9UKA4 1901 aa8.29□□□□□ -1.08
LINC00173-202ENST00000477702 UBR2Q8IWV8 1755 aa8.28□□□□□ -1.08
LINC00173-202ENST00000477702 HMOX1P09601 288 aa8.28□□□□□ -1.08
LINC00173-202ENST00000477702 MTHFSDQ2M296 383 aaKnown RBP8.28□□□□□ -1.08
LINC00173-202ENST00000477702 CC2D2BQ6DHV5 1058 aa8.28□□□□□ -1.08
LINC00173-202ENST00000477702 FBXO46Q6PJ61 603 aaPredicted RBP8.28□□□□□ -1.08
LINC00173-202ENST00000477702 RPGRQ92834 1020 aaKnown RBP8.28□□□□□ -1.08
LINC00173-202ENST00000477702 TEX13AQ9BXU3 409 aaPredicted RBP8.28□□□□□ -1.08
LINC00173-202ENST00000477702 CNOT7Q9UIV1 285 aaKnown RBP8.28□□□□□ -1.08
LINC00173-202ENST00000477702 ZNF652Q9Y2D9 606 aa8.28□□□□□ -1.08
LINC00173-202ENST00000477702 KIAA0100Q14667 2235 aaKnown RBP8.27□□□□□ -1.08
LINC00173-202ENST00000477702 ABCC12Q96J65 1359 aa8.27□□□□□ -1.09
LINC00173-202ENST00000477702 KCNQ3O43525 872 aa8.27□□□□□ -1.09
LINC00173-202ENST00000477702 IL13P35225 146 aa8.27□□□□□ -1.09
LINC00173-202ENST00000477702 CRY2Q49AN0 593 aa8.27□□□□□ -1.09
LINC00173-202ENST00000477702 ZNF790Q6PG37 636 aa8.27□□□□□ -1.09
LINC00173-202ENST00000477702 CLEC4GQ6UXB4 293 aa8.27□□□□□ -1.09
LINC00173-202ENST00000477702 POLR3GLQ9BT43 218 aa8.27□□□□□ -1.09
LINC00173-202ENST00000477702 KLF16Q9BXK1 252 aaPredicted RBP8.27□□□□□ -1.09
LINC00173-202ENST00000477702 ZFAND3Q9H8U3 227 aa8.27□□□□□ -1.09
LINC00173-202ENST00000477702 LILRA1O75019 489 aa8.26□□□□□ -1.09
LINC00173-202ENST00000477702 EGFRP00533 1210 aa8.26□□□□□ -1.09
LINC00173-202ENST00000477702 ADD1P35611 737 aaKnown RBP8.26□□□□□ -1.09
LINC00173-202ENST00000477702 CBLBQ13191 982 aa8.26□□□□□ -1.09
LINC00173-202ENST00000477702 HLFQ16534 295 aa8.26□□□□□ -1.09
LINC00173-202ENST00000477702 MAP7D1Q3KQU3 841 aa8.26□□□□□ -1.09
LINC00173-202ENST00000477702 TBC1D10BQ4KMP7 808 aaPredicted RBP8.26□□□□□ -1.09
LINC00173-202ENST00000477702 RASAL3Q86YV0 1011 aa8.26□□□□□ -1.09
LINC00173-202ENST00000477702 PLEKHM2Q8IWE5 1019 aa8.26□□□□□ -1.09
LINC00173-202ENST00000477702 ITPKCQ96DU7 683 aa8.26□□□□□ -1.09
LINC00173-202ENST00000477702 FMNL2Q96PY5 1086 aa8.26□□□□□ -1.09
LINC00173-202ENST00000477702 USP16Q9Y5T5 823 aa8.26□□□□□ -1.09
LINC00173-202ENST00000477702 HTTP42858 3142 aa8.26□□□□□ -1.09
LINC00173-202ENST00000477702 PRAMEF22A3QJZ6 481 aa8.25□□□□□ -1.09
LINC00173-202ENST00000477702 FAM187AA6NFU0 413 aa8.25□□□□□ -1.09
LINC00173-202ENST00000477702 H7C1D1 291 aa8.25□□□□□ -1.09
LINC00173-202ENST00000477702 GPR25O00155 361 aa8.25□□□□□ -1.09
LINC00173-202ENST00000477702 GFRA3O60609 400 aa8.25□□□□□ -1.09
LINC00173-202ENST00000477702 STAU1O95793 577 aaKnown RBP8.25□□□□□ -1.09
LINC00173-202ENST00000477702 HOXA10P31260 410 aaPredicted RBP8.25□□□□□ -1.09
LINC00173-202ENST00000477702 WDR4P57081 412 aaKnown RBP8.25□□□□□ -1.09
LINC00173-202ENST00000477702 TEFQ10587 303 aa8.25□□□□□ -1.09
LINC00173-202ENST00000477702 TNIP1Q15025 636 aa8.25□□□□□ -1.09
LINC00173-202ENST00000477702 ZIC2O95409 532 aaPredicted RBP8.24□□□□□ -1.09
LINC00173-202ENST00000477702 TIMP2P16035 220 aa8.24□□□□□ -1.09
LINC00173-202ENST00000477702 EN2P19622 333 aaPredicted RBP8.24□□□□□ -1.09
LINC00173-202ENST00000477702 ERVK-9P63128 1117 aa8.24□□□□□ -1.09
LINC00173-202ENST00000477702 DHX9Q08211 1270 aaKnown RBP8.24□□□□□ -1.09
LINC00173-202ENST00000477702 EML3Q32P44 896 aa8.24□□□□□ -1.09
LINC00173-202ENST00000477702 IL17REQ8NFR9 667 aa8.24□□□□□ -1.09
LINC00173-202ENST00000477702 DCPSQ96C86 337 aaKnown RBP8.24□□□□□ -1.09
LINC00173-202ENST00000477702 RBM17Q96I25 401 aaKnown RBP8.24□□□□□ -1.09
LINC00173-202ENST00000477702 R3HDMLQ9H3Y0 253 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms